Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2DLC:Y54:Y17
Extra
PDB:
ATOM 1 O3' C A 53 16.745 -6.544 114.665 1.00 34.41 O
ATOM 2 P G A 54 16.948 -5.878 116.109 1.00 35.04 P
ATOM 3 OP1 G A 54 17.692 -4.610 115.925 1.00 35.55 O
ATOM 4 OP2 G A 54 17.507 -6.927 116.990 1.00 35.00 O
ATOM 5 O5' G A 54 15.459 -5.559 116.615 1.00 34.56 O
ATOM 6 C5' G A 54 14.784 -4.349 116.261 1.00 33.91 C
ATOM 7 C4' G A 54 13.405 -4.276 116.900 1.00 33.58 C
ATOM 8 O4' G A 54 12.617 -5.429 116.506 1.00 33.41 O
ATOM 9 C3' G A 54 13.375 -4.304 118.424 1.00 33.26 C
ATOM 10 O3' G A 54 13.558 -2.999 118.966 1.00 33.34 O
ATOM 11 C2' G A 54 11.974 -4.835 118.713 1.00 33.06 C
ATOM 12 O2' G A 54 10.975 -3.832 118.688 1.00 32.64 O
ATOM 13 C1' G A 54 11.775 -5.827 117.575 1.00 33.14 C
ATOM 14 N9 G A 54 12.092 -7.200 117.966 1.00 33.06 N
ATOM 15 C8 G A 54 13.226 -7.914 117.661 1.00 33.06 C
ATOM 16 N7 G A 54 13.227 -9.123 118.149 1.00 33.14 N
ATOM 17 C5 G A 54 12.016 -9.221 118.823 1.00 32.94 C
ATOM 18 C6 G A 54 11.455 -10.300 119.552 1.00 32.72 C
ATOM 19 O6 G A 54 11.943 -11.423 119.747 1.00 32.72 O
ATOM 20 N1 G A 54 10.201 -9.983 120.081 1.00 32.45 N
ATOM 21 C2 G A 54 9.570 -8.768 119.923 1.00 32.27 C
ATOM 22 N2 G A 54 8.370 -8.629 120.500 1.00 32.01 N
ATOM 23 N3 G A 54 10.086 -7.751 119.243 1.00 32.57 N
ATOM 24 C4 G A 54 11.306 -8.043 118.721 1.00 32.93 C
TER
ATOM 1 P G B 17 5.147 -7.996 124.117 1.00 32.10 P
ATOM 2 OP1 G B 17 5.397 -7.087 125.258 1.00 32.02 O
ATOM 3 OP2 G B 17 4.137 -9.071 124.236 1.00 31.85 O
ATOM 4 O5' G B 17 4.761 -7.126 122.830 1.00 32.22 O
ATOM 5 C5' G B 17 5.579 -6.045 122.378 1.00 32.35 C
ATOM 6 C4' G B 17 5.252 -5.654 120.941 1.00 32.50 C
ATOM 7 O4' G B 17 5.964 -6.518 120.017 1.00 32.47 O
ATOM 8 C3' G B 17 3.780 -5.721 120.535 1.00 32.58 C
ATOM 9 O3' G B 17 3.451 -4.600 119.715 1.00 32.57 O
ATOM 10 C2' G B 17 3.693 -7.040 119.762 1.00 32.76 C
ATOM 11 O2' G B 17 2.658 -7.049 118.798 1.00 32.97 O
ATOM 12 C1' G B 17 5.062 -7.088 119.087 1.00 32.74 C
ATOM 13 N9 G B 17 5.580 -8.418 118.756 1.00 32.72 N
ATOM 14 C8 G B 17 5.144 -9.640 119.220 1.00 32.71 C
ATOM 15 N7 G B 17 5.817 -10.652 118.748 1.00 32.51 N
ATOM 16 C5 G B 17 6.767 -10.068 117.921 1.00 32.53 C
ATOM 17 C6 G B 17 7.783 -10.665 117.136 1.00 32.46 C
ATOM 18 O6 G B 17 8.043 -11.869 117.022 1.00 32.78 O
ATOM 19 N1 G B 17 8.539 -9.719 116.438 1.00 32.33 N
ATOM 20 C2 G B 17 8.333 -8.358 116.495 1.00 32.30 C
ATOM 21 N2 G B 17 9.154 -7.595 115.760 1.00 32.19 N
ATOM 22 N3 G B 17 7.383 -7.786 117.228 1.00 32.46 N
