ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1H4Q:T15:T55

Extra

PDB:
ATOM 1 O3' C A 14 -4.669 56.932 113.669 1.00 95.37 O
ATOM 2 P G A 15 -4.650 56.988 115.280 1.00 87.64 P
ATOM 3 OP1 G A 15 -4.246 55.657 115.808 1.00 84.64 O
ATOM 4 OP2 G A 15 -5.880 57.645 115.786 1.00 86.17 O
ATOM 5 O5' G A 15 -3.433 57.965 115.540 1.00 78.92 O
ATOM 6 C5' G A 15 -2.207 57.753 114.864 1.00 69.97 C
ATOM 7 C4' G A 15 -1.515 59.062 114.648 1.00 64.20 C
ATOM 8 O4' G A 15 -1.906 59.959 115.699 1.00 61.94 O
ATOM 9 C3' G A 15 -0.010 58.907 114.745 1.00 64.14 C
ATOM 10 O3' G A 15 0.668 59.571 113.691 1.00 60.47 O
ATOM 11 C2' G A 15 0.352 59.284 116.179 1.00 61.71 C
ATOM 12 O2' G A 15 1.487 60.110 116.258 1.00 74.70 O
ATOM 13 C1' G A 15 -0.829 60.164 116.577 1.00 57.84 C
ATOM 14 N9 G A 15 -1.318 60.050 117.939 1.00 48.40 N
ATOM 15 C8 G A 15 -2.165 59.107 118.463 1.00 45.91 C
ATOM 16 N7 G A 15 -2.484 59.347 119.705 1.00 48.29 N
ATOM 17 C5 G A 15 -1.786 60.506 120.017 1.00 45.16 C
ATOM 18 C6 G A 15 -1.732 61.251 121.216 1.00 44.47 C
ATOM 19 O6 G A 15 -2.306 61.030 122.284 1.00 44.59 O
ATOM 20 N1 G A 15 -0.894 62.357 121.091 1.00 44.80 N
ATOM 21 C2 G A 15 -0.190 62.693 119.960 1.00 41.81 C
ATOM 22 N2 G A 15 0.577 63.793 120.033 1.00 39.49 N
ATOM 23 N3 G A 15 -0.232 62.003 118.841 1.00 39.79 N
ATOM 24 C4 G A 15 -1.046 60.933 118.941 1.00 44.94 C
ATOM 25 P G A 16 1.889 58.861 112.957 1.00 64.97 P
ATOM 26 OP1 G A 16 2.216 59.725 111.793 1.00 69.19 O
ATOM 27 OP2 G A 16 1.504 57.440 112.740 1.00 63.16 O
ATOM 28 O5' G A 16 3.091 58.947 114.005 1.00 68.28 O
TER

ATOM 1 O3' A B 54 4.350 65.670 121.000 1.00 52.13 O
ATOM 2 P G B 55 3.224 66.749 120.644 1.00 52.85 P
ATOM 3 OP1 G B 55 3.882 67.957 120.086 1.00 51.31 O
ATOM 4 OP2 G B 55 2.408 66.863 121.882 1.00 50.57 O
ATOM 5 O5' G B 55 2.388 66.064 119.466 1.00 50.64 O
ATOM 6 C5' G B 55 3.025 65.652 118.254 1.00 47.55 C
ATOM 7 C4' G B 55 2.127 65.904 117.058 1.00 50.55 C
ATOM 8 O4' G B 55 0.838 65.281 117.282 1.00 53.50 O
ATOM 9 C3' G B 55 1.847 67.390 116.871 1.00 51.66 C
ATOM 10 O3' G B 55 1.787 67.720 115.488 1.00 53.76 O
ATOM 11 C2' G B 55 0.505 67.642 117.550 1.00 52.82 C
ATOM 12 O2' G B 55 -0.287 68.554 116.829 1.00 59.25 O
ATOM 13 C1' G B 55 -0.152 66.268 117.430 1.00 50.55 C
ATOM 14 N9 G B 55 -1.121 65.844 118.431 1.00 48.92 N
ATOM 15 C8 G B 55 -1.365 66.394 119.666 1.00 47.23 C
ATOM 16 N7 G B 55 -2.324 65.785 120.311 1.00 47.55 N
ATOM 17 C5 G B 55 -2.729 64.772 119.451 1.00 47.58 C
ATOM 18 C6 G B 55 -3.733 63.777 119.606 1.00 51.12 C
ATOM 19 O6 G B 55 -4.498 63.597 120.565 1.00 58.44 O
ATOM 20 N1 G B 55 -3.804 62.941 118.494 1.00 47.17 N
ATOM 21 C2 G B 55 -3.016 63.055 117.376 1.00 52.11 C
ATOM 22 N2 G B 55 -3.236 62.160 116.403 1.00 55.81 N
ATOM 23 N3 G B 55 -2.079 63.980 117.218 1.00 47.42 N
ATOM 24 C4 G B 55 -1.993 64.796 118.290 1.00 46.56 C
ATOM 25 P A B 56 3.030 68.399 114.744 1.00 56.08 P
ATOM 26 OP1 A B 56 3.839 67.316 114.119 1.00 50.44 O
ATOM 27 OP2 A B 56 3.674 69.392 115.642 1.00 55.40 O
ATOM 28 O5' A B 56 2.330 69.203 113.568 1.00 59.25 O
TER

Atoms:
OP1: (-4.246,55.657,115.808)
OP2: (-5.880,57.645,115.786)
C3': (-0.010,58.907,114.745)
C1': (-0.829,60.164,116.577)
C5': (-2.207,57.753,114.864)
O6: (-2.306,61.030,122.284)
O4': (-1.906,59.959,115.699)
C8: (-2.165,59.107,118.463)
C2: (-0.190,62.693,119.960)
C6: (-1.732,61.251,121.216)
C5: (-1.786,60.506,120.017)
C4: (-1.046,60.933,118.941)
P: (-4.650,56.988,115.280)
C4': (-1.515,59.062,114.648)
C2': (0.352,59.284,116.179)
O2': (1.487,60.110,116.258)
N1: (-0.894,62.357,121.091)
N2: (0.577,63.793,120.033)
N3: (-0.232,62.003,118.841)
N7: (-2.484,59.347,119.705)
N9: (-1.318,60.050,117.939)
O5': (-3.433,57.965,115.540)
O3': (0.668,59.571,113.691)
OP1: (3.882,67.957,120.086)
OP2: (2.408,66.863,121.882)
C3': (1.847,67.390,116.871)
C1': (-0.152,66.268,117.430)
C5': (3.025,65.652,118.254)
O6: (-4.498,63.597,120.565)
O4': (0.838,65.281,117.282)
C8: (-1.365,66.394,119.666)
C2: (-3.016,63.055,117.376)
C6: (-3.733,63.777,119.606)
C5: (-2.729,64.772,119.451)
C4: (-1.993,64.796,118.290)
P: (3.224,66.749,120.644)
C4': (2.127,65.904,117.058)
C2': (0.505,67.642,117.550)
O2': (-0.287,68.554,116.829)
N1: (-3.804,62.941,118.494)
N2: (-3.236,62.160,116.403)
N3: (-2.079,63.980,117.218)
N7: (-2.324,65.785,120.311)
N9: (-1.121,65.844,118.431)
O5': (2.388,66.064,119.466)
O3': (1.787,67.720,115.488)
Image (generated by PyMOL):
PyMOL image
show in jmol