Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:424:1342
Extra
PDB:
ATOM 1 O3' G A 23 73.129 -0.274 103.853 1.00 43.35 O
ATOM 2 P G A 24 72.797 -1.807 104.142 1.00 45.47 P
ATOM 3 OP1 G A 24 71.740 -1.801 105.188 1.00 45.49 O
ATOM 4 OP2 G A 24 74.092 -2.509 104.439 1.00 45.87 O
ATOM 5 O5' G A 24 72.236 -2.321 102.725 1.00 44.89 O
ATOM 6 C5' G A 24 70.887 -2.192 102.345 1.00 44.44 C
ATOM 7 C4' G A 24 70.705 -2.555 100.891 1.00 44.00 C
ATOM 8 O4' G A 24 71.904 -2.220 100.137 1.00 44.14 O
ATOM 9 C3' G A 24 70.501 -4.012 100.594 1.00 43.82 C
ATOM 10 O3' G A 24 69.177 -4.425 100.809 1.00 43.54 O
ATOM 11 C2' G A 24 70.938 -4.126 99.140 1.00 43.59 C
ATOM 12 O2' G A 24 69.930 -3.655 98.273 1.00 43.14 O
ATOM 13 C1' G A 24 72.094 -3.147 99.090 1.00 43.91 C
ATOM 14 N9 G A 24 73.385 -3.831 99.282 1.00 44.29 N
ATOM 15 C8 G A 24 74.241 -3.735 100.344 1.00 44.79 C
ATOM 16 N7 G A 24 75.253 -4.533 100.227 1.00 45.03 N
ATOM 17 C5 G A 24 75.126 -5.198 99.027 1.00 44.70 C
ATOM 18 C6 G A 24 75.957 -6.159 98.374 1.00 44.80 C
ATOM 19 O6 G A 24 77.034 -6.686 98.689 1.00 45.20 O
ATOM 20 N1 G A 24 75.404 -6.570 97.210 1.00 44.38 N
ATOM 21 C2 G A 24 74.222 -6.095 96.735 1.00 43.94 C
ATOM 22 N2 G A 24 73.847 -6.585 95.578 1.00 43.60 N
ATOM 23 N3 G A 24 73.432 -5.197 97.289 1.00 43.83 N
ATOM 24 C4 G A 24 73.949 -4.782 98.452 1.00 44.24 C
ATOM 25 P U A 25 68.891 -5.864 101.453 1.00 39.77 P
ATOM 26 OP1 U A 25 67.457 -5.971 101.660 1.00 39.49 O
ATOM 27 OP2 U A 25 69.791 -6.022 102.638 1.00 40.28 O
ATOM 28 O5' U A 25 69.379 -6.867 100.322 1.00 39.60 O
TER
ATOM 1 O3' A B 341 68.441 -3.404 89.041 1.00 35.22 O
ATOM 2 P G B 342 67.674 -4.106 90.221 1.00 36.29 P
ATOM 3 OP1 G B 342 67.394 -5.539 89.835 1.00 36.15 O
ATOM 4 OP2 G B 342 66.609 -3.256 90.528 1.00 36.23 O
ATOM 5 O5' G B 342 68.728 -3.994 91.416 1.00 36.65 O
ATOM 6 C5' G B 342 69.511 -5.084 91.831 1.00 36.81 C
ATOM 7 C4' G B 342 70.254 -4.745 93.082 1.00 37.16 C
ATOM 8 O4' G B 342 70.747 -3.385 93.012 1.00 37.26 O
ATOM 9 C3' G B 342 69.450 -4.716 94.331 1.00 37.30 C
ATOM 10 O3' G B 342 69.096 -5.980 94.776 1.00 37.31 O
ATOM 11 C2' G B 342 70.367 -3.963 95.271 1.00 37.64 C
ATOM 12 O2' G B 342 71.468 -4.775 95.618 1.00 37.86 O
ATOM 13 C1' G B 342 70.890 -2.875 94.333 1.00 37.56 C
ATOM 14 N9 G B 342 70.128 -1.617 94.455 1.00 37.53 N
ATOM 15 C8 G B 342 69.230 -1.230 93.559 1.00 37.24 C
ATOM 16 N7 G B 342 68.682 -0.114 93.855 1.00 37.28 N
ATOM 17 C5 G B 342 69.264 0.261 95.023 1.00 37.62 C
ATOM 18 C6 G B 342 69.026 1.441 95.785 1.00 37.82 C
ATOM 19 O6 G B 342 68.201 2.337 95.510 1.00 37.71 O
ATOM 20 N1 G B 342 69.830 1.543 96.893 1.00 38.18 N
ATOM 21 C2 G B 342 70.725 0.581 97.214 1.00 38.32 C
ATOM 22 N2 G B 342 71.387 0.808 98.367 1.00 38.70 N
ATOM 23 N3 G B 342 70.954 -0.524 96.488 1.00 38.13 N
ATOM 24 C4 G B 342 70.183 -0.637 95.398 1.00 37.78 C
