ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:01922:01951

Extra

PDB:
ATOM 1 O3' C A1921 111.044 124.589 108.304 1.00 58.71 O
ATOM 2 P G A1922 110.568 124.401 109.830 1.00 59.39 P
ATOM 3 OP1 G A1922 109.794 125.606 110.228 1.00 59.69 O
ATOM 4 OP2 G A1922 111.742 123.986 110.644 1.00 59.84 O
ATOM 5 O5' G A1922 109.561 123.171 109.776 1.00 58.74 O
ATOM 6 C5' G A1922 108.358 123.245 108.997 1.00 59.23 C
ATOM 7 C4' G A1922 107.636 121.923 109.017 1.00 57.83 C
ATOM 8 O4' G A1922 108.520 120.892 108.512 1.00 59.83 O
ATOM 9 C3' G A1922 107.217 121.412 110.380 1.00 56.68 C
ATOM 10 O3' G A1922 106.002 122.021 110.791 1.00 53.64 O
ATOM 11 C2' G A1922 107.075 119.920 110.122 1.00 59.17 C
ATOM 12 O2' G A1922 105.895 119.605 109.413 1.00 59.25 O
ATOM 13 C1' G A1922 108.260 119.672 109.187 1.00 62.09 C
ATOM 14 N9 G A1922 109.483 119.254 109.871 1.00 65.86 N
ATOM 15 C8 G A1922 110.637 119.984 110.024 1.00 67.93 C
ATOM 16 N7 G A1922 111.568 119.343 110.675 1.00 68.55 N
ATOM 17 C5 G A1922 110.995 118.117 110.971 1.00 69.39 C
ATOM 18 C6 G A1922 111.525 117.005 111.663 1.00 71.97 C
ATOM 19 O6 G A1922 112.652 116.878 112.169 1.00 75.70 O
ATOM 20 N1 G A1922 110.605 115.965 111.743 1.00 71.55 N
ATOM 21 C2 G A1922 109.339 115.992 111.225 1.00 70.37 C
ATOM 22 N2 G A1922 108.603 114.890 111.410 1.00 70.62 N
ATOM 23 N3 G A1922 108.832 117.023 110.575 1.00 69.95 N
ATOM 24 C4 G A1922 109.709 118.045 110.485 1.00 67.86 C
ATOM 25 P U A1923 105.482 121.836 112.302 1.00 53.93 P
ATOM 26 OP1 U A1923 104.615 122.991 112.614 1.00 54.78 O
ATOM 27 OP2 U A1923 106.632 121.526 113.189 1.00 55.37 O
ATOM 28 O5' U A1923 104.565 120.538 112.247 1.00 53.80 O
TER

ATOM 1 O3' U B1950 106.873 109.772 111.709 1.00 87.62 O
ATOM 2 P G B1951 105.270 109.741 111.656 1.00 85.95 P
ATOM 3 OP1 G B1951 104.738 109.030 112.852 1.00 85.47 O
ATOM 4 OP2 G B1951 104.930 109.242 110.295 1.00 86.40 O
ATOM 5 O5' G B1951 104.840 111.271 111.805 1.00 80.53 O
ATOM 6 C5' G B1951 105.673 112.325 111.301 1.00 70.34 C
ATOM 7 C4' G B1951 105.024 112.982 110.105 1.00 62.98 C
ATOM 8 O4' G B1951 105.965 113.924 109.534 1.00 61.11 O
ATOM 9 C3' G B1951 104.666 112.046 108.958 1.00 59.54 C
ATOM 10 O3' G B1951 103.654 112.636 108.145 1.00 58.48 O
ATOM 11 C2' G B1951 105.979 111.974 108.190 1.00 57.54 C
ATOM 12 O2' G B1951 105.803 111.644 106.833 1.00 54.94 O
ATOM 13 C1' G B1951 106.500 113.403 108.334 1.00 58.87 C
ATOM 14 N9 G B1951 107.952 113.523 108.412 1.00 59.94 N
ATOM 15 C8 G B1951 108.848 112.603 108.902 1.00 60.25 C
ATOM 16 N7 G B1951 110.082 113.020 108.863 1.00 60.42 N
ATOM 17 C5 G B1951 109.998 114.287 108.308 1.00 61.16 C
ATOM 18 C6 G B1951 111.010 115.227 108.020 1.00 61.79 C
ATOM 19 O6 G B1951 112.226 115.124 108.200 1.00 63.97 O
ATOM 20 N1 G B1951 110.485 116.388 107.464 1.00 61.08 N
ATOM 21 C2 G B1951 109.158 116.612 107.220 1.00 59.91 C
ATOM 22 N2 G B1951 108.845 117.792 106.690 1.00 59.76 N
ATOM 23 N3 G B1951 108.206 115.743 107.479 1.00 60.30 N
ATOM 24 C4 G B1951 108.692 114.610 108.020 1.00 60.73 C
ATOM 25 P C B1952 102.101 112.366 108.456 1.00 56.97 P
ATOM 26 OP1 C B1952 101.343 113.293 107.588 1.00 56.40 O
ATOM 27 OP2 C B1952 101.915 112.426 109.924 1.00 57.57 O
ATOM 28 O5' C B1952 101.818 110.876 107.954 1.00 58.73 O
TER

Atoms:
OP1: (109.794,125.606,110.228)
OP2: (111.742,123.986,110.644)
C3': (107.217,121.412,110.380)
C1': (108.260,119.672,109.187)
C5': (108.358,123.245,108.997)
O6: (112.652,116.878,112.169)
O4': (108.520,120.892,108.512)
C8: (110.637,119.984,110.024)
C2: (109.339,115.992,111.225)
C6: (111.525,117.005,111.663)
C5: (110.995,118.117,110.971)
C4: (109.709,118.045,110.485)
P: (110.568,124.401,109.830)
C4': (107.636,121.923,109.017)
C2': (107.075,119.920,110.122)
O2': (105.895,119.605,109.413)
N1: (110.605,115.965,111.743)
N2: (108.603,114.890,111.410)
N3: (108.832,117.023,110.575)
N7: (111.568,119.343,110.675)
N9: (109.483,119.254,109.871)
O5': (109.561,123.171,109.776)
O3': (106.002,122.021,110.791)
OP1: (104.738,109.030,112.852)
OP2: (104.930,109.242,110.295)
C3': (104.666,112.046,108.958)
C1': (106.500,113.403,108.334)
C5': (105.673,112.325,111.301)
O6: (112.226,115.124,108.200)
O4': (105.965,113.924,109.534)
C8: (108.848,112.603,108.902)
C2: (109.158,116.612,107.220)
C6: (111.010,115.227,108.020)
C5: (109.998,114.287,108.308)
C4: (108.692,114.610,108.020)
P: (105.270,109.741,111.656)
C4': (105.024,112.982,110.105)
C2': (105.979,111.974,108.190)
O2': (105.803,111.644,106.833)
N1: (110.485,116.388,107.464)
N2: (108.845,117.792,106.690)
N3: (108.206,115.743,107.479)
N7: (110.082,113.020,108.863)
N9: (107.952,113.523,108.412)
O5': (104.840,111.271,111.805)
O3': (103.654,112.636,108.145)
Image (generated by PyMOL):
PyMOL image
show in jmol