ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J02:A484:A6

Extra

PDB:
ATOM 1 O3' G A 483 -105.039 36.252 -45.169 1.00 13.99 O
ATOM 2 P G A 484 -103.679 36.693 -45.889 1.00 29.69 P
ATOM 3 OP1 G A 484 -103.915 38.057 -46.435 1.00 56.62 O
ATOM 4 OP2 G A 484 -103.246 35.607 -46.800 1.00 55.88 O
ATOM 5 O5' G A 484 -102.642 36.799 -44.688 1.00 25.76 O
ATOM 6 C5' G A 484 -102.798 37.817 -43.677 1.00 24.74 C
ATOM 7 C4' G A 484 -101.642 37.782 -42.709 1.00 25.07 C
ATOM 8 O4' G A 484 -101.708 36.590 -41.889 1.00 23.35 O
ATOM 9 C3' G A 484 -100.282 37.740 -43.369 1.00 25.87 C
ATOM 10 O3' G A 484 -99.861 39.062 -43.626 1.00 26.57 O
ATOM 11 C2' G A 484 -99.408 37.056 -42.326 1.00 25.27 C
ATOM 12 O2' G A 484 -98.910 37.971 -41.377 1.00 25.67 O
ATOM 13 C1' G A 484 -100.401 36.110 -41.641 1.00 24.14 C
ATOM 14 N9 G A 484 -100.325 34.728 -42.104 1.00 33.35 N
ATOM 15 C8 G A 484 -101.192 34.094 -42.963 1.00 33.84 C
ATOM 16 N7 G A 484 -100.857 32.857 -43.206 1.00 33.42 N
ATOM 17 C5 G A 484 -99.702 32.663 -42.465 1.00 33.15 C
ATOM 18 C6 G A 484 -98.888 31.526 -42.342 1.00 34.45 C
ATOM 19 O6 G A 484 -99.016 30.434 -42.895 1.00 35.33 O
ATOM 20 N1 G A 484 -97.826 31.749 -41.474 1.00 33.88 N
ATOM 21 C2 G A 484 -97.583 32.920 -40.818 1.00 33.94 C
ATOM 22 N2 G A 484 -96.523 32.925 -40.015 1.00 35.51 N
ATOM 23 N3 G A 484 -98.328 34.001 -40.937 1.00 33.50 N
ATOM 24 C4 G A 484 -99.366 33.803 -41.770 1.00 33.15 C
ATOM 25 P C A 485 -99.103 39.398 -44.994 1.00 29.06 P
ATOM 26 OP1 C A 485 -98.898 40.874 -45.000 1.00 24.13 O
ATOM 27 OP2 C A 485 -99.827 38.752 -46.118 1.00 23.44 O
ATOM 28 O5' C A 485 -97.683 38.707 -44.807 1.00 23.95 O
TER

