ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:01922:01951

Extra

PDB:
ATOM 1 O3' C A1921 110.647 124.097 107.778 1.00 43.39 O
ATOM 2 P G A1922 110.326 123.967 109.343 1.00 43.69 P
ATOM 3 OP1 G A1922 109.679 125.231 109.794 1.00 45.12 O
ATOM 4 OP2 G A1922 111.564 123.490 110.019 1.00 44.19 O
ATOM 5 O5' G A1922 109.243 122.802 109.413 1.00 42.59 O
ATOM 6 C5' G A1922 108.028 122.894 108.660 1.00 42.55 C
ATOM 7 C4' G A1922 107.340 121.559 108.612 1.00 41.46 C
ATOM 8 O4' G A1922 108.254 120.568 108.084 1.00 43.07 O
ATOM 9 C3' G A1922 106.906 120.991 109.946 1.00 40.86 C
ATOM 10 O3' G A1922 105.661 121.558 110.314 1.00 40.98 O
ATOM 11 C2' G A1922 106.810 119.504 109.640 1.00 42.28 C
ATOM 12 O2' G A1922 105.641 119.182 108.916 1.00 40.67 O
ATOM 13 C1' G A1922 108.009 119.317 108.706 1.00 44.97 C
ATOM 14 N9 G A1922 109.240 118.879 109.363 1.00 47.64 N
ATOM 15 C8 G A1922 110.411 119.589 109.482 1.00 48.76 C
ATOM 16 N7 G A1922 111.352 118.928 110.096 1.00 48.94 N
ATOM 17 C5 G A1922 110.768 117.711 110.406 1.00 48.96 C
ATOM 18 C6 G A1922 111.306 116.589 111.066 1.00 51.05 C
ATOM 19 O6 G A1922 112.447 116.438 111.525 1.00 53.46 O
ATOM 20 N1 G A1922 110.370 115.565 111.175 1.00 51.11 N
ATOM 21 C2 G A1922 109.083 115.621 110.712 1.00 49.38 C
ATOM 22 N2 G A1922 108.331 114.535 110.928 1.00 48.74 N
ATOM 23 N3 G A1922 108.571 116.665 110.088 1.00 48.91 N
ATOM 24 C4 G A1922 109.463 117.667 109.969 1.00 47.86 C
ATOM 25 P U A1923 105.095 121.362 111.802 1.00 40.86 P
ATOM 26 OP1 U A1923 104.179 122.492 112.087 1.00 41.20 O
ATOM 27 OP2 U A1923 106.229 121.091 112.716 1.00 42.31 O
ATOM 28 O5' U A1923 104.217 120.041 111.706 1.00 41.60 O
TER

ATOM 1 O3' U B1950 106.405 109.421 111.193 1.00 78.25 O
ATOM 2 P G B1951 104.793 109.392 111.194 1.00 75.72 P
ATOM 3 OP1 G B1951 104.303 108.674 112.403 1.00 75.29 O
ATOM 4 OP2 G B1951 104.379 108.918 109.846 1.00 76.03 O
ATOM 5 O5' G B1951 104.373 110.921 111.362 1.00 71.53 O
ATOM 6 C5' G B1951 105.210 111.975 110.852 1.00 62.02 C
ATOM 7 C4' G B1951 104.609 112.562 109.595 1.00 54.60 C
ATOM 8 O4' G B1951 105.567 113.475 109.008 1.00 51.54 O
ATOM 9 C3' G B1951 104.293 111.561 108.491 1.00 50.90 C
ATOM 10 O3' G B1951 103.292 112.104 107.644 1.00 48.74 O
ATOM 11 C2' G B1951 105.620 111.467 107.756 1.00 49.17 C
ATOM 12 O2' G B1951 105.482 111.073 106.412 1.00 48.71 O
ATOM 13 C1' G B1951 106.112 112.908 107.835 1.00 49.27 C
ATOM 14 N9 G B1951 107.560 113.051 107.908 1.00 48.29 N
ATOM 15 C8 G B1951 108.476 112.148 108.392 1.00 47.25 C
ATOM 16 N7 G B1951 109.704 112.587 108.338 1.00 48.00 N
ATOM 17 C5 G B1951 109.590 113.852 107.781 1.00 48.48 C
ATOM 18 C6 G B1951 110.581 114.813 107.476 1.00 48.35 C
ATOM 19 O6 G B1951 111.801 114.734 107.636 1.00 49.88 O
ATOM 20 N1 G B1951 110.027 115.964 106.928 1.00 48.37 N
ATOM 21 C2 G B1951 108.689 116.164 106.697 1.00 48.07 C
ATOM 22 N2 G B1951 108.346 117.343 106.168 1.00 47.87 N
ATOM 23 N3 G B1951 107.757 115.275 106.969 1.00 48.37 N
ATOM 24 C4 G B1951 108.274 114.150 107.508 1.00 48.78 C
ATOM 25 P C B1952 101.741 111.913 108.007 1.00 48.22 P
ATOM 26 OP1 C B1952 100.997 112.913 107.210 1.00 48.63 O
ATOM 27 OP2 C B1952 101.606 111.915 109.484 1.00 49.27 O
ATOM 28 O5' C B1952 101.373 110.459 107.464 1.00 48.95 O
TER

Atoms:
OP1: (109.679,125.231,109.794)
OP2: (111.564,123.490,110.019)
C3': (106.906,120.991,109.946)
C1': (108.009,119.317,108.706)
C5': (108.028,122.894,108.660)
O6: (112.447,116.438,111.525)
O4': (108.254,120.568,108.084)
C8: (110.411,119.589,109.482)
C2: (109.083,115.621,110.712)
C6: (111.306,116.589,111.066)
C5: (110.768,117.711,110.406)
C4: (109.463,117.667,109.969)
P: (110.326,123.967,109.343)
C4': (107.340,121.559,108.612)
C2': (106.810,119.504,109.640)
O2': (105.641,119.182,108.916)
N1: (110.370,115.565,111.175)
N2: (108.331,114.535,110.928)
N3: (108.571,116.665,110.088)
N7: (111.352,118.928,110.096)
N9: (109.240,118.879,109.363)
O5': (109.243,122.802,109.413)
O3': (105.661,121.558,110.314)
OP1: (104.303,108.674,112.403)
OP2: (104.379,108.918,109.846)
C3': (104.293,111.561,108.491)
C1': (106.112,112.908,107.835)
C5': (105.210,111.975,110.852)
O6: (111.801,114.734,107.636)
O4': (105.567,113.475,109.008)
C8: (108.476,112.148,108.392)
C2: (108.689,116.164,106.697)
C6: (110.581,114.813,107.476)
C5: (109.590,113.852,107.781)
C4: (108.274,114.150,107.508)
P: (104.793,109.392,111.194)
C4': (104.609,112.562,109.595)
C2': (105.620,111.467,107.756)
O2': (105.482,111.073,106.412)
N1: (110.027,115.964,106.928)
N2: (108.346,117.343,106.168)
N3: (107.757,115.275,106.969)
N7: (109.704,112.587,108.338)
N9: (107.560,113.051,107.908)
O5': (104.373,110.921,111.362)
O3': (103.292,112.104,107.644)
Image (generated by PyMOL):
PyMOL image
show in jmol