ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1N77:C55:C17

Extra

PDB:
ATOM 1 O3' C A 54 -11.112 77.960 46.534 1.00 79.69 O
ATOM 2 P G A 55 -9.907 78.353 47.515 1.00 81.15 P
ATOM 3 OP1 G A 55 -10.420 78.458 48.909 1.00 80.57 O
ATOM 4 OP2 G A 55 -9.224 79.516 46.892 1.00 80.69 O
ATOM 5 O5' G A 55 -8.924 77.099 47.431 1.00 82.66 O
ATOM 6 C5' G A 55 -9.245 75.867 48.077 1.00 82.44 C
ATOM 7 C4' G A 55 -8.232 74.802 47.716 1.00 82.32 C
ATOM 8 O4' G A 55 -8.285 74.535 46.292 1.00 82.49 O
ATOM 9 C3' G A 55 -6.779 75.160 47.968 1.00 81.99 C
ATOM 10 O3' G A 55 -6.464 74.883 49.314 1.00 81.95 O
ATOM 11 C2' G A 55 -6.054 74.205 47.029 1.00 82.15 C
ATOM 12 O2' G A 55 -5.952 72.893 47.540 1.00 82.38 O
ATOM 13 C1' G A 55 -6.991 74.206 45.822 1.00 82.22 C
ATOM 14 N9 G A 55 -6.596 75.204 44.839 1.00 82.88 N
ATOM 15 C8 G A 55 -7.098 76.473 44.687 1.00 83.06 C
ATOM 16 N7 G A 55 -6.517 77.142 43.728 1.00 83.19 N
ATOM 17 C5 G A 55 -5.581 76.256 43.211 1.00 82.94 C
ATOM 18 C6 G A 55 -4.646 76.413 42.152 1.00 82.55 C
ATOM 19 O6 G A 55 -4.444 77.403 41.438 1.00 81.85 O
ATOM 20 N1 G A 55 -3.896 75.258 41.959 1.00 82.72 N
ATOM 21 C2 G A 55 -4.021 74.103 42.692 1.00 82.69 C
ATOM 22 N2 G A 55 -3.217 73.095 42.352 1.00 82.20 N
ATOM 23 N3 G A 55 -4.878 73.948 43.684 1.00 83.08 N
ATOM 24 C4 G A 55 -5.622 75.055 43.885 1.00 83.28 C
ATOM 25 P A A 56 -5.751 75.996 50.213 1.00 82.28 P
ATOM 26 OP1 A A 56 -6.799 76.747 50.955 1.00 83.71 O
ATOM 27 OP2 A A 56 -4.811 76.736 49.329 1.00 82.02 O
ATOM 28 O5' A A 56 -5.000 75.069 51.261 1.00 80.96 O
TER

ATOM 1 O3' G B 16 1.089 71.757 41.174 1.00 82.82 O
ATOM 2 P G B 17 0.683 70.552 42.177 1.00 83.48 P
ATOM 3 OP1 G B 17 1.525 70.659 43.395 1.00 83.73 O
ATOM 4 OP2 G B 17 0.714 69.299 41.376 1.00 84.43 O
ATOM 5 O5' G B 17 -0.836 70.786 42.609 1.00 83.55 O
ATOM 6 C5' G B 17 -1.196 70.778 43.992 1.00 83.11 C
ATOM 7 C4' G B 17 -2.266 69.738 44.288 1.00 82.10 C
ATOM 8 O4' G B 17 -3.536 70.152 43.718 1.00 82.95 O
ATOM 9 C3' G B 17 -2.005 68.357 43.708 1.00 80.58 C
ATOM 10 O3' G B 17 -1.720 67.277 44.607 1.00 77.10 O
ATOM 11 C2' G B 17 -2.814 68.249 42.416 1.00 80.98 C
ATOM 12 O2' G B 17 -3.477 67.011 42.258 1.00 79.57 O
ATOM 13 C1' G B 17 -3.884 69.326 42.620 1.00 82.86 C
ATOM 14 N9 G B 17 -4.161 70.184 41.473 1.00 84.62 N
ATOM 15 C8 G B 17 -3.524 70.205 40.255 1.00 85.03 C
ATOM 16 N7 G B 17 -4.007 71.106 39.440 1.00 85.56 N
ATOM 17 C5 G B 17 -5.025 71.712 40.165 1.00 86.61 C
ATOM 18 C6 G B 17 -5.909 72.769 39.812 1.00 87.18 C
ATOM 19 O6 G B 17 -5.962 73.410 38.755 1.00 88.05 O
ATOM 20 N1 G B 17 -6.792 73.062 40.848 1.00 87.36 N
ATOM 21 C2 G B 17 -6.821 72.427 42.068 1.00 87.31 C
ATOM 22 N2 G B 17 -7.749 72.851 42.938 1.00 87.65 N
ATOM 23 N3 G B 17 -5.999 71.450 42.410 1.00 86.62 N
ATOM 24 C4 G B 17 -5.136 71.147 41.418 1.00 86.14 C
ATOM 25 P U B 18 -2.920 66.426 45.266 1.00 73.00 P
ATOM 26 OP1 U B 18 -4.175 66.643 44.507 1.00 74.36 O
ATOM 27 OP2 U B 18 -2.893 66.697 46.728 1.00 72.65 O
ATOM 28 O5' U B 18 -2.470 64.912 45.078 1.00 70.77 O
TER

Atoms:
OP1: (-10.420,78.458,48.909)
OP2: (-9.224,79.516,46.892)
C3': (-6.779,75.160,47.968)
C1': (-6.991,74.206,45.822)
C5': (-9.245,75.867,48.077)
O6: (-4.444,77.403,41.438)
O4': (-8.285,74.535,46.292)
C8: (-7.098,76.473,44.687)
C2: (-4.021,74.103,42.692)
C6: (-4.646,76.413,42.152)
C5: (-5.581,76.256,43.211)
C4: (-5.622,75.055,43.885)
P: (-9.907,78.353,47.515)
C4': (-8.232,74.802,47.716)
C2': (-6.054,74.205,47.029)
O2': (-5.952,72.893,47.540)
N1: (-3.896,75.258,41.959)
N2: (-3.217,73.095,42.352)
N3: (-4.878,73.948,43.684)
N7: (-6.517,77.142,43.728)
N9: (-6.596,75.204,44.839)
O5': (-8.924,77.099,47.431)
O3': (-6.464,74.883,49.314)
OP1: (1.525,70.659,43.395)
OP2: (0.714,69.299,41.376)
C3': (-2.005,68.357,43.708)
C1': (-3.884,69.326,42.620)
C5': (-1.196,70.778,43.992)
O6: (-5.962,73.410,38.755)
O4': (-3.536,70.152,43.718)
C8: (-3.524,70.205,40.255)
C2: (-6.821,72.427,42.068)
C6: (-5.909,72.769,39.812)
C5: (-5.025,71.712,40.165)
C4: (-5.136,71.147,41.418)
P: (0.683,70.552,42.177)
C4': (-2.266,69.738,44.288)
C2': (-2.814,68.249,42.416)
O2': (-3.477,67.011,42.258)
N1: (-6.792,73.062,40.848)
N2: (-7.749,72.851,42.938)
N3: (-5.999,71.450,42.410)
N7: (-4.007,71.106,39.440)
N9: (-4.161,70.184,41.473)
O5': (-0.836,70.786,42.609)
O3': (-1.720,67.277,44.607)
Image (generated by PyMOL):
PyMOL image
show in jmol