ATOM 23 C4 G B 17 6.636 -8.695 117.913 1.00 32.59 C
TER
ATOM 2 P G A 54 16.948 -5.878 116.109 1.00 35.04 P
ATOM 3 OP1 G A 54 17.692 -4.610 115.925 1.00 35.55 O
ATOM 4 OP2 G A 54 17.507 -6.927 116.990 1.00 35.00 O
ATOM 5 O5' G A 54 15.459 -5.559 116.615 1.00 34.56 O
ATOM 6 C5' G A 54 14.784 -4.349 116.261 1.00 33.91 C
ATOM 7 C4' G A 54 13.405 -4.276 116.900 1.00 33.58 C
ATOM 8 O4' G A 54 12.617 -5.429 116.506 1.00 33.41 O
ATOM 9 C3' G A 54 13.375 -4.304 118.424 1.00 33.26 C
ATOM 10 O3' G A 54 13.558 -2.999 118.966 1.00 33.34 O
ATOM 11 C2' G A 54 11.974 -4.835 118.713 1.00 33.06 C
ATOM 12 O2' G A 54 10.975 -3.832 118.688 1.00 32.64 O
ATOM 13 C1' G A 54 11.775 -5.827 117.575 1.00 33.14 C
ATOM 14 N9 G A 54 12.092 -7.200 117.966 1.00 33.06 N
ATOM 15 C8 G A 54 13.226 -7.914 117.661 1.00 33.06 C
ATOM 16 N7 G A 54 13.227 -9.123 118.149 1.00 33.14 N
ATOM 17 C5 G A 54 12.016 -9.221 118.823 1.00 32.94 C
ATOM 18 C6 G A 54 11.455 -10.300 119.552 1.00 32.72 C
ATOM 19 O6 G A 54 11.943 -11.423 119.747 1.00 32.72 O
ATOM 20 N1 G A 54 10.201 -9.983 120.081 1.00 32.45 N
ATOM 21 C2 G A 54 9.570 -8.768 119.923 1.00 32.27 C
ATOM 22 N2 G A 54 8.370 -8.629 120.500 1.00 32.01 N
ATOM 23 N3 G A 54 10.086 -7.751 119.243 1.00 32.57 N
ATOM 24 C4 G A 54 11.306 -8.043 118.721 1.00 32.93 C
TER
ATOM 1 P G B 17 5.147 -7.996 124.117 1.00 32.10 P
ATOM 2 OP1 G B 17 5.397 -7.087 125.258 1.00 32.02 O
ATOM 3 OP2 G B 17 4.137 -9.071 124.236 1.00 31.85 O
ATOM 4 O5' G B 17 4.761 -7.126 122.830 1.00 32.22 O
ATOM 5 C5' G B 17 5.579 -6.045 122.378 1.00 32.35 C
ATOM 6 C4' G B 17 5.252 -5.654 120.941 1.00 32.50 C
ATOM 7 O4' G B 17 5.964 -6.518 120.017 1.00 32.47 O
ATOM 8 C3' G B 17 3.780 -5.721 120.535 1.00 32.58 C
ATOM 9 O3' G B 17 3.451 -4.600 119.715 1.00 32.57 O
ATOM 10 C2' G B 17 3.693 -7.040 119.762 1.00 32.76 C
ATOM 11 O2' G B 17 2.658 -7.049 118.798 1.00 32.97 O
ATOM 12 C1' G B 17 5.062 -7.088 119.087 1.00 32.74 C
ATOM 13 N9 G B 17 5.580 -8.418 118.756 1.00 32.72 N
ATOM 14 C8 G B 17 5.144 -9.640 119.220 1.00 32.71 C
ATOM 15 N7 G B 17 5.817 -10.652 118.748 1.00 32.51 N
ATOM 16 C5 G B 17 6.767 -10.068 117.921 1.00 32.53 C
ATOM 17 C6 G B 17 7.783 -10.665 117.136 1.00 32.46 C
ATOM 18 O6 G B 17 8.043 -11.869 117.022 1.00 32.78 O
ATOM 19 N1 G B 17 8.539 -9.719 116.438 1.00 32.33 N
ATOM 20 C2 G B 17 8.333 -8.358 116.495 1.00 32.30 C
ATOM 21 N2 G B 17 9.154 -7.595 115.760 1.00 32.19 N
ATOM 22 N3 G B 17 7.383 -7.786 117.228 1.00 32.46 N
ATOM 23 C4 G B 17 6.636 -8.695 117.913 1.00 32.59 C
TER
Atoms:
OP1: (17.692,-4.610,115.925)
