ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:01920:01960

Extra

PDB:
ATOM 1 O3' A A1919 122.044 119.181 105.076 1.00 57.02 O
ATOM 2 P G A1920 121.430 120.197 106.166 1.00 58.74 P
ATOM 3 OP1 G A1920 121.805 121.571 105.747 1.00 58.63 O
ATOM 4 OP2 G A1920 121.782 119.723 107.526 1.00 59.55 O
ATOM 5 O5' G A1920 119.859 120.029 106.004 1.00 58.06 O
ATOM 6 C5' G A1920 118.950 121.044 106.459 1.00 54.41 C
ATOM 7 C4' G A1920 118.376 121.791 105.280 1.00 51.82 C
ATOM 8 O4' G A1920 118.333 120.950 104.095 1.00 51.07 O
ATOM 9 C3' G A1920 116.965 122.306 105.483 1.00 50.45 C
ATOM 10 O3' G A1920 116.975 123.586 106.098 1.00 49.41 O
ATOM 11 C2' G A1920 116.401 122.283 104.067 1.00 50.95 C
ATOM 12 O2' G A1920 116.836 123.372 103.278 1.00 49.97 O
ATOM 13 C1' G A1920 117.045 121.007 103.518 1.00 51.55 C
ATOM 14 N9 G A1920 116.354 119.762 103.856 1.00 53.54 N
ATOM 15 C8 G A1920 116.859 118.723 104.605 1.00 53.84 C
ATOM 16 N7 G A1920 116.034 117.719 104.715 1.00 53.85 N
ATOM 17 C5 G A1920 114.913 118.114 104.002 1.00 53.93 C
ATOM 18 C6 G A1920 113.700 117.433 103.759 1.00 54.13 C
ATOM 19 O6 G A1920 113.370 116.296 104.122 1.00 54.18 O
ATOM 20 N1 G A1920 112.825 118.204 103.002 1.00 52.96 N
ATOM 21 C2 G A1920 113.087 119.462 102.532 1.00 51.50 C
ATOM 22 N2 G A1920 112.110 120.041 101.833 1.00 54.13 N
ATOM 23 N3 G A1920 114.220 120.104 102.736 1.00 51.72 N
ATOM 24 C4 G A1920 115.084 119.378 103.475 1.00 53.63 C
ATOM 25 P C A1921 116.286 123.786 107.537 1.00 50.68 P
ATOM 26 OP1 C A1921 116.502 125.203 107.912 1.00 51.09 O
ATOM 27 OP2 C A1921 116.718 122.707 108.456 1.00 49.49 O
ATOM 28 O5' C A1921 114.729 123.594 107.267 1.00 52.75 O
TER

ATOM 1 O3' G B1959 109.380 122.699 93.704 1.00 38.98 O
ATOM 2 P G B1960 109.423 123.393 95.166 1.00 39.70 P
ATOM 3 OP1 G B1960 108.268 122.894 95.960 1.00 38.52 O
ATOM 4 OP2 G B1960 109.622 124.858 95.015 1.00 39.86 O
ATOM 5 O5' G B1960 110.737 122.800 95.840 1.00 41.27 O
ATOM 6 C5' G B1960 110.688 121.611 96.653 1.00 41.82 C
ATOM 7 C4' G B1960 111.839 121.596 97.635 1.00 42.93 C
ATOM 8 O4' G B1960 113.090 121.624 96.897 1.00 42.84 O
ATOM 9 C3' G B1960 111.946 122.793 98.572 1.00 43.14 C
ATOM 10 O3' G B1960 111.113 122.687 99.719 1.00 44.20 O
ATOM 11 C2' G B1960 113.409 122.748 98.961 1.00 43.64 C
ATOM 12 O2' G B1960 113.648 121.733 99.916 1.00 43.18 O
ATOM 13 C1' G B1960 114.051 122.368 97.626 1.00 44.16 C
ATOM 14 N9 G B1960 114.430 123.539 96.840 1.00 44.37 N
ATOM 15 C8 G B1960 113.773 124.076 95.758 1.00 44.62 C
ATOM 16 N7 G B1960 114.369 125.129 95.269 1.00 44.70 N
ATOM 17 C5 G B1960 115.486 125.295 96.076 1.00 45.77 C
ATOM 18 C6 G B1960 116.521 126.265 96.029 1.00 46.84 C
ATOM 19 O6 G B1960 116.673 127.195 95.232 1.00 49.28 O
ATOM 20 N1 G B1960 117.448 126.071 97.044 1.00 47.45 N
ATOM 21 C2 G B1960 117.395 125.071 97.979 1.00 49.01 C
ATOM 22 N2 G B1960 118.379 125.057 98.887 1.00 49.93 N
ATOM 23 N3 G B1960 116.447 124.153 98.025 1.00 48.52 N
ATOM 24 C4 G B1960 115.532 124.325 97.052 1.00 45.79 C
ATOM 25 P A B1961 110.540 124.022 100.409 1.00 45.92 P
ATOM 26 OP1 A B1961 109.609 123.594 101.491 1.00 43.97 O
ATOM 27 OP2 A B1961 110.051 124.941 99.339 1.00 44.13 O
ATOM 28 O5' A B1961 111.823 124.702 101.066 1.00 45.89 O
TER

Atoms:
OP1: (121.805,121.571,105.747)
OP2: (121.782,119.723,107.526)
C3': (116.965,122.306,105.483)
C1': (117.045,121.007,103.518)
C5': (118.950,121.044,106.459)
O6: (113.370,116.296,104.122)
O4': (118.333,120.950,104.095)
C8: (116.859,118.723,104.605)
C2: (113.087,119.462,102.532)
C6: (113.700,117.433,103.759)
C5: (114.913,118.114,104.002)
C4: (115.084,119.378,103.475)
P: (121.430,120.197,106.166)
C4': (118.376,121.791,105.280)
C2': (116.401,122.283,104.067)
O2': (116.836,123.372,103.278)
N1: (112.825,118.204,103.002)
N2: (112.110,120.041,101.833)
N3: (114.220,120.104,102.736)
N7: (116.034,117.719,104.715)
N9: (116.354,119.762,103.856)
O5': (119.859,120.029,106.004)
O3': (116.975,123.586,106.098)
OP1: (108.268,122.894,95.960)
OP2: (109.622,124.858,95.015)
C3': (111.946,122.793,98.572)
C1': (114.051,122.368,97.626)
C5': (110.688,121.611,96.653)
O6: (116.673,127.195,95.232)
O4': (113.090,121.624,96.897)
C8: (113.773,124.076,95.758)
C2: (117.395,125.071,97.979)
C6: (116.521,126.265,96.029)
C5: (115.486,125.295,96.076)
C4: (115.532,124.325,97.052)
P: (109.423,123.393,95.166)
C4': (111.839,121.596,97.635)
C2': (113.409,122.748,98.961)
O2': (113.648,121.733,99.916)
N1: (117.448,126.071,97.044)
N2: (118.379,125.057,98.887)
N3: (116.447,124.153,98.025)
N7: (114.369,125.129,95.269)
N9: (114.430,123.539,96.840)
O5': (110.737,122.800,95.840)
O3': (111.113,122.687,99.719)
Image (generated by PyMOL):
PyMOL image
show in jmol