Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2DU3:D55:D17
Extra
PDB:
ATOM 1 O3' C A 54 -0.512 62.855 -58.197 1.00101.61 O
ATOM 2 P G A 55 0.716 63.622 -57.493 1.00102.55 P
ATOM 3 OP1 G A 55 0.248 64.107 -56.163 1.00 99.65 O
ATOM 4 OP2 G A 55 1.260 64.596 -58.481 1.00 72.10 O
ATOM 5 O5' G A 55 1.766 62.457 -57.216 1.00 90.27 O
ATOM 6 C5' G A 55 1.484 61.461 -56.235 1.00 89.96 C
ATOM 7 C4' G A 55 2.482 60.330 -56.319 1.00101.49 C
ATOM 8 O4' G A 55 2.413 59.725 -57.633 1.00 97.65 O
ATOM 9 C3' G A 55 3.952 60.694 -56.167 1.00106.66 C
ATOM 10 O3' G A 55 4.314 60.798 -54.794 1.00112.49 O
ATOM 11 C2' G A 55 4.643 59.505 -56.825 1.00103.05 C
ATOM 12 O2' G A 55 4.742 58.384 -55.969 1.00103.50 O
ATOM 13 C1' G A 55 3.679 59.185 -57.970 1.00 97.11 C
ATOM 14 N9 G A 55 4.089 59.728 -59.261 1.00 89.78 N
ATOM 15 C8 G A 55 3.618 60.859 -59.885 1.00 88.33 C
ATOM 16 N7 G A 55 4.164 61.064 -61.054 1.00 84.44 N
ATOM 17 C5 G A 55 5.052 60.008 -61.207 1.00 86.01 C
ATOM 18 C6 G A 55 5.931 59.688 -62.279 1.00 81.66 C
ATOM 19 O6 G A 55 6.105 60.293 -63.343 1.00 85.46 O
ATOM 20 N1 G A 55 6.655 58.531 -62.016 1.00 87.64 N
ATOM 21 C2 G A 55 6.560 57.782 -60.868 1.00 89.97 C
ATOM 22 N2 G A 55 7.359 56.710 -60.796 1.00 84.85 N
ATOM 23 N3 G A 55 5.746 58.065 -59.863 1.00 85.65 N
ATOM 24 C4 G A 55 5.025 59.182 -60.102 1.00 88.38 C
ATOM 25 P A A 56 5.381 61.906 -54.333 1.00107.81 P
ATOM 26 OP1 A A 56 5.357 61.940 -52.848 1.00115.32 O
ATOM 27 OP2 A A 56 5.134 63.157 -55.099 1.00114.25 O
ATOM 28 O5' A A 56 6.784 61.310 -54.795 1.00111.52 O
TER
ATOM 1 O3' G B 16 11.416 55.032 -61.741 1.00127.69 O
ATOM 2 P G B 17 11.646 54.338 -60.296 1.00120.09 P
ATOM 3 OP1 G B 17 12.544 55.200 -59.485 1.00126.24 O
ATOM 4 OP2 G B 17 12.025 52.924 -60.545 1.00123.03 O
ATOM 5 O5' G B 17 10.216 54.327 -59.598 1.00115.16 O
ATOM 6 C5' G B 17 10.088 54.518 -58.187 1.00112.48 C
ATOM 7 C4' G B 17 8.726 54.066 -57.727 1.00109.71 C
ATOM 8 O4' G B 17 7.730 54.707 -58.542 1.00112.64 O
ATOM 9 C3' G B 17 8.481 52.570 -57.828 1.00111.44 C
ATOM 10 O3' G B 17 8.933 52.077 -56.552 1.00105.92 O
ATOM 11 C2' G B 17 6.987 52.452 -58.165 1.00112.46 C
ATOM 12 O2' G B 17 6.164 52.375 -57.022 1.00138.28 O
ATOM 13 C1' G B 17 6.685 53.806 -58.819 1.00114.11 C
ATOM 14 N9 G B 17 6.311 53.989 -60.221 1.00105.34 N
ATOM 15 C8 G B 17 6.998 53.641 -61.362 1.00 97.64 C
ATOM 16 N7 G B 17 6.487 54.176 -62.446 1.00 90.68 N
ATOM 17 C5 G B 17 5.373 54.877 -61.994 1.00 96.66 C
ATOM 18 C6 G B 17 4.439 55.727 -62.689 1.00 89.05 C
ATOM 19 O6 G B 17 4.440 56.089 -63.876 1.00 85.87 O
ATOM 20 N1 G B 17 3.448 56.199 -61.834 1.00 81.52 N
ATOM 21 C2 G B 17 3.370 55.932 -60.489 1.00 90.55 C
ATOM 22 N2 G B 17 2.330 56.459 -59.834 1.00 95.85 N
ATOM 23 N3 G B 17 4.246 55.197 -59.829 1.00105.09 N
ATOM 24 C4 G B 17 5.213 54.706 -60.636 1.00106.32 C
