Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5H:824:5342
Extra
PDB:
ATOM 1 O3' G A 23 113.644 -4.447 187.714 1.00 47.28 O
ATOM 2 P G A 24 113.954 -6.001 187.552 1.00 47.40 P
ATOM 3 OP1 G A 24 115.165 -6.094 186.684 1.00 47.38 O
ATOM 4 OP2 G A 24 112.697 -6.643 187.101 1.00 48.05 O
ATOM 5 O5' G A 24 114.266 -6.499 189.050 1.00 46.75 O
ATOM 6 C5' G A 24 115.443 -6.123 189.739 1.00 46.07 C
ATOM 7 C4' G A 24 115.284 -6.284 191.225 1.00 45.57 C
ATOM 8 O4' G A 24 113.940 -5.899 191.624 1.00 45.81 O
ATOM 9 C3' G A 24 115.441 -7.697 191.763 1.00 45.47 C
ATOM 10 O3' G A 24 116.792 -8.085 191.942 1.00 45.04 O
ATOM 11 C2' G A 24 114.667 -7.654 193.060 1.00 45.24 C
ATOM 12 O2' G A 24 115.468 -7.095 194.081 1.00 44.55 O
ATOM 13 C1' G A 24 113.516 -6.688 192.718 1.00 45.63 C
ATOM 14 N9 G A 24 112.317 -7.448 192.325 1.00 46.26 N
ATOM 15 C8 G A 24 111.769 -7.585 191.071 1.00 46.93 C
ATOM 16 N7 G A 24 110.772 -8.431 191.062 1.00 47.38 N
ATOM 17 C5 G A 24 110.659 -8.907 192.357 1.00 47.00 C
ATOM 18 C6 G A 24 109.793 -9.847 192.953 1.00 47.22 C
ATOM 19 O6 G A 24 108.862 -10.491 192.524 1.00 47.80 O
ATOM 20 N1 G A 24 110.034 -10.042 194.275 1.00 46.70 N
ATOM 21 C2 G A 24 110.993 -9.431 194.965 1.00 46.03 C
ATOM 22 N2 G A 24 111.000 -9.791 196.231 1.00 45.65 N
ATOM 23 N3 G A 24 111.831 -8.557 194.458 1.00 45.80 N
ATOM 24 C4 G A 24 111.614 -8.322 193.147 1.00 46.31 C
ATOM 25 P U A 25 117.278 -9.508 191.366 1.00 44.80 P
ATOM 26 OP1 U A 25 118.777 -9.492 191.361 1.00 44.36 O
ATOM 27 OP2 U A 25 116.558 -9.726 190.076 1.00 45.54 O
ATOM 28 O5' U A 25 116.731 -10.563 192.434 1.00 44.71 O
TER
ATOM 1 O3' A B 341 114.723 -5.697 203.214 1.00 39.31 O
ATOM 2 P G B 342 115.865 -6.381 202.321 1.00 43.19 P
ATOM 3 OP1 G B 342 116.134 -7.749 202.867 1.00 43.13 O
ATOM 4 OP2 G B 342 116.951 -5.418 202.243 1.00 42.96 O
ATOM 5 O5' G B 342 115.166 -6.474 200.877 1.00 43.72 O
ATOM 6 C5' G B 342 114.239 -7.493 200.588 1.00 44.04 C
ATOM 7 C4' G B 342 113.829 -7.456 199.156 1.00 44.52 C
ATOM 8 O4' G B 342 113.212 -6.182 198.864 1.00 44.59 O
ATOM 9 C3' G B 342 114.944 -7.540 198.139 1.00 44.66 C
ATOM 10 O3' G B 342 115.457 -8.848 197.979 1.00 44.77 O
ATOM 11 C2' G B 342 114.261 -6.995 196.901 1.00 45.10 C
ATOM 12 O2' G B 342 113.360 -7.944 196.388 1.00 45.49 O
ATOM 13 C1' G B 342 113.440 -5.855 197.500 1.00 44.93 C
ATOM 14 N9 G B 342 114.164 -4.575 197.432 1.00 44.73 N
ATOM 15 C8 G B 342 114.804 -3.957 198.446 1.00 44.27 C
ATOM 16 N7 G B 342 115.373 -2.855 198.069 1.00 44.21 N
ATOM 17 C5 G B 342 115.075 -2.757 196.745 1.00 44.65 C
ATOM 18 C6 G B 342 115.400 -1.775 195.815 1.00 44.82 C
ATOM 19 O6 G B 342 116.036 -0.780 195.965 1.00 44.61 O
ATOM 20 N1 G B 342 114.948 -1.979 194.570 1.00 45.30 N
ATOM 21 C2 G B 342 114.246 -3.043 194.260 1.00 45.59 C
ATOM 22 N2 G B 342 113.913 -3.012 192.976 1.00 46.06 N
ATOM 23 N3 G B 342 113.893 -3.995 195.098 1.00 45.45 N
ATOM 24 C4 G B 342 114.332 -3.789 196.330 1.00 44.98 C
ATOM 25 P C B 343 117.042 -9.075 197.949 1.00 40.76 P
