ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OWW:A9:A31

Extra

PDB:
ATOM 1 O3' A A 8 5.357 -35.420 20.110 1.00 53.74 O
ATOM 2 P G A 9 6.541 -36.309 20.715 1.00 54.24 P
ATOM 3 OP1 G A 9 6.830 -35.779 22.068 1.00 54.23 O
ATOM 4 OP2 G A 9 7.624 -36.415 19.710 1.00 53.93 O
ATOM 5 O5' G A 9 5.853 -37.749 20.866 1.00 54.63 O
ATOM 6 C5' G A 9 4.747 -37.975 21.742 1.00 54.41 C
ATOM 7 C4' G A 9 4.115 -39.325 21.453 1.00 54.94 C
ATOM 8 O4' G A 9 3.613 -39.363 20.095 1.00 55.14 O
ATOM 9 C3' G A 9 5.067 -40.508 21.540 1.00 55.34 C
ATOM 10 O3' G A 9 5.102 -40.974 22.871 1.00 55.53 O
ATOM 11 C2' G A 9 4.447 -41.529 20.593 1.00 55.64 C
ATOM 12 O2' G A 9 3.438 -42.306 21.207 1.00 55.95 O
ATOM 13 C1' G A 9 3.829 -40.641 19.519 1.00 55.59 C
ATOM 14 N9 G A 9 4.667 -40.495 18.326 1.00 56.12 N
ATOM 15 C8 G A 9 5.666 -39.571 18.134 1.00 56.14 C
ATOM 16 N7 G A 9 6.250 -39.664 16.975 1.00 56.33 N
ATOM 17 C5 G A 9 5.599 -40.716 16.350 1.00 56.53 C
ATOM 18 C6 G A 9 5.808 -41.277 15.067 1.00 57.01 C
ATOM 19 O6 G A 9 6.635 -40.932 14.216 1.00 57.67 O
ATOM 20 N1 G A 9 4.944 -42.338 14.806 1.00 57.45 N
ATOM 21 C2 G A 9 3.990 -42.796 15.687 1.00 57.49 C
ATOM 22 N2 G A 9 3.242 -43.828 15.270 1.00 58.08 N
ATOM 23 N3 G A 9 3.784 -42.278 16.895 1.00 57.04 N
ATOM 24 C4 G A 9 4.622 -41.243 17.166 1.00 56.52 C
ATOM 25 P A A 10 6.398 -40.740 23.774 1.00 56.02 P
ATOM 26 OP1 A A 10 5.920 -40.418 25.142 1.00 56.74 O
ATOM 27 OP2 A A 10 7.325 -39.818 23.081 1.00 55.50 O
ATOM 28 O5' A A 10 7.067 -42.188 23.787 1.00 55.80 O
TER

ATOM 1 O3' C B 30 1.087 -44.474 21.030 1.00 52.25 O
ATOM 2 P G B 31 -0.460 -44.455 20.632 1.00 52.80 P
ATOM 3 OP1 G B 31 -1.113 -43.316 21.320 1.00 52.15 O
ATOM 4 OP2 G B 31 -1.009 -45.824 20.782 1.00 53.73 O
ATOM 5 O5' G B 31 -0.402 -44.135 19.074 1.00 52.30 O
ATOM 6 C5' G B 31 0.077 -42.883 18.592 1.00 51.29 C
ATOM 7 C4' G B 31 -0.002 -42.896 17.082 1.00 51.20 C
ATOM 8 O4' G B 31 0.664 -44.085 16.566 1.00 51.70 O
ATOM 9 C3' G B 31 -1.438 -42.966 16.577 1.00 51.21 C
ATOM 10 O3' G B 31 -1.650 -42.053 15.515 1.00 51.21 O
ATOM 11 C2' G B 31 -1.555 -44.424 16.138 1.00 52.17 C
ATOM 12 O2' G B 31 -2.587 -44.654 15.200 1.00 53.21 O
ATOM 13 C1' G B 31 -0.163 -44.631 15.559 1.00 52.10 C
ATOM 14 N9 G B 31 0.164 -46.028 15.274 1.00 52.32 N
ATOM 15 C8 G B 31 0.474 -46.530 14.034 1.00 52.73 C
ATOM 16 N7 G B 31 0.717 -47.808 14.031 1.00 53.30 N
ATOM 17 C5 G B 31 0.560 -48.185 15.354 1.00 52.76 C
ATOM 18 C6 G B 31 0.697 -49.460 15.950 1.00 53.14 C
ATOM 19 O6 G B 31 0.994 -50.523 15.396 1.00 53.73 O
ATOM 20 N1 G B 31 0.456 -49.430 17.324 1.00 52.84 N
ATOM 21 C2 G B 31 0.120 -48.295 18.028 1.00 51.68 C
ATOM 22 N2 G B 31 -0.077 -48.450 19.341 1.00 51.80 N
ATOM 23 N3 G B 31 -0.014 -47.090 17.481 1.00 51.15 N
ATOM 24 C4 G B 31 0.218 -47.104 16.140 1.00 52.14 C
ATOM 25 P A B 32 -3.081 -41.358 15.393 1.00 51.20 P
ATOM 26 OP1 A B 32 -3.120 -40.240 16.361 1.00 51.04 O
ATOM 27 OP2 A B 32 -4.107 -42.426 15.463 1.00 51.46 O
ATOM 28 O5' A B 32 -3.057 -40.719 13.924 1.00 52.58 O
TER

Atoms:
OP1: (6.830,-35.779,22.068)
OP2: (7.624,-36.415,19.710)
C3': (5.067,-40.508,21.540)
C1': (3.829,-40.641,19.519)
C5': (4.747,-37.975,21.742)
O6: (6.635,-40.932,14.216)
O4': (3.613,-39.363,20.095)
C8: (5.666,-39.571,18.134)
C2: (3.990,-42.796,15.687)
C6: (5.808,-41.277,15.067)
C5: (5.599,-40.716,16.350)
C4: (4.622,-41.243,17.166)
P: (6.541,-36.309,20.715)
C4': (4.115,-39.325,21.453)
C2': (4.447,-41.529,20.593)
O2': (3.438,-42.306,21.207)
N1: (4.944,-42.338,14.806)
N2: (3.242,-43.828,15.270)
N3: (3.784,-42.278,16.895)
N7: (6.250,-39.664,16.975)
N9: (4.667,-40.495,18.326)
O5': (5.853,-37.749,20.866)
O3': (5.102,-40.974,22.871)
OP1: (-1.113,-43.316,21.320)
OP2: (-1.009,-45.824,20.782)
C3': (-1.438,-42.966,16.577)
C1': (-0.163,-44.631,15.559)
C5': (0.077,-42.883,18.592)
O6: (0.994,-50.523,15.396)
O4': (0.664,-44.085,16.566)
C8: (0.474,-46.530,14.034)
C2: (0.120,-48.295,18.028)
C6: (0.697,-49.460,15.950)
C5: (0.560,-48.185,15.354)
C4: (0.218,-47.104,16.140)
P: (-0.460,-44.455,20.632)
C4': (-0.002,-42.896,17.082)
C2': (-1.555,-44.424,16.138)
O2': (-2.587,-44.654,15.200)
N1: (0.456,-49.430,17.324)
N2: (-0.077,-48.450,19.341)
N3: (-0.014,-47.090,17.481)
N7: (0.717,-47.808,14.031)
N9: (0.164,-46.028,15.274)
O5': (-0.402,-44.135,19.074)
O3': (-1.650,-42.053,15.515)
Image (generated by PyMOL):
PyMOL image
show in jmol