Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:01922:01951
Extra
PDB:
ATOM 1 O3' C A1921 111.044 123.686 107.833 1.00 38.33 O
ATOM 2 P G A1922 110.580 123.532 109.365 1.00 40.37 P
ATOM 3 OP1 G A1922 109.837 124.768 109.747 1.00 41.07 O
ATOM 4 OP2 G A1922 111.753 123.102 110.169 1.00 40.17 O
ATOM 5 O5' G A1922 109.554 122.313 109.353 1.00 39.65 O
ATOM 6 C5' G A1922 108.370 122.353 108.541 1.00 39.59 C
ATOM 7 C4' G A1922 107.671 121.015 108.566 1.00 40.02 C
ATOM 8 O4' G A1922 108.564 119.986 108.066 1.00 40.24 O
ATOM 9 C3' G A1922 107.244 120.503 109.932 1.00 38.01 C
ATOM 10 O3' G A1922 106.022 121.116 110.319 1.00 38.11 O
ATOM 11 C2' G A1922 107.117 119.005 109.680 1.00 38.61 C
ATOM 12 O2' G A1922 105.930 118.649 108.995 1.00 37.17 O
ATOM 13 C1' G A1922 108.298 118.763 108.737 1.00 40.70 C
ATOM 14 N9 G A1922 109.516 118.334 109.420 1.00 42.22 N
ATOM 15 C8 G A1922 110.664 119.065 109.614 1.00 42.39 C
ATOM 16 N7 G A1922 111.586 118.404 110.255 1.00 43.52 N
ATOM 17 C5 G A1922 111.014 117.163 110.498 1.00 42.92 C
ATOM 18 C6 G A1922 111.541 116.022 111.150 1.00 44.88 C
ATOM 19 O6 G A1922 112.663 115.870 111.652 1.00 48.25 O
ATOM 20 N1 G A1922 110.618 114.980 111.183 1.00 44.17 N
ATOM 21 C2 G A1922 109.354 115.029 110.652 1.00 42.77 C
ATOM 22 N2 G A1922 108.605 113.926 110.795 1.00 40.61 N
ATOM 23 N3 G A1922 108.859 116.083 110.030 1.00 42.90 N
ATOM 24 C4 G A1922 109.736 117.107 109.993 1.00 41.84 C
ATOM 25 P U A1923 105.474 120.955 111.824 1.00 40.16 P
ATOM 26 OP1 U A1923 104.547 122.091 112.075 1.00 40.36 O
ATOM 27 OP2 U A1923 106.616 120.723 112.746 1.00 41.30 O
ATOM 28 O5' U A1923 104.601 119.623 111.782 1.00 40.09 O
TER
ATOM 1 O3' U B1950 106.789 108.775 111.198 1.00 79.94 O
ATOM 2 P G B1951 105.181 108.795 111.129 1.00 77.76 P
ATOM 3 OP1 G B1951 104.627 108.008 112.265 1.00 77.86 O
ATOM 4 OP2 G B1951 104.813 108.421 109.736 1.00 77.53 O
ATOM 5 O5' G B1951 104.798 110.324 111.377 1.00 72.14 O
ATOM 6 C5' G B1951 105.594 111.382 110.820 1.00 60.40 C
ATOM 7 C4' G B1951 104.910 111.970 109.604 1.00 54.03 C
ATOM 8 O4' G B1951 105.817 112.914 108.983 1.00 51.11 O
ATOM 9 C3' G B1951 104.574 110.976 108.497 1.00 50.10 C
ATOM 10 O3' G B1951 103.568 111.512 107.637 1.00 48.00 O
ATOM 11 C2' G B1951 105.902 110.886 107.758 1.00 48.29 C
ATOM 12 O2' G B1951 105.785 110.460 106.422 1.00 47.59 O
ATOM 13 C1' G B1951 106.388 112.335 107.825 1.00 48.42 C
ATOM 14 N9 G B1951 107.836 112.481 107.921 1.00 44.44 N
ATOM 15 C8 G B1951 108.734 111.574 108.424 1.00 43.49 C
ATOM 16 N7 G B1951 109.965 111.999 108.387 1.00 43.84 N
ATOM 17 C5 G B1951 109.875 113.262 107.823 1.00 43.55 C
ATOM 18 C6 G B1951 110.885 114.207 107.531 1.00 43.38 C
ATOM 19 O6 G B1951 112.104 114.109 107.710 1.00 43.83 O
ATOM 20 N1 G B1951 110.356 115.365 106.971 1.00 43.24 N
ATOM 21 C2 G B1951 109.026 115.582 106.716 1.00 43.42 C
ATOM 22 N2 G B1951 108.714 116.764 106.172 1.00 42.40 N
ATOM 23 N3 G B1951 108.074 114.704 106.976 1.00 42.84 N
ATOM 24 C4 G B1951 108.567 113.574 107.528 1.00 43.81 C
ATOM 25 P C B1952 102.008 111.354 108.004 1.00 47.70 P