ATOM 25 P C B 343 67.581 -6.240 95.116 1.00 37.75 P
ATOM 26 OP1 C B 343 67.443 -7.642 95.563 1.00 37.81 O
ATOM 27 OP2 C B 343 66.822 -5.788 93.941 1.00 37.42 O
ATOM 28 O5' C B 343 67.318 -5.246 96.339 1.00 37.99 O
TER
ATOM 2 P G A 24 72.797 -1.807 104.142 1.00 45.47 P
ATOM 3 OP1 G A 24 71.740 -1.801 105.188 1.00 45.49 O
ATOM 4 OP2 G A 24 74.092 -2.509 104.439 1.00 45.87 O
ATOM 5 O5' G A 24 72.236 -2.321 102.725 1.00 44.89 O
ATOM 6 C5' G A 24 70.887 -2.192 102.345 1.00 44.44 C
ATOM 7 C4' G A 24 70.705 -2.555 100.891 1.00 44.00 C
ATOM 8 O4' G A 24 71.904 -2.220 100.137 1.00 44.14 O
ATOM 9 C3' G A 24 70.501 -4.012 100.594 1.00 43.82 C
ATOM 10 O3' G A 24 69.177 -4.425 100.809 1.00 43.54 O
ATOM 11 C2' G A 24 70.938 -4.126 99.140 1.00 43.59 C
ATOM 12 O2' G A 24 69.930 -3.655 98.273 1.00 43.14 O
ATOM 13 C1' G A 24 72.094 -3.147 99.090 1.00 43.91 C
ATOM 14 N9 G A 24 73.385 -3.831 99.282 1.00 44.29 N
ATOM 15 C8 G A 24 74.241 -3.735 100.344 1.00 44.79 C
ATOM 16 N7 G A 24 75.253 -4.533 100.227 1.00 45.03 N
ATOM 17 C5 G A 24 75.126 -5.198 99.027 1.00 44.70 C
ATOM 18 C6 G A 24 75.957 -6.159 98.374 1.00 44.80 C
ATOM 19 O6 G A 24 77.034 -6.686 98.689 1.00 45.20 O
ATOM 20 N1 G A 24 75.404 -6.570 97.210 1.00 44.38 N
ATOM 21 C2 G A 24 74.222 -6.095 96.735 1.00 43.94 C
ATOM 22 N2 G A 24 73.847 -6.585 95.578 1.00 43.60 N
ATOM 23 N3 G A 24 73.432 -5.197 97.289 1.00 43.83 N
ATOM 24 C4 G A 24 73.949 -4.782 98.452 1.00 44.24 C
ATOM 25 P U A 25 68.891 -5.864 101.453 1.00 39.77 P
ATOM 26 OP1 U A 25 67.457 -5.971 101.660 1.00 39.49 O
ATOM 27 OP2 U A 25 69.791 -6.022 102.638 1.00 40.28 O
ATOM 28 O5' U A 25 69.379 -6.867 100.322 1.00 39.60 O
TER
ATOM 1 O3' A B 341 68.441 -3.404 89.041 1.00 35.22 O
ATOM 2 P G B 342 67.674 -4.106 90.221 1.00 36.29 P
ATOM 3 OP1 G B 342 67.394 -5.539 89.835 1.00 36.15 O
ATOM 4 OP2 G B 342 66.609 -3.256 90.528 1.00 36.23 O
ATOM 5 O5' G B 342 68.728 -3.994 91.416 1.00 36.65 O
ATOM 6 C5' G B 342 69.511 -5.084 91.831 1.00 36.81 C
ATOM 7 C4' G B 342 70.254 -4.745 93.082 1.00 37.16 C
ATOM 8 O4' G B 342 70.747 -3.385 93.012 1.00 37.26 O
ATOM 9 C3' G B 342 69.450 -4.716 94.331 1.00 37.30 C
ATOM 10 O3' G B 342 69.096 -5.980 94.776 1.00 37.31 O
ATOM 11 C2' G B 342 70.367 -3.963 95.271 1.00 37.64 C
ATOM 12 O2' G B 342 71.468 -4.775 95.618 1.00 37.86 O
ATOM 13 C1' G B 342 70.890 -2.875 94.333 1.00 37.56 C
ATOM 14 N9 G B 342 70.128 -1.617 94.455 1.00 37.53 N
ATOM 15 C8 G B 342 69.230 -1.230 93.559 1.00 37.24 C
ATOM 16 N7 G B 342 68.682 -0.114 93.855 1.00 37.28 N
ATOM 17 C5 G B 342 69.264 0.261 95.023 1.00 37.62 C
ATOM 18 C6 G B 342 69.026 1.441 95.785 1.00 37.82 C
ATOM 19 O6 G B 342 68.201 2.337 95.510 1.00 37.71 O
ATOM 20 N1 G B 342 69.830 1.543 96.893 1.00 38.18 N
ATOM 21 C2 G B 342 70.725 0.581 97.214 1.00 38.32 C
ATOM 22 N2 G B 342 71.387 0.808 98.367 1.00 38.70 N