ATOM 25 P C B 18 8.183 50.869 -55.796 1.00100.32 P
ATOM 26 OP1 C B 18 6.937 51.387 -55.183 1.00106.84 O
ATOM 27 OP2 C B 18 9.206 50.245 -54.922 1.00121.45 O
ATOM 28 O5' C B 18 7.837 49.823 -56.948 1.00119.13 O
TER
ATOM 2 P G A 55 0.716 63.622 -57.493 1.00102.55 P
ATOM 3 OP1 G A 55 0.248 64.107 -56.163 1.00 99.65 O
ATOM 4 OP2 G A 55 1.260 64.596 -58.481 1.00 72.10 O
ATOM 5 O5' G A 55 1.766 62.457 -57.216 1.00 90.27 O
ATOM 6 C5' G A 55 1.484 61.461 -56.235 1.00 89.96 C
ATOM 7 C4' G A 55 2.482 60.330 -56.319 1.00101.49 C
ATOM 8 O4' G A 55 2.413 59.725 -57.633 1.00 97.65 O
ATOM 9 C3' G A 55 3.952 60.694 -56.167 1.00106.66 C
ATOM 10 O3' G A 55 4.314 60.798 -54.794 1.00112.49 O
ATOM 11 C2' G A 55 4.643 59.505 -56.825 1.00103.05 C
ATOM 12 O2' G A 55 4.742 58.384 -55.969 1.00103.50 O
ATOM 13 C1' G A 55 3.679 59.185 -57.970 1.00 97.11 C
ATOM 14 N9 G A 55 4.089 59.728 -59.261 1.00 89.78 N
ATOM 15 C8 G A 55 3.618 60.859 -59.885 1.00 88.33 C
ATOM 16 N7 G A 55 4.164 61.064 -61.054 1.00 84.44 N
ATOM 17 C5 G A 55 5.052 60.008 -61.207 1.00 86.01 C
ATOM 18 C6 G A 55 5.931 59.688 -62.279 1.00 81.66 C
ATOM 19 O6 G A 55 6.105 60.293 -63.343 1.00 85.46 O
ATOM 20 N1 G A 55 6.655 58.531 -62.016 1.00 87.64 N
ATOM 21 C2 G A 55 6.560 57.782 -60.868 1.00 89.97 C
ATOM 22 N2 G A 55 7.359 56.710 -60.796 1.00 84.85 N
ATOM 23 N3 G A 55 5.746 58.065 -59.863 1.00 85.65 N
ATOM 24 C4 G A 55 5.025 59.182 -60.102 1.00 88.38 C
ATOM 25 P A A 56 5.381 61.906 -54.333 1.00107.81 P
ATOM 26 OP1 A A 56 5.357 61.940 -52.848 1.00115.32 O
ATOM 27 OP2 A A 56 5.134 63.157 -55.099 1.00114.25 O
ATOM 28 O5' A A 56 6.784 61.310 -54.795 1.00111.52 O
TER
ATOM 1 O3' G B 16 11.416 55.032 -61.741 1.00127.69 O
ATOM 2 P G B 17 11.646 54.338 -60.296 1.00120.09 P
ATOM 3 OP1 G B 17 12.544 55.200 -59.485 1.00126.24 O
ATOM 4 OP2 G B 17 12.025 52.924 -60.545 1.00123.03 O
ATOM 5 O5' G B 17 10.216 54.327 -59.598 1.00115.16 O
ATOM 6 C5' G B 17 10.088 54.518 -58.187 1.00112.48 C
ATOM 7 C4' G B 17 8.726 54.066 -57.727 1.00109.71 C
ATOM 8 O4' G B 17 7.730 54.707 -58.542 1.00112.64 O
ATOM 9 C3' G B 17 8.481 52.570 -57.828 1.00111.44 C
ATOM 10 O3' G B 17 8.933 52.077 -56.552 1.00105.92 O
ATOM 11 C2' G B 17 6.987 52.452 -58.165 1.00112.46 C
ATOM 12 O2' G B 17 6.164 52.375 -57.022 1.00138.28 O
ATOM 13 C1' G B 17 6.685 53.806 -58.819 1.00114.11 C
ATOM 14 N9 G B 17 6.311 53.989 -60.221 1.00105.34 N
ATOM 15 C8 G B 17 6.998 53.641 -61.362 1.00 97.64 C
ATOM 16 N7 G B 17 6.487 54.176 -62.446 1.00 90.68 N
ATOM 17 C5 G B 17 5.373 54.877 -61.994 1.00 96.66 C
ATOM 18 C6 G B 17 4.439 55.727 -62.689 1.00 89.05 C
ATOM 19 O6 G B 17 4.440 56.089 -63.876 1.00 85.87 O
ATOM 20 N1 G B 17 3.448 56.199 -61.834 1.00 81.52 N
ATOM 21 C2 G B 17 3.370 55.932 -60.489 1.00 90.55 C
ATOM 22 N2 G B 17 2.330 56.459 -59.834 1.00 95.85 N
ATOM 23 N3 G B 17 4.246 55.197 -59.829 1.00105.09 N