ATOM 1 O3' A B 5 -92.251 41.064 -39.919 1.00 12.71 O
ATOM 2 P G B 6 -92.672 40.827 -38.391 1.00 28.47 P
ATOM 3 OP1 G B 6 -93.875 41.646 -38.098 1.00 51.92 O
ATOM 4 OP2 G B 6 -91.448 41.007 -37.575 1.00 50.51 O
ATOM 5 O5' G B 6 -93.097 39.288 -38.352 1.00 34.10 O
ATOM 6 C5' G B 6 -94.284 38.834 -39.037 1.00 32.92 C
ATOM 7 C4' G B 6 -94.484 37.353 -38.832 1.00 31.89 C
ATOM 8 O4' G B 6 -93.378 36.637 -39.430 1.00 31.31 O
ATOM 9 C3' G B 6 -94.496 36.889 -37.388 1.00 31.70 C
ATOM 10 O3' G B 6 -95.761 37.016 -36.768 1.00 33.02 O
ATOM 11 C2' G B 6 -94.060 35.437 -37.490 1.00 31.31 C
ATOM 12 O2' G B 6 -95.123 34.574 -37.831 1.00 31.92 O
ATOM 13 C1' G B 6 -93.068 35.497 -38.646 1.00 31.20 C
ATOM 14 N9 G B 6 -91.688 35.607 -38.189 1.00 46.21 N
ATOM 15 C8 G B 6 -90.881 36.711 -38.259 1.00 46.38 C
ATOM 16 N7 G B 6 -89.679 36.497 -37.800 1.00 46.89 N
ATOM 17 C5 G B 6 -89.697 35.176 -37.392 1.00 45.82 C
ATOM 18 C6 G B 6 -88.684 34.394 -36.818 1.00 46.05 C
ATOM 19 O6 G B 6 -87.529 34.724 -36.541 1.00 48.39 O
ATOM 20 N1 G B 6 -89.121 33.103 -36.559 1.00 45.10 N
ATOM 21 C2 G B 6 -90.380 32.629 -36.822 1.00 44.83 C
ATOM 22 N2 G B 6 -90.614 31.348 -36.508 1.00 44.01 N
ATOM 23 N3 G B 6 -91.341 33.357 -37.357 1.00 45.78 N
ATOM 24 C4 G B 6 -90.931 34.612 -37.617 1.00 45.57 C
ATOM 25 P U B 7 -95.822 37.411 -35.215 1.00 26.32 P
ATOM 26 OP1 U B 7 -97.247 37.574 -34.840 1.00 44.06 O
ATOM 27 OP2 U B 7 -94.858 38.530 -35.001 1.00 41.62 O
ATOM 28 O5' U B 7 -95.259 36.136 -34.450 1.00 33.76 O
TER

Atoms:
OP1: (-103.915,38.057,-46.435)
OP2: (-103.246,35.607,-46.800)
C3': (-100.282,37.740,-43.369)
C1': (-100.401,36.110,-41.641)
C5': (-102.798,37.817,-43.677)
O6: (-99.016,30.434,-42.895)
O4': (-101.708,36.590,-41.889)
C8: (-101.192,34.094,-42.963)
C2: (-97.583,32.920,-40.818)
C6: (-98.888,31.526,-42.342)
C5: (-99.702,32.663,-42.465)
C4: (-99.366,33.803,-41.770)
P: (-103.679,36.693,-45.889)
C4': (-101.642,37.782,-42.709)
C2': (-99.408,37.056,-42.326)
O2': (-98.910,37.971,-41.377)
N1: (-97.826,31.749,-41.474)
N2: (-96.523,32.925,-40.015)
N3: (-98.328,34.001,-40.937)
N7: (-100.857,32.857,-43.206)
N9: (-100.325,34.728,-42.104)
O5': (-102.642,36.799,-44.688)
O3': (-99.861,39.062,-43.626)
OP1: (-93.875,41.646,-38.098)
OP2: (-91.448,41.007,-37.575)
C3': (-94.496,36.889,-37.388)
C1': (-93.068,35.497,-38.646)
C5': (-94.284,38.834,-39.037)
O6: (-87.529,34.724,-36.541)
O4': (-93.378,36.637,-39.430)
C8: (-90.881,36.711,-38.259)
C2: (-90.380,32.629,-36.822)
C6: (-88.684,34.394,-36.818)
C5: (-89.697,35.176,-37.392)
C4: (-90.931,34.612,-37.617)
P: (-92.672,40.827,-38.391)
C4': (-94.484,37.353,-38.832)
C2': (-94.060,35.437,-37.490)
O2': (-95.123,34.574,-37.831)
N1: (-89.121,33.103,-36.559)
N2: (-90.614,31.348,-36.508)
N3: (-91.341,33.357,-37.357)
N7: (-89.679,36.497,-37.800)
N9: (-91.688,35.607,-38.189)
O5': (-93.097,39.288,-38.352)
O3': (-95.761,37.016,-36.768)
Image (generated by PyMOL):
PyMOL image
show in jmol