ATOM 23 N3 G B 342 70.954 -0.524 96.488 1.00 38.13 N
ATOM 24 C4 G B 342 70.183 -0.637 95.398 1.00 37.78 C
ATOM 25 P C B 343 67.581 -6.240 95.116 1.00 37.75 P
ATOM 26 OP1 C B 343 67.443 -7.642 95.563 1.00 37.81 O
ATOM 27 OP2 C B 343 66.822 -5.788 93.941 1.00 37.42 O
ATOM 28 O5' C B 343 67.318 -5.246 96.339 1.00 37.99 O
TER
Atoms:
OP1: (71.740,-1.801,105.188)
OP2: (74.092,-2.509,104.439)
C3': (70.501,-4.012,100.594)
C1': (72.094,-3.147,99.090)
C5': (70.887,-2.192,102.345)
O6: (77.034,-6.686,98.689)
O4': (71.904,-2.220,100.137)
C8: (74.241,-3.735,100.344)
C2: (74.222,-6.095,96.735)
C6: (75.957,-6.159,98.374)
C5: (75.126,-5.198,99.027)
C4: (73.949,-4.782,98.452)
P: (72.797,-1.807,104.142)
C4': (70.705,-2.555,100.891)
C2': (70.938,-4.126,99.140)
O2': (69.930,-3.655,98.273)
N1: (75.404,-6.570,97.210)
N2: (73.847,-6.585,95.578)
N3: (73.432,-5.197,97.289)
N7: (75.253,-4.533,100.227)
N9: (73.385,-3.831,99.282)
O5': (72.236,-2.321,102.725)
O3': (69.177,-4.425,100.809)
OP2: (74.092,-2.509,104.439)
C3': (70.501,-4.012,100.594)
C1': (72.094,-3.147,99.090)
C5': (70.887,-2.192,102.345)
O6: (77.034,-6.686,98.689)
O4': (71.904,-2.220,100.137)
C8: (74.241,-3.735,100.344)
C2: (74.222,-6.095,96.735)
C6: (75.957,-6.159,98.374)
C5: (75.126,-5.198,99.027)
C4: (73.949,-4.782,98.452)
P: (72.797,-1.807,104.142)
C4': (70.705,-2.555,100.891)
C2': (70.938,-4.126,99.140)
O2': (69.930,-3.655,98.273)
N1: (75.404,-6.570,97.210)
N2: (73.847,-6.585,95.578)
N3: (73.432,-5.197,97.289)
N7: (75.253,-4.533,100.227)
N9: (73.385,-3.831,99.282)
O5': (72.236,-2.321,102.725)
O3': (69.177,-4.425,100.809)
OP1: (67.394,-5.539,89.835)
OP2: (66.609,-3.256,90.528)
C3': (69.450,-4.716,94.331)
C1': (70.890,-2.875,94.333)
C5': (69.511,-5.084,91.831)
O6: (68.201,2.337,95.510)
O4': (70.747,-3.385,93.012)
C8: (69.230,-1.230,93.559)
C2: (70.725,0.581,97.214)
C6: (69.026,1.441,95.785)
C5: (69.264,0.261,95.023)
C4: (70.183,-0.637,95.398)
P: (67.674,-4.106,90.221)
C4': (70.254,-4.745,93.082)
C2': (70.367,-3.963,95.271)
O2': (71.468,-4.775,95.618)
N1: (69.830,1.543,96.893)
N2: (71.387,0.808,98.367)
N3: (70.954,-0.524,96.488)
N7: (68.682,-0.114,93.855)
N9: (70.128,-1.617,94.455)
O5': (68.728,-3.994,91.416)
O3': (69.096,-5.980,94.776)
OP2: (66.609,-3.256,90.528)
C3': (69.450,-4.716,94.331)
C1': (70.890,-2.875,94.333)
C5': (69.511,-5.084,91.831)
O6: (68.201,2.337,95.510)
O4': (70.747,-3.385,93.012)
C8: (69.230,-1.230,93.559)
C2: (70.725,0.581,97.214)
C6: (69.026,1.441,95.785)
C5: (69.264,0.261,95.023)
C4: (70.183,-0.637,95.398)
P: (67.674,-4.106,90.221)
C4': (70.254,-4.745,93.082)
C2': (70.367,-3.963,95.271)
O2': (71.468,-4.775,95.618)
N1: (69.830,1.543,96.893)
N2: (71.387,0.808,98.367)
N3: (70.954,-0.524,96.488)
N7: (68.682,-0.114,93.855)
N9: (70.128,-1.617,94.455)
O5': (68.728,-3.994,91.416)
O3': (69.096,-5.980,94.776)
Image (generated by PyMOL):