ATOM 26 OP1 C B 343 117.291 -10.487 197.638 1.00 40.98 O
ATOM 27 OP2 C B 343 117.612 -8.518 199.218 1.00 40.24 O
ATOM 28 O5' C B 343 117.475 -8.162 196.730 1.00 40.98 O
TER
ATOM 2 P G A 24 113.954 -6.001 187.552 1.00 47.40 P
ATOM 3 OP1 G A 24 115.165 -6.094 186.684 1.00 47.38 O
ATOM 4 OP2 G A 24 112.697 -6.643 187.101 1.00 48.05 O
ATOM 5 O5' G A 24 114.266 -6.499 189.050 1.00 46.75 O
ATOM 6 C5' G A 24 115.443 -6.123 189.739 1.00 46.07 C
ATOM 7 C4' G A 24 115.284 -6.284 191.225 1.00 45.57 C
ATOM 8 O4' G A 24 113.940 -5.899 191.624 1.00 45.81 O
ATOM 9 C3' G A 24 115.441 -7.697 191.763 1.00 45.47 C
ATOM 10 O3' G A 24 116.792 -8.085 191.942 1.00 45.04 O
ATOM 11 C2' G A 24 114.667 -7.654 193.060 1.00 45.24 C
ATOM 12 O2' G A 24 115.468 -7.095 194.081 1.00 44.55 O
ATOM 13 C1' G A 24 113.516 -6.688 192.718 1.00 45.63 C
ATOM 14 N9 G A 24 112.317 -7.448 192.325 1.00 46.26 N
ATOM 15 C8 G A 24 111.769 -7.585 191.071 1.00 46.93 C
ATOM 16 N7 G A 24 110.772 -8.431 191.062 1.00 47.38 N
ATOM 17 C5 G A 24 110.659 -8.907 192.357 1.00 47.00 C
ATOM 18 C6 G A 24 109.793 -9.847 192.953 1.00 47.22 C
ATOM 19 O6 G A 24 108.862 -10.491 192.524 1.00 47.80 O
ATOM 20 N1 G A 24 110.034 -10.042 194.275 1.00 46.70 N
ATOM 21 C2 G A 24 110.993 -9.431 194.965 1.00 46.03 C
ATOM 22 N2 G A 24 111.000 -9.791 196.231 1.00 45.65 N
ATOM 23 N3 G A 24 111.831 -8.557 194.458 1.00 45.80 N
ATOM 24 C4 G A 24 111.614 -8.322 193.147 1.00 46.31 C
ATOM 25 P U A 25 117.278 -9.508 191.366 1.00 44.80 P
ATOM 26 OP1 U A 25 118.777 -9.492 191.361 1.00 44.36 O
ATOM 27 OP2 U A 25 116.558 -9.726 190.076 1.00 45.54 O
ATOM 28 O5' U A 25 116.731 -10.563 192.434 1.00 44.71 O
TER
ATOM 1 O3' A B 341 114.723 -5.697 203.214 1.00 39.31 O
ATOM 2 P G B 342 115.865 -6.381 202.321 1.00 43.19 P
ATOM 3 OP1 G B 342 116.134 -7.749 202.867 1.00 43.13 O
ATOM 4 OP2 G B 342 116.951 -5.418 202.243 1.00 42.96 O
ATOM 5 O5' G B 342 115.166 -6.474 200.877 1.00 43.72 O
ATOM 6 C5' G B 342 114.239 -7.493 200.588 1.00 44.04 C
ATOM 7 C4' G B 342 113.829 -7.456 199.156 1.00 44.52 C
ATOM 8 O4' G B 342 113.212 -6.182 198.864 1.00 44.59 O
ATOM 9 C3' G B 342 114.944 -7.540 198.139 1.00 44.66 C
ATOM 10 O3' G B 342 115.457 -8.848 197.979 1.00 44.77 O
ATOM 11 C2' G B 342 114.261 -6.995 196.901 1.00 45.10 C
ATOM 12 O2' G B 342 113.360 -7.944 196.388 1.00 45.49 O
ATOM 13 C1' G B 342 113.440 -5.855 197.500 1.00 44.93 C
ATOM 14 N9 G B 342 114.164 -4.575 197.432 1.00 44.73 N
ATOM 15 C8 G B 342 114.804 -3.957 198.446 1.00 44.27 C
ATOM 16 N7 G B 342 115.373 -2.855 198.069 1.00 44.21 N
ATOM 17 C5 G B 342 115.075 -2.757 196.745 1.00 44.65 C
ATOM 18 C6 G B 342 115.400 -1.775 195.815 1.00 44.82 C
ATOM 19 O6 G B 342 116.036 -0.780 195.965 1.00 44.61 O
ATOM 20 N1 G B 342 114.948 -1.979 194.570 1.00 45.30 N
ATOM 21 C2 G B 342 114.246 -3.043 194.260 1.00 45.59 C
ATOM 22 N2 G B 342 113.913 -3.012 192.976 1.00 46.06 N
ATOM 23 N3 G B 342 113.893 -3.995 195.098 1.00 45.45 N