ATOM 24 C4 G B 17 5.213 54.706 -60.636 1.00106.32 C
ATOM 25 P C B 18 8.183 50.869 -55.796 1.00100.32 P
ATOM 26 OP1 C B 18 6.937 51.387 -55.183 1.00106.84 O
ATOM 27 OP2 C B 18 9.206 50.245 -54.922 1.00121.45 O
ATOM 28 O5' C B 18 7.837 49.823 -56.948 1.00119.13 O
TER
Atoms:
OP1: (0.248,64.107,-56.163)
OP2: (1.260,64.596,-58.481)
C3': (3.952,60.694,-56.167)
C1': (3.679,59.185,-57.970)
C5': (1.484,61.461,-56.235)
O6: (6.105,60.293,-63.343)
O4': (2.413,59.725,-57.633)
C8: (3.618,60.859,-59.885)
C2: (6.560,57.782,-60.868)
C6: (5.931,59.688,-62.279)
C5: (5.052,60.008,-61.207)
C4: (5.025,59.182,-60.102)
P: (0.716,63.622,-57.493)
C4': (2.482,60.330,-56.319)
C2': (4.643,59.505,-56.825)
O2': (4.742,58.384,-55.969)
N1: (6.655,58.531,-62.016)
N2: (7.359,56.710,-60.796)
N3: (5.746,58.065,-59.863)
N7: (4.164,61.064,-61.054)
N9: (4.089,59.728,-59.261)
O5': (1.766,62.457,-57.216)
O3': (4.314,60.798,-54.794)
OP2: (1.260,64.596,-58.481)
C3': (3.952,60.694,-56.167)
C1': (3.679,59.185,-57.970)
C5': (1.484,61.461,-56.235)
O6: (6.105,60.293,-63.343)
O4': (2.413,59.725,-57.633)
C8: (3.618,60.859,-59.885)
C2: (6.560,57.782,-60.868)
C6: (5.931,59.688,-62.279)
C5: (5.052,60.008,-61.207)
C4: (5.025,59.182,-60.102)
P: (0.716,63.622,-57.493)
C4': (2.482,60.330,-56.319)
C2': (4.643,59.505,-56.825)
O2': (4.742,58.384,-55.969)
N1: (6.655,58.531,-62.016)
N2: (7.359,56.710,-60.796)
N3: (5.746,58.065,-59.863)
N7: (4.164,61.064,-61.054)
N9: (4.089,59.728,-59.261)
O5': (1.766,62.457,-57.216)
O3': (4.314,60.798,-54.794)
OP1: (12.544,55.200,-59.485)
OP2: (12.025,52.924,-60.545)
C3': (8.481,52.570,-57.828)
C1': (6.685,53.806,-58.819)
C5': (10.088,54.518,-58.187)
O6: (4.440,56.089,-63.876)
O4': (7.730,54.707,-58.542)
C8: (6.998,53.641,-61.362)
C2: (3.370,55.932,-60.489)
C6: (4.439,55.727,-62.689)
C5: (5.373,54.877,-61.994)
C4: (5.213,54.706,-60.636)
P: (11.646,54.338,-60.296)
C4': (8.726,54.066,-57.727)
C2': (6.987,52.452,-58.165)
O2': (6.164,52.375,-57.022)
N1: (3.448,56.199,-61.834)
N2: (2.330,56.459,-59.834)
N3: (4.246,55.197,-59.829)
N7: (6.487,54.176,-62.446)
N9: (6.311,53.989,-60.221)
O5': (10.216,54.327,-59.598)
O3': (8.933,52.077,-56.552)
OP2: (12.025,52.924,-60.545)
C3': (8.481,52.570,-57.828)
C1': (6.685,53.806,-58.819)
C5': (10.088,54.518,-58.187)
O6: (4.440,56.089,-63.876)
O4': (7.730,54.707,-58.542)
C8: (6.998,53.641,-61.362)
C2: (3.370,55.932,-60.489)
C6: (4.439,55.727,-62.689)
C5: (5.373,54.877,-61.994)
C4: (5.213,54.706,-60.636)
P: (11.646,54.338,-60.296)
C4': (8.726,54.066,-57.727)
C2': (6.987,52.452,-58.165)
O2': (6.164,52.375,-57.022)
N1: (3.448,56.199,-61.834)
N2: (2.330,56.459,-59.834)
N3: (4.246,55.197,-59.829)
N7: (6.487,54.176,-62.446)
N9: (6.311,53.989,-60.221)
O5': (10.216,54.327,-59.598)
O3': (8.933,52.077,-56.552)
Image (generated by PyMOL):