ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ5:02480:01925

Extra

PDB:
ATOM 1 O3' G A2479 87.748 117.545 105.431 1.00 42.98 O
ATOM 2 P G A2480 87.339 119.091 105.412 1.00 44.84 P
ATOM 3 OP1 G A2480 86.763 119.363 106.754 1.00 47.22 O
ATOM 4 OP2 G A2480 86.551 119.402 104.198 1.00 45.54 O
ATOM 5 O5' G A2480 88.732 119.857 105.310 1.00 46.89 O
ATOM 6 C5' G A2480 89.705 119.756 106.371 1.00 42.17 C
ATOM 7 C4' G A2480 90.991 120.441 105.982 1.00 39.34 C
ATOM 8 O4' G A2480 91.641 119.744 104.886 1.00 39.48 O
ATOM 9 C3' G A2480 90.840 121.845 105.443 1.00 38.69 C
ATOM 10 O3' G A2480 90.597 122.780 106.462 1.00 39.93 O
ATOM 11 C2' G A2480 92.168 122.046 104.733 1.00 38.94 C
ATOM 12 O2' G A2480 93.251 122.255 105.616 1.00 41.44 O
ATOM 13 C1' G A2480 92.340 120.683 104.071 1.00 37.57 C
ATOM 14 N9 G A2480 91.737 120.690 102.743 1.00 37.16 N
ATOM 15 C8 G A2480 90.525 120.155 102.383 1.00 36.62 C
ATOM 16 N7 G A2480 90.238 120.340 101.126 1.00 38.14 N
ATOM 17 C5 G A2480 91.328 121.034 100.621 1.00 38.44 C
ATOM 18 C6 G A2480 91.579 121.520 99.315 1.00 40.48 C
ATOM 19 O6 G A2480 90.865 121.430 98.311 1.00 42.82 O
ATOM 20 N1 G A2480 92.804 122.173 99.238 1.00 39.82 N
ATOM 21 C2 G A2480 93.671 122.337 100.281 1.00 39.88 C
ATOM 22 N2 G A2480 94.795 122.994 100.001 1.00 41.05 N
ATOM 23 N3 G A2480 93.451 121.890 101.506 1.00 39.16 N
ATOM 24 C4 G A2480 92.265 121.254 101.604 1.00 38.02 C
ATOM 25 P U A2481 89.736 124.086 106.130 1.00 41.89 P
ATOM 26 OP1 U A2481 89.603 124.839 107.401 1.00 39.68 O
ATOM 27 OP2 U A2481 88.511 123.688 105.380 1.00 43.17 O
ATOM 28 O5' U A2481 90.652 124.889 105.109 1.00 38.26 O
TER

ATOM 1 O3' A B1924 101.359 125.188 106.862 1.00 46.00 O
ATOM 2 P G B1925 100.538 126.541 106.587 1.00 48.86 P
ATOM 3 OP1 G B1925 101.409 127.435 105.780 1.00 44.90 O
ATOM 4 OP2 G B1925 99.996 127.012 107.895 1.00 41.48 O
ATOM 5 O5' G B1925 99.336 126.066 105.655 1.00 48.48 O
ATOM 6 C5' G B1925 97.966 126.108 106.104 1.00 49.87 C
ATOM 7 C4' G B1925 97.051 125.926 104.925 1.00 50.73 C
ATOM 8 O4' G B1925 97.401 126.901 103.931 1.00 50.73 O
ATOM 9 C3' G B1925 97.240 124.600 104.184 1.00 51.86 C
ATOM 10 O3' G B1925 96.315 123.601 104.595 1.00 48.41 O
ATOM 11 C2' G B1925 97.094 124.948 102.701 1.00 53.62 C
ATOM 12 O2' G B1925 96.026 124.272 102.070 1.00 59.38 O
ATOM 13 C1' G B1925 96.857 126.460 102.724 1.00 52.71 C
ATOM 14 N9 G B1925 97.542 127.120 101.621 1.00 52.25 N
ATOM 15 C8 G B1925 98.889 127.329 101.472 1.00 52.06 C
ATOM 16 N7 G B1925 99.195 127.878 100.329 1.00 52.22 N
ATOM 17 C5 G B1925 97.974 128.048 99.692 1.00 49.36 C
ATOM 18 C6 G B1925 97.673 128.562 98.420 1.00 48.96 C
ATOM 19 O6 G B1925 98.444 128.966 97.556 1.00 51.04 O
ATOM 20 N1 G B1925 96.308 128.575 98.182 1.00 48.54 N
ATOM 21 C2 G B1925 95.352 128.139 99.053 1.00 48.34 C
ATOM 22 N2 G B1925 94.086 128.262 98.645 1.00 47.43 N
ATOM 23 N3 G B1925 95.618 127.629 100.237 1.00 49.28 N
ATOM 24 C4 G B1925 96.944 127.615 100.489 1.00 51.13 C
ATOM 25 P U B1926 96.861 122.222 105.185 1.00 47.57 P
ATOM 26 OP1 U B1926 95.698 121.323 105.360 1.00 47.52 O
ATOM 27 OP2 U B1926 97.729 122.543 106.354 1.00 48.20 O
ATOM 28 O5' U B1926 97.783 121.631 104.030 1.00 46.73 O
TER

Atoms:
OP1: (86.763,119.363,106.754)
OP2: (86.551,119.402,104.198)
C3': (90.840,121.845,105.443)
C1': (92.340,120.683,104.071)
C5': (89.705,119.756,106.371)
O6: (90.865,121.430,98.311)
O4': (91.641,119.744,104.886)
C8: (90.525,120.155,102.383)
C2: (93.671,122.337,100.281)
C6: (91.579,121.520,99.315)
C5: (91.328,121.034,100.621)
C4: (92.265,121.254,101.604)
P: (87.339,119.091,105.412)
C4': (90.991,120.441,105.982)
C2': (92.168,122.046,104.733)
O2': (93.251,122.255,105.616)
N1: (92.804,122.173,99.238)
N2: (94.795,122.994,100.001)
N3: (93.451,121.890,101.506)
N7: (90.238,120.340,101.126)
N9: (91.737,120.690,102.743)
O5': (88.732,119.857,105.310)
O3': (90.597,122.780,106.462)
OP1: (101.409,127.435,105.780)
OP2: (99.996,127.012,107.895)
C3': (97.240,124.600,104.184)
C1': (96.857,126.460,102.724)
C5': (97.966,126.108,106.104)
O6: (98.444,128.966,97.556)
O4': (97.401,126.901,103.931)
C8: (98.889,127.329,101.472)
C2: (95.352,128.139,99.053)
C6: (97.673,128.562,98.420)
C5: (97.974,128.048,99.692)
C4: (96.944,127.615,100.489)
P: (100.538,126.541,106.587)
C4': (97.051,125.926,104.925)
C2': (97.094,124.948,102.701)
O2': (96.026,124.272,102.070)
N1: (96.308,128.575,98.182)
N2: (94.086,128.262,98.645)
N3: (95.618,127.629,100.237)
N7: (99.195,127.878,100.329)
N9: (97.542,127.120,101.621)
O5': (99.336,126.066,105.655)
O3': (96.315,123.601,104.595)
Image (generated by PyMOL):
PyMOL image
show in jmol