Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A1581:A1248
Extra
PDB:
ATOM 1 O3' U A1580 21.047 -52.260 10.446 1.00 38.67 O
ATOM 2 P C A1581 20.716 -53.182 9.173 1.00 46.08 P
ATOM 3 OP1 C A1581 20.377 -54.527 9.685 1.00 50.33 O
ATOM 4 OP2 C A1581 21.843 -53.048 8.215 1.00 45.61 O
ATOM 5 O5' C A1581 19.427 -52.485 8.577 1.00 39.16 O
ATOM 6 C5' C A1581 19.560 -51.278 7.862 1.00 39.15 C
ATOM 7 C4' C A1581 18.239 -50.702 7.437 1.00 39.70 C
ATOM 8 O4' C A1581 18.437 -49.294 7.159 1.00 41.97 O
ATOM 9 C3' C A1581 17.642 -51.305 6.160 1.00 40.50 C
ATOM 10 O3' C A1581 16.701 -52.324 6.439 1.00 35.46 O
ATOM 11 C2' C A1581 17.040 -50.120 5.424 1.00 44.04 C
ATOM 12 O2' C A1581 15.708 -49.900 5.859 1.00 42.94 O
ATOM 13 C1' C A1581 17.911 -48.953 5.906 1.00 48.71 C
ATOM 14 N1 C A1581 19.049 -48.660 4.998 1.00 39.13 N
ATOM 15 C2 C A1581 18.905 -47.914 3.818 1.00 50.46 C
ATOM 16 O2 C A1581 17.781 -47.509 3.467 1.00 55.84 O
ATOM 17 N3 C A1581 20.007 -47.670 3.059 1.00 51.21 N
ATOM 18 C4 C A1581 21.202 -48.109 3.437 1.00 40.26 C
ATOM 19 N4 C A1581 22.238 -47.858 2.657 1.00 39.83 N
ATOM 20 C5 C A1581 21.381 -48.841 4.627 1.00 40.76 C
ATOM 21 C6 C A1581 20.291 -49.073 5.366 1.00 40.52 C
ATOM 22 P A A1582 16.668 -53.682 5.570 1.00 54.99 P
ATOM 23 OP1 A A1582 15.397 -54.379 5.908 1.00 65.26 O
ATOM 24 OP2 A A1582 17.940 -54.398 5.808 1.00 60.80 O
ATOM 25 O5' A A1582 16.620 -53.139 4.068 1.00 44.05 O
TER
ATOM 1 O3' C B1247 31.402 -50.141 3.888 1.00 30.98 O
ATOM 2 P G B1248 31.203 -48.902 4.851 1.00 31.89 P
ATOM 3 OP1 G B1248 32.198 -47.872 4.480 1.00 42.20 O
ATOM 4 OP2 G B1248 31.220 -49.436 6.227 1.00 40.34 O
ATOM 5 O5' G B1248 29.736 -48.401 4.450 1.00 47.95 O
ATOM 6 C5' G B1248 29.489 -47.808 3.169 1.00 37.81 C
ATOM 7 C4' G B1248 28.015 -47.790 2.813 1.00 37.81 C
ATOM 8 O4' G B1248 27.531 -49.152 2.686 1.00 40.19 O
ATOM 9 C3' G B1248 27.066 -47.145 3.828 1.00 33.41 C
ATOM 10 O3' G B1248 26.951 -45.745 3.682 1.00 30.62 O
ATOM 11 C2' G B1248 25.757 -47.854 3.545 1.00 39.60 C
ATOM 12 O2' G B1248 25.148 -47.329 2.374 1.00 41.79 O
ATOM 13 C1' G B1248 26.238 -49.260 3.243 1.00 38.28 C
ATOM 14 N9 G B1248 26.331 -50.058 4.472 1.00 37.03 N
ATOM 15 C8 G B1248 27.453 -50.180 5.244 1.00 41.75 C
ATOM 16 N7 G B1248 27.259 -50.941 6.281 1.00 51.19 N
