ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQE:A344:A378

Extra

PDB:
ATOM 1 O3' A A 343 137.852 60.550 4.742 1.00 33.20 O
ATOM 2 P G A 344 136.509 59.624 4.673 1.00 34.79 P
ATOM 3 OP1 G A 344 136.796 58.416 5.474 1.00 35.48 O
ATOM 4 OP2 G A 344 136.012 59.453 3.272 1.00 33.48 O
ATOM 5 O5' G A 344 135.409 60.448 5.505 1.00 35.54 O
ATOM 6 C5' G A 344 135.718 60.987 6.814 1.00 36.74 C
ATOM 7 C4' G A 344 134.459 61.174 7.643 1.00 36.80 C
ATOM 8 O4' G A 344 133.627 59.997 7.533 1.00 37.52 O
ATOM 9 C3' G A 344 134.759 61.336 9.125 1.00 36.78 C
ATOM 10 O3' G A 344 134.899 62.695 9.465 1.00 36.81 O
ATOM 11 C2' G A 344 133.564 60.695 9.808 1.00 37.30 C
ATOM 12 O2' G A 344 132.478 61.581 9.957 1.00 38.69 O
ATOM 13 C1' G A 344 133.196 59.587 8.817 1.00 38.63 C
ATOM 14 N9 G A 344 133.818 58.288 9.083 1.00 41.11 N
ATOM 15 C8 G A 344 134.449 57.490 8.157 1.00 41.69 C
ATOM 16 N7 G A 344 134.914 56.383 8.664 1.00 42.58 N
ATOM 17 C5 G A 344 134.575 56.449 10.007 1.00 42.65 C
ATOM 18 C6 G A 344 134.818 55.532 11.051 1.00 44.25 C
ATOM 19 O6 G A 344 135.397 54.441 10.995 1.00 45.74 O
ATOM 20 N1 G A 344 134.308 55.988 12.262 1.00 44.73 N
ATOM 21 C2 G A 344 133.648 57.173 12.444 1.00 43.29 C
ATOM 22 N2 G A 344 133.247 57.437 13.694 1.00 42.73 N
ATOM 23 N3 G A 344 133.406 58.038 11.472 1.00 43.41 N
ATOM 24 C4 G A 344 133.897 57.616 10.287 1.00 42.07 C
ATOM 25 P C A 345 136.222 63.192 10.225 1.00 39.19 P
ATOM 26 OP1 C A 345 136.301 64.669 10.061 1.00 39.33 O
ATOM 27 OP2 C A 345 137.347 62.344 9.775 1.00 40.46 O
ATOM 28 O5' C A 345 135.941 62.861 11.755 1.00 40.21 O
TER

ATOM 1 O3' U B 377 125.984 58.717 15.769 1.00 42.61 O
ATOM 2 P G B 378 126.983 58.726 17.026 1.00 41.99 P
ATOM 3 OP1 G B 378 127.482 57.330 17.175 1.00 42.41 O
ATOM 4 OP2 G B 378 126.331 59.397 18.178 1.00 41.93 O
ATOM 5 O5' G B 378 128.208 59.600 16.521 1.00 42.29 O
ATOM 6 C5' G B 378 128.170 61.043 16.534 1.00 42.27 C
ATOM 7 C4' G B 378 129.513 61.579 16.116 1.00 42.73 C
ATOM 8 O4' G B 378 130.514 60.979 16.980 1.00 44.09 O
ATOM 9 C3' G B 378 129.911 61.211 14.690 1.00 43.37 C
ATOM 10 O3' G B 378 130.774 62.237 14.199 1.00 42.64 O
ATOM 11 C2' G B 378 130.711 59.925 14.873 1.00 43.61 C
ATOM 12 O2' G B 378 131.671 59.732 13.860 1.00 44.42 O
ATOM 13 C1' G B 378 131.392 60.172 16.218 1.00 44.27 C
ATOM 14 N9 G B 378 131.655 58.960 16.987 1.00 44.72 N
ATOM 15 C8 G B 378 130.848 57.852 17.106 1.00 45.07 C
ATOM 16 N7 G B 378 131.345 56.942 17.899 1.00 44.77 N
ATOM 17 C5 G B 378 132.553 57.477 18.318 1.00 44.80 C
ATOM 18 C6 G B 378 133.529 56.952 19.189 1.00 45.28 C
ATOM 19 O6 G B 378 133.524 55.874 19.785 1.00 47.06 O
ATOM 20 N1 G B 378 134.598 57.824 19.344 1.00 45.88 N
ATOM 21 C2 G B 378 134.707 59.049 18.741 1.00 46.16 C
ATOM 22 N2 G B 378 135.808 59.752 19.028 1.00 47.17 N
ATOM 23 N3 G B 378 133.801 59.551 17.921 1.00 45.50 N
ATOM 24 C4 G B 378 132.759 58.719 17.757 1.00 44.41 C
ATOM 25 P A B 379 130.545 62.857 12.740 1.00 40.94 P
ATOM 26 OP1 A B 379 130.575 61.728 11.763 1.00 39.07 O
ATOM 27 OP2 A B 379 131.523 63.950 12.614 1.00 41.45 O
ATOM 28 O5' A B 379 129.067 63.496 12.805 1.00 40.12 O
TER

Atoms:
OP1: (136.796,58.416,5.474)
OP2: (136.012,59.453,3.272)
C3': (134.759,61.336,9.125)
C1': (133.196,59.587,8.817)
C5': (135.718,60.987,6.814)
O6: (135.397,54.441,10.995)
O4': (133.627,59.997,7.533)
C8: (134.449,57.490,8.157)
C2: (133.648,57.173,12.444)
C6: (134.818,55.532,11.051)
C5: (134.575,56.449,10.007)
C4: (133.897,57.616,10.287)
P: (136.509,59.624,4.673)
C4': (134.459,61.174,7.643)
C2': (133.564,60.695,9.808)
O2': (132.478,61.581,9.957)
N1: (134.308,55.988,12.262)
N2: (133.247,57.437,13.694)
N3: (133.406,58.038,11.472)
N7: (134.914,56.383,8.664)
N9: (133.818,58.288,9.083)
O5': (135.409,60.448,5.505)
O3': (134.899,62.695,9.465)
OP1: (127.482,57.330,17.175)
OP2: (126.331,59.397,18.178)
C3': (129.911,61.211,14.690)
C1': (131.392,60.172,16.218)
C5': (128.170,61.043,16.534)
O6: (133.524,55.874,19.785)
O4': (130.514,60.979,16.980)
C8: (130.848,57.852,17.106)
C2: (134.707,59.049,18.741)
C6: (133.529,56.952,19.189)
C5: (132.553,57.477,18.318)
C4: (132.759,58.719,17.757)
P: (126.983,58.726,17.026)
C4': (129.513,61.579,16.116)
C2': (130.711,59.925,14.873)
O2': (131.671,59.732,13.860)
N1: (134.598,57.824,19.344)
N2: (135.808,59.752,19.028)
N3: (133.801,59.551,17.921)
N7: (131.345,56.942,17.899)
N9: (131.655,58.960,16.987)
O5': (128.208,59.600,16.521)
O3': (130.774,62.237,14.199)
Image (generated by PyMOL):
PyMOL image
show in jmol