OP2: (17.507,-6.927,116.990)
C3': (13.375,-4.304,118.424)
C1': (11.775,-5.827,117.575)
C5': (14.784,-4.349,116.261)
O6: (11.943,-11.423,119.747)
O4': (12.617,-5.429,116.506)
C8: (13.226,-7.914,117.661)
C2: (9.570,-8.768,119.923)
C6: (11.455,-10.300,119.552)
C5: (12.016,-9.221,118.823)
C4: (11.306,-8.043,118.721)
P: (16.948,-5.878,116.109)
C4': (13.405,-4.276,116.900)
C2': (11.974,-4.835,118.713)
O2': (10.975,-3.832,118.688)
N1: (10.201,-9.983,120.081)
N2: (8.370,-8.629,120.500)
N3: (10.086,-7.751,119.243)
N7: (13.227,-9.123,118.149)
N9: (12.092,-7.200,117.966)
O5': (15.459,-5.559,116.615)
O3': (13.558,-2.999,118.966)
OP2: (17.507,-6.927,116.990)
C3': (13.375,-4.304,118.424)
C1': (11.775,-5.827,117.575)
C5': (14.784,-4.349,116.261)
O6: (11.943,-11.423,119.747)
O4': (12.617,-5.429,116.506)
C8: (13.226,-7.914,117.661)
C2: (9.570,-8.768,119.923)
C6: (11.455,-10.300,119.552)
C5: (12.016,-9.221,118.823)
C4: (11.306,-8.043,118.721)
P: (16.948,-5.878,116.109)
C4': (13.405,-4.276,116.900)
C2': (11.974,-4.835,118.713)
O2': (10.975,-3.832,118.688)
N1: (10.201,-9.983,120.081)
N2: (8.370,-8.629,120.500)
N3: (10.086,-7.751,119.243)
N7: (13.227,-9.123,118.149)
N9: (12.092,-7.200,117.966)
O5': (15.459,-5.559,116.615)
O3': (13.558,-2.999,118.966)
OP1: (5.397,-7.087,125.258)
OP2: (4.137,-9.071,124.236)
C3': (3.780,-5.721,120.535)
C1': (5.062,-7.088,119.087)
C5': (5.579,-6.045,122.378)
O6: (8.043,-11.869,117.022)
O4': (5.964,-6.518,120.017)
C8: (5.144,-9.640,119.220)
C2: (8.333,-8.358,116.495)
C6: (7.783,-10.665,117.136)
C5: (6.767,-10.068,117.921)
C4: (6.636,-8.695,117.913)
P: (5.147,-7.996,124.117)
C4': (5.252,-5.654,120.941)
C2': (3.693,-7.040,119.762)
O2': (2.658,-7.049,118.798)
N1: (8.539,-9.719,116.438)
N2: (9.154,-7.595,115.760)
N3: (7.383,-7.786,117.228)
N7: (5.817,-10.652,118.748)
N9: (5.580,-8.418,118.756)
O5': (4.761,-7.126,122.830)
O3': (3.451,-4.600,119.715)
OP2: (4.137,-9.071,124.236)
C3': (3.780,-5.721,120.535)
C1': (5.062,-7.088,119.087)
C5': (5.579,-6.045,122.378)
O6: (8.043,-11.869,117.022)
O4': (5.964,-6.518,120.017)
C8: (5.144,-9.640,119.220)
C2: (8.333,-8.358,116.495)
C6: (7.783,-10.665,117.136)
C5: (6.767,-10.068,117.921)
C4: (6.636,-8.695,117.913)
P: (5.147,-7.996,124.117)
C4': (5.252,-5.654,120.941)
C2': (3.693,-7.040,119.762)
O2': (2.658,-7.049,118.798)
N1: (8.539,-9.719,116.438)
N2: (9.154,-7.595,115.760)
N3: (7.383,-7.786,117.228)
N7: (5.817,-10.652,118.748)
N9: (5.580,-8.418,118.756)
O5': (4.761,-7.126,122.830)
O3': (3.451,-4.600,119.715)
Image (generated by PyMOL):