ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3RW6:H50:H13

Extra

PDB:
ATOM 1 O3' G A 49 -3.055 -11.735 -5.761 1.00 28.87 O
ATOM 2 P G A 50 -3.598 -11.168 -7.157 1.00 30.44 P
ATOM 3 OP1 G A 50 -4.384 -12.227 -7.819 1.00 29.29 O
ATOM 4 OP2 G A 50 -2.462 -10.521 -7.857 1.00 27.21 O
ATOM 5 O5' G A 50 -4.605 -10.019 -6.713 1.00 25.84 O
ATOM 6 C5' G A 50 -5.738 -10.305 -5.952 1.00 28.41 C
ATOM 7 C4' G A 50 -6.396 -8.982 -5.616 1.00 31.28 C
ATOM 8 O4' G A 50 -5.490 -8.134 -4.845 1.00 31.13 O
ATOM 9 C3' G A 50 -6.747 -8.116 -6.818 1.00 30.69 C
ATOM 10 O3' G A 50 -7.957 -8.575 -7.436 1.00 30.82 O
ATOM 11 C2' G A 50 -6.964 -6.805 -6.085 1.00 27.52 C
ATOM 12 O2' G A 50 -8.170 -6.836 -5.353 1.00 27.33 O
ATOM 13 C1' G A 50 -5.766 -6.787 -5.140 1.00 25.52 C
ATOM 14 N9 G A 50 -4.576 -6.244 -5.782 1.00 31.22 N
ATOM 15 C8 G A 50 -3.446 -6.938 -6.135 1.00 28.41 C
ATOM 16 N7 G A 50 -2.535 -6.196 -6.698 1.00 29.74 N
ATOM 17 C5 G A 50 -3.094 -4.921 -6.720 1.00 31.00 C
ATOM 18 C6 G A 50 -2.570 -3.708 -7.225 1.00 28.52 C
ATOM 19 O6 G A 50 -1.469 -3.506 -7.755 1.00 25.65 O
ATOM 20 N1 G A 50 -3.470 -2.662 -7.056 1.00 30.10 N
ATOM 21 C2 G A 50 -4.715 -2.757 -6.475 1.00 30.86 C
ATOM 22 N2 G A 50 -5.433 -1.621 -6.390 1.00 30.27 N
ATOM 23 N3 G A 50 -5.215 -3.889 -6.002 1.00 29.07 N
ATOM 24 C4 G A 50 -4.351 -4.928 -6.157 1.00 30.17 C
ATOM 25 P G A 51 -8.294 -8.254 -8.969 1.00 32.55 P
ATOM 26 OP1 G A 51 -9.628 -8.821 -9.248 1.00 30.70 O
ATOM 27 OP2 G A 51 -7.096 -8.631 -9.743 1.00 31.08 O
ATOM 28 O5' G A 51 -8.418 -6.651 -9.057 1.00 31.93 O
TER