ATOM 24 C4 G B 342 114.332 -3.789 196.330 1.00 44.98 C
ATOM 25 P C B 343 117.042 -9.075 197.949 1.00 40.76 P
ATOM 26 OP1 C B 343 117.291 -10.487 197.638 1.00 40.98 O
ATOM 27 OP2 C B 343 117.612 -8.518 199.218 1.00 40.24 O
ATOM 28 O5' C B 343 117.475 -8.162 196.730 1.00 40.98 O
TER
Atoms:
OP1: (115.165,-6.094,186.684)
OP2: (112.697,-6.643,187.101)
C3': (115.441,-7.697,191.763)
C1': (113.516,-6.688,192.718)
C5': (115.443,-6.123,189.739)
O6: (108.862,-10.491,192.524)
O4': (113.940,-5.899,191.624)
C8: (111.769,-7.585,191.071)
C2: (110.993,-9.431,194.965)
C6: (109.793,-9.847,192.953)
C5: (110.659,-8.907,192.357)
C4: (111.614,-8.322,193.147)
P: (113.954,-6.001,187.552)
C4': (115.284,-6.284,191.225)
C2': (114.667,-7.654,193.060)
O2': (115.468,-7.095,194.081)
N1: (110.034,-10.042,194.275)
N2: (111.000,-9.791,196.231)
N3: (111.831,-8.557,194.458)
N7: (110.772,-8.431,191.062)
N9: (112.317,-7.448,192.325)
O5': (114.266,-6.499,189.050)
O3': (116.792,-8.085,191.942)
OP2: (112.697,-6.643,187.101)
C3': (115.441,-7.697,191.763)
C1': (113.516,-6.688,192.718)
C5': (115.443,-6.123,189.739)
O6: (108.862,-10.491,192.524)
O4': (113.940,-5.899,191.624)
C8: (111.769,-7.585,191.071)
C2: (110.993,-9.431,194.965)
C6: (109.793,-9.847,192.953)
C5: (110.659,-8.907,192.357)
C4: (111.614,-8.322,193.147)
P: (113.954,-6.001,187.552)
C4': (115.284,-6.284,191.225)
C2': (114.667,-7.654,193.060)
O2': (115.468,-7.095,194.081)
N1: (110.034,-10.042,194.275)
N2: (111.000,-9.791,196.231)
N3: (111.831,-8.557,194.458)
N7: (110.772,-8.431,191.062)
N9: (112.317,-7.448,192.325)
O5': (114.266,-6.499,189.050)
O3': (116.792,-8.085,191.942)
OP1: (116.134,-7.749,202.867)
OP2: (116.951,-5.418,202.243)
C3': (114.944,-7.540,198.139)
C1': (113.440,-5.855,197.500)
C5': (114.239,-7.493,200.588)
O6: (116.036,-0.780,195.965)
O4': (113.212,-6.182,198.864)
C8: (114.804,-3.957,198.446)
C2: (114.246,-3.043,194.260)
C6: (115.400,-1.775,195.815)
C5: (115.075,-2.757,196.745)
C4: (114.332,-3.789,196.330)
P: (115.865,-6.381,202.321)
C4': (113.829,-7.456,199.156)
C2': (114.261,-6.995,196.901)
O2': (113.360,-7.944,196.388)
N1: (114.948,-1.979,194.570)
N2: (113.913,-3.012,192.976)
N3: (113.893,-3.995,195.098)
N7: (115.373,-2.855,198.069)
N9: (114.164,-4.575,197.432)
O5': (115.166,-6.474,200.877)
O3': (115.457,-8.848,197.979)
OP2: (116.951,-5.418,202.243)
C3': (114.944,-7.540,198.139)
C1': (113.440,-5.855,197.500)
C5': (114.239,-7.493,200.588)
O6: (116.036,-0.780,195.965)
O4': (113.212,-6.182,198.864)
C8: (114.804,-3.957,198.446)
C2: (114.246,-3.043,194.260)
C6: (115.400,-1.775,195.815)
C5: (115.075,-2.757,196.745)
C4: (114.332,-3.789,196.330)
P: (115.865,-6.381,202.321)
C4': (113.829,-7.456,199.156)
C2': (114.261,-6.995,196.901)
O2': (113.360,-7.944,196.388)
N1: (114.948,-1.979,194.570)
N2: (113.913,-3.012,192.976)
N3: (113.893,-3.995,195.098)
N7: (115.373,-2.855,198.069)
N9: (114.164,-4.575,197.432)
O5': (115.166,-6.474,200.877)
O3': (115.457,-8.848,197.979)
Image (generated by PyMOL):