ATOM 26 OP1 C B1952 101.284 112.330 107.153 1.00 44.68 O
ATOM 27 OP2 C B1952 101.865 111.424 109.485 1.00 47.15 O
ATOM 28 O5' C B1952 101.602 109.888 107.509 1.00 48.46 O
TER
ATOM 2 P G A1922 110.580 123.532 109.365 1.00 40.37 P
ATOM 3 OP1 G A1922 109.837 124.768 109.747 1.00 41.07 O
ATOM 4 OP2 G A1922 111.753 123.102 110.169 1.00 40.17 O
ATOM 5 O5' G A1922 109.554 122.313 109.353 1.00 39.65 O
ATOM 6 C5' G A1922 108.370 122.353 108.541 1.00 39.59 C
ATOM 7 C4' G A1922 107.671 121.015 108.566 1.00 40.02 C
ATOM 8 O4' G A1922 108.564 119.986 108.066 1.00 40.24 O
ATOM 9 C3' G A1922 107.244 120.503 109.932 1.00 38.01 C
ATOM 10 O3' G A1922 106.022 121.116 110.319 1.00 38.11 O
ATOM 11 C2' G A1922 107.117 119.005 109.680 1.00 38.61 C
ATOM 12 O2' G A1922 105.930 118.649 108.995 1.00 37.17 O
ATOM 13 C1' G A1922 108.298 118.763 108.737 1.00 40.70 C
ATOM 14 N9 G A1922 109.516 118.334 109.420 1.00 42.22 N
ATOM 15 C8 G A1922 110.664 119.065 109.614 1.00 42.39 C
ATOM 16 N7 G A1922 111.586 118.404 110.255 1.00 43.52 N
ATOM 17 C5 G A1922 111.014 117.163 110.498 1.00 42.92 C
ATOM 18 C6 G A1922 111.541 116.022 111.150 1.00 44.88 C
ATOM 19 O6 G A1922 112.663 115.870 111.652 1.00 48.25 O
ATOM 20 N1 G A1922 110.618 114.980 111.183 1.00 44.17 N
ATOM 21 C2 G A1922 109.354 115.029 110.652 1.00 42.77 C
ATOM 22 N2 G A1922 108.605 113.926 110.795 1.00 40.61 N
ATOM 23 N3 G A1922 108.859 116.083 110.030 1.00 42.90 N
ATOM 24 C4 G A1922 109.736 117.107 109.993 1.00 41.84 C
ATOM 25 P U A1923 105.474 120.955 111.824 1.00 40.16 P
ATOM 26 OP1 U A1923 104.547 122.091 112.075 1.00 40.36 O
ATOM 27 OP2 U A1923 106.616 120.723 112.746 1.00 41.30 O
ATOM 28 O5' U A1923 104.601 119.623 111.782 1.00 40.09 O
TER
ATOM 1 O3' U B1950 106.789 108.775 111.198 1.00 79.94 O
ATOM 2 P G B1951 105.181 108.795 111.129 1.00 77.76 P
ATOM 3 OP1 G B1951 104.627 108.008 112.265 1.00 77.86 O
ATOM 4 OP2 G B1951 104.813 108.421 109.736 1.00 77.53 O
ATOM 5 O5' G B1951 104.798 110.324 111.377 1.00 72.14 O
ATOM 6 C5' G B1951 105.594 111.382 110.820 1.00 60.40 C
ATOM 7 C4' G B1951 104.910 111.970 109.604 1.00 54.03 C
ATOM 8 O4' G B1951 105.817 112.914 108.983 1.00 51.11 O
ATOM 9 C3' G B1951 104.574 110.976 108.497 1.00 50.10 C
ATOM 10 O3' G B1951 103.568 111.512 107.637 1.00 48.00 O
ATOM 11 C2' G B1951 105.902 110.886 107.758 1.00 48.29 C
ATOM 12 O2' G B1951 105.785 110.460 106.422 1.00 47.59 O
ATOM 13 C1' G B1951 106.388 112.335 107.825 1.00 48.42 C
ATOM 14 N9 G B1951 107.836 112.481 107.921 1.00 44.44 N
ATOM 15 C8 G B1951 108.734 111.574 108.424 1.00 43.49 C
ATOM 16 N7 G B1951 109.965 111.999 108.387 1.00 43.84 N
ATOM 17 C5 G B1951 109.875 113.262 107.823 1.00 43.55 C
ATOM 18 C6 G B1951 110.885 114.207 107.531 1.00 43.38 C
ATOM 19 O6 G B1951 112.104 114.109 107.710 1.00 43.83 O
ATOM 20 N1 G B1951 110.356 115.365 106.971 1.00 43.24 N
ATOM 21 C2 G B1951 109.026 115.582 106.716 1.00 43.42 C
ATOM 22 N2 G B1951 108.714 116.764 106.172 1.00 42.40 N
ATOM 23 N3 G B1951 108.074 114.704 106.976 1.00 42.84 N