ATOM 17 C5 G B1248 25.933 -51.336 6.177 1.00 40.29 C
ATOM 18 C6 G B1248 25.177 -52.160 7.037 1.00 39.88 C
ATOM 19 O6 G B1248 25.565 -52.717 8.076 1.00 45.61 O
ATOM 20 N1 G B1248 23.875 -52.291 6.584 1.00 34.72 N
ATOM 21 C2 G B1248 23.384 -51.709 5.445 1.00 38.85 C
ATOM 22 N2 G B1248 22.108 -51.955 5.143 1.00 38.76 N
ATOM 23 N3 G B1248 24.082 -50.938 4.645 1.00 40.60 N
ATOM 24 C4 G B1248 25.344 -50.794 5.070 1.00 36.00 C
ATOM 25 P U B1249 28.222 -44.796 3.859 1.00 34.61 P
ATOM 26 OP1 U B1249 29.176 -45.511 4.754 1.00 29.92 O
ATOM 27 OP2 U B1249 27.718 -43.461 4.278 1.00 36.47 O
ATOM 28 O5' U B1249 28.811 -44.688 2.362 1.00 31.37 O
TER
ATOM 2 P C A1581 20.716 -53.182 9.173 1.00 46.08 P
ATOM 3 OP1 C A1581 20.377 -54.527 9.685 1.00 50.33 O
ATOM 4 OP2 C A1581 21.843 -53.048 8.215 1.00 45.61 O
ATOM 5 O5' C A1581 19.427 -52.485 8.577 1.00 39.16 O
ATOM 6 C5' C A1581 19.560 -51.278 7.862 1.00 39.15 C
ATOM 7 C4' C A1581 18.239 -50.702 7.437 1.00 39.70 C
ATOM 8 O4' C A1581 18.437 -49.294 7.159 1.00 41.97 O
ATOM 9 C3' C A1581 17.642 -51.305 6.160 1.00 40.50 C
ATOM 10 O3' C A1581 16.701 -52.324 6.439 1.00 35.46 O
ATOM 11 C2' C A1581 17.040 -50.120 5.424 1.00 44.04 C
ATOM 12 O2' C A1581 15.708 -49.900 5.859 1.00 42.94 O
ATOM 13 C1' C A1581 17.911 -48.953 5.906 1.00 48.71 C
ATOM 14 N1 C A1581 19.049 -48.660 4.998 1.00 39.13 N
ATOM 15 C2 C A1581 18.905 -47.914 3.818 1.00 50.46 C
ATOM 16 O2 C A1581 17.781 -47.509 3.467 1.00 55.84 O
ATOM 17 N3 C A1581 20.007 -47.670 3.059 1.00 51.21 N
ATOM 18 C4 C A1581 21.202 -48.109 3.437 1.00 40.26 C
ATOM 19 N4 C A1581 22.238 -47.858 2.657 1.00 39.83 N
ATOM 20 C5 C A1581 21.381 -48.841 4.627 1.00 40.76 C
ATOM 21 C6 C A1581 20.291 -49.073 5.366 1.00 40.52 C
ATOM 22 P A A1582 16.668 -53.682 5.570 1.00 54.99 P
ATOM 23 OP1 A A1582 15.397 -54.379 5.908 1.00 65.26 O
ATOM 24 OP2 A A1582 17.940 -54.398 5.808 1.00 60.80 O
ATOM 25 O5' A A1582 16.620 -53.139 4.068 1.00 44.05 O
TER
ATOM 1 O3' C B1247 31.402 -50.141 3.888 1.00 30.98 O
ATOM 2 P G B1248 31.203 -48.902 4.851 1.00 31.89 P
ATOM 3 OP1 G B1248 32.198 -47.872 4.480 1.00 42.20 O
ATOM 4 OP2 G B1248 31.220 -49.436 6.227 1.00 40.34 O
ATOM 5 O5' G B1248 29.736 -48.401 4.450 1.00 47.95 O
ATOM 6 C5' G B1248 29.489 -47.808 3.169 1.00 37.81 C