ATOM 1 O3' A B 12 -10.775 0.744 1.447 1.00 30.49 O
ATOM 2 P G B 13 -10.893 -0.488 0.471 1.00 28.59 P
ATOM 3 OP1 G B 13 -12.131 -0.285 -0.297 1.00 31.37 O
ATOM 4 OP2 G B 13 -10.722 -1.753 1.241 1.00 31.72 O
ATOM 5 O5' G B 13 -9.609 -0.298 -0.475 1.00 29.46 O
ATOM 6 C5' G B 13 -9.648 0.559 -1.621 1.00 31.00 C
ATOM 7 C4' G B 13 -10.132 -0.206 -2.849 1.00 34.22 C
ATOM 8 O4' G B 13 -10.264 0.673 -4.010 1.00 33.70 O
ATOM 9 C3' G B 13 -9.262 -1.373 -3.322 1.00 30.49 C
ATOM 10 O3' G B 13 -10.188 -2.394 -3.619 1.00 33.84 O
ATOM 11 C2' G B 13 -8.560 -0.793 -4.567 1.00 33.05 C
ATOM 12 O2' G B 13 -8.158 -1.718 -5.563 1.00 32.86 O
ATOM 13 C1' G B 13 -9.663 0.074 -5.146 1.00 32.32 C
ATOM 14 N9 G B 13 -9.170 1.149 -6.002 1.00 32.07 N
ATOM 15 C8 G B 13 -8.007 1.850 -5.829 1.00 33.29 C
ATOM 16 N7 G B 13 -7.821 2.769 -6.728 1.00 35.28 N
ATOM 17 C5 G B 13 -8.935 2.672 -7.553 1.00 35.68 C
ATOM 18 C6 G B 13 -9.289 3.426 -8.707 1.00 33.92 C
ATOM 19 O6 G B 13 -8.668 4.349 -9.244 1.00 32.35 O
ATOM 20 N1 G B 13 -10.499 3.008 -9.244 1.00 33.82 N
ATOM 21 C2 G B 13 -11.272 1.989 -8.731 1.00 33.86 C
ATOM 22 N2 G B 13 -12.419 1.731 -9.383 1.00 36.50 N
ATOM 23 N3 G B 13 -10.949 1.281 -7.652 1.00 34.64 N
ATOM 24 C4 G B 13 -9.774 1.678 -7.115 1.00 29.65 C
ATOM 25 P A B 14 -9.834 -3.958 -3.606 1.00 30.03 P
ATOM 26 OP1 A B 14 -8.625 -4.138 -4.434 1.00 29.34 O
ATOM 27 OP2 A B 14 -11.132 -4.593 -3.921 1.00 29.29 O
ATOM 28 O5' A B 14 -9.407 -4.338 -2.107 1.00 32.59 O
TER

Atoms:
OP1: (-4.384,-12.227,-7.819)
OP2: (-2.462,-10.521,-7.857)
C3': (-6.747,-8.116,-6.818)
C1': (-5.766,-6.787,-5.140)
C5': (-5.738,-10.305,-5.952)
O6: (-1.469,-3.506,-7.755)
O4': (-5.490,-8.134,-4.845)
C8: (-3.446,-6.938,-6.135)
C2: (-4.715,-2.757,-6.475)
C6: (-2.570,-3.708,-7.225)
C5: (-3.094,-4.921,-6.720)
C4: (-4.351,-4.928,-6.157)
P: (-3.598,-11.168,-7.157)
C4': (-6.396,-8.982,-5.616)
C2': (-6.964,-6.805,-6.085)
O2': (-8.170,-6.836,-5.353)
N1: (-3.470,-2.662,-7.056)
N2: (-5.433,-1.621,-6.390)
N3: (-5.215,-3.889,-6.002)
N7: (-2.535,-6.196,-6.698)
N9: (-4.576,-6.244,-5.782)
O5': (-4.605,-10.019,-6.713)
O3': (-7.957,-8.575,-7.436)
OP1: (-12.131,-0.285,-0.297)
OP2: (-10.722,-1.753,1.241)
C3': (-9.262,-1.373,-3.322)
C1': (-9.663,0.074,-5.146)
C5': (-9.648,0.559,-1.621)
O6: (-8.668,4.349,-9.244)
O4': (-10.264,0.673,-4.010)
C8: (-8.007,1.850,-5.829)
C2: (-11.272,1.989,-8.731)
C6: (-9.289,3.426,-8.707)
C5: (-8.935,2.672,-7.553)
C4: (-9.774,1.678,-7.115)
P: (-10.893,-0.488,0.471)
C4': (-10.132,-0.206,-2.849)
C2': (-8.560,-0.793,-4.567)
O2': (-8.158,-1.718,-5.563)
N1: (-10.499,3.008,-9.244)
N2: (-12.419,1.731,-9.383)
N3: (-10.949,1.281,-7.652)
N7: (-7.821,2.769,-6.728)
N9: (-9.170,1.149,-6.002)
O5': (-9.609,-0.298,-0.475)
O3': (-10.188,-2.394,-3.619)
Image (generated by PyMOL):
PyMOL image
show in jmol