ATOM 24 C4 G B1951 108.567 113.574 107.528 1.00 43.81 C
ATOM 25 P C B1952 102.008 111.354 108.004 1.00 47.70 P
ATOM 26 OP1 C B1952 101.284 112.330 107.153 1.00 44.68 O
ATOM 27 OP2 C B1952 101.865 111.424 109.485 1.00 47.15 O
ATOM 28 O5' C B1952 101.602 109.888 107.509 1.00 48.46 O
TER
Atoms:
OP1: (109.837,124.768,109.747)
OP2: (111.753,123.102,110.169)
C3': (107.244,120.503,109.932)
C1': (108.298,118.763,108.737)
C5': (108.370,122.353,108.541)
O6: (112.663,115.870,111.652)
O4': (108.564,119.986,108.066)
C8: (110.664,119.065,109.614)
C2: (109.354,115.029,110.652)
C6: (111.541,116.022,111.150)
C5: (111.014,117.163,110.498)
C4: (109.736,117.107,109.993)
P: (110.580,123.532,109.365)
C4': (107.671,121.015,108.566)
C2': (107.117,119.005,109.680)
O2': (105.930,118.649,108.995)
N1: (110.618,114.980,111.183)
N2: (108.605,113.926,110.795)
N3: (108.859,116.083,110.030)
N7: (111.586,118.404,110.255)
N9: (109.516,118.334,109.420)
O5': (109.554,122.313,109.353)
O3': (106.022,121.116,110.319)
OP2: (111.753,123.102,110.169)
C3': (107.244,120.503,109.932)
C1': (108.298,118.763,108.737)
C5': (108.370,122.353,108.541)
O6: (112.663,115.870,111.652)
O4': (108.564,119.986,108.066)
C8: (110.664,119.065,109.614)
C2: (109.354,115.029,110.652)
C6: (111.541,116.022,111.150)
C5: (111.014,117.163,110.498)
C4: (109.736,117.107,109.993)
P: (110.580,123.532,109.365)
C4': (107.671,121.015,108.566)
C2': (107.117,119.005,109.680)
O2': (105.930,118.649,108.995)
N1: (110.618,114.980,111.183)
N2: (108.605,113.926,110.795)
N3: (108.859,116.083,110.030)
N7: (111.586,118.404,110.255)
N9: (109.516,118.334,109.420)
O5': (109.554,122.313,109.353)
O3': (106.022,121.116,110.319)
OP1: (104.627,108.008,112.265)
OP2: (104.813,108.421,109.736)
C3': (104.574,110.976,108.497)
C1': (106.388,112.335,107.825)
C5': (105.594,111.382,110.820)
O6: (112.104,114.109,107.710)
O4': (105.817,112.914,108.983)
C8: (108.734,111.574,108.424)
C2: (109.026,115.582,106.716)
C6: (110.885,114.207,107.531)
C5: (109.875,113.262,107.823)
C4: (108.567,113.574,107.528)
P: (105.181,108.795,111.129)
C4': (104.910,111.970,109.604)
C2': (105.902,110.886,107.758)
O2': (105.785,110.460,106.422)
N1: (110.356,115.365,106.971)
N2: (108.714,116.764,106.172)
N3: (108.074,114.704,106.976)
N7: (109.965,111.999,108.387)
N9: (107.836,112.481,107.921)
O5': (104.798,110.324,111.377)
O3': (103.568,111.512,107.637)
OP2: (104.813,108.421,109.736)
C3': (104.574,110.976,108.497)
C1': (106.388,112.335,107.825)
C5': (105.594,111.382,110.820)
O6: (112.104,114.109,107.710)
O4': (105.817,112.914,108.983)
C8: (108.734,111.574,108.424)
C2: (109.026,115.582,106.716)
C6: (110.885,114.207,107.531)
C5: (109.875,113.262,107.823)
C4: (108.567,113.574,107.528)
P: (105.181,108.795,111.129)
C4': (104.910,111.970,109.604)
C2': (105.902,110.886,107.758)
O2': (105.785,110.460,106.422)
N1: (110.356,115.365,106.971)
N2: (108.714,116.764,106.172)
N3: (108.074,114.704,106.976)
N7: (109.965,111.999,108.387)
N9: (107.836,112.481,107.921)
O5': (104.798,110.324,111.377)
O3': (103.568,111.512,107.637)
Image (generated by PyMOL):