ATOM 7 C4' G B1248 28.015 -47.790 2.813 1.00 37.81 C
ATOM 8 O4' G B1248 27.531 -49.152 2.686 1.00 40.19 O
ATOM 9 C3' G B1248 27.066 -47.145 3.828 1.00 33.41 C
ATOM 10 O3' G B1248 26.951 -45.745 3.682 1.00 30.62 O
ATOM 11 C2' G B1248 25.757 -47.854 3.545 1.00 39.60 C
ATOM 12 O2' G B1248 25.148 -47.329 2.374 1.00 41.79 O
ATOM 13 C1' G B1248 26.238 -49.260 3.243 1.00 38.28 C
ATOM 14 N9 G B1248 26.331 -50.058 4.472 1.00 37.03 N
ATOM 15 C8 G B1248 27.453 -50.180 5.244 1.00 41.75 C
ATOM 16 N7 G B1248 27.259 -50.941 6.281 1.00 51.19 N
ATOM 17 C5 G B1248 25.933 -51.336 6.177 1.00 40.29 C
ATOM 18 C6 G B1248 25.177 -52.160 7.037 1.00 39.88 C
ATOM 19 O6 G B1248 25.565 -52.717 8.076 1.00 45.61 O
ATOM 20 N1 G B1248 23.875 -52.291 6.584 1.00 34.72 N
ATOM 21 C2 G B1248 23.384 -51.709 5.445 1.00 38.85 C
ATOM 22 N2 G B1248 22.108 -51.955 5.143 1.00 38.76 N
ATOM 23 N3 G B1248 24.082 -50.938 4.645 1.00 40.60 N
ATOM 24 C4 G B1248 25.344 -50.794 5.070 1.00 36.00 C
ATOM 25 P U B1249 28.222 -44.796 3.859 1.00 34.61 P
ATOM 26 OP1 U B1249 29.176 -45.511 4.754 1.00 29.92 O
ATOM 27 OP2 U B1249 27.718 -43.461 4.278 1.00 36.47 O
ATOM 28 O5' U B1249 28.811 -44.688 2.362 1.00 31.37 O
TER
Atoms:
C2: (18.905,-47.914,3.818)
OP1: (20.377,-54.527,9.685)
OP2: (21.843,-53.048,8.215)
C4: (21.202,-48.109,3.437)
O5': (19.427,-52.485,8.577)
C3': (17.642,-51.305,6.160)
C1': (17.911,-48.953,5.906)
O4': (18.437,-49.294,7.159)
C5': (19.560,-51.278,7.862)
P: (20.716,-53.182,9.173)
O2: (17.781,-47.509,3.467)
C4': (18.239,-50.702,7.437)
C2': (17.040,-50.120,5.424)
O2': (15.708,-49.900,5.859)
N1: (19.049,-48.660,4.998)
N3: (20.007,-47.670,3.059)
N4: (22.238,-47.858,2.657)
C6: (20.291,-49.073,5.366)
C5: (21.381,-48.841,4.627)
O3': (16.701,-52.324,6.439)
OP1: (20.377,-54.527,9.685)
OP2: (21.843,-53.048,8.215)
C4: (21.202,-48.109,3.437)
O5': (19.427,-52.485,8.577)
C3': (17.642,-51.305,6.160)
C1': (17.911,-48.953,5.906)
O4': (18.437,-49.294,7.159)
C5': (19.560,-51.278,7.862)
P: (20.716,-53.182,9.173)
O2: (17.781,-47.509,3.467)
C4': (18.239,-50.702,7.437)
C2': (17.040,-50.120,5.424)
O2': (15.708,-49.900,5.859)
N1: (19.049,-48.660,4.998)
N3: (20.007,-47.670,3.059)
N4: (22.238,-47.858,2.657)
C6: (20.291,-49.073,5.366)
C5: (21.381,-48.841,4.627)
O3': (16.701,-52.324,6.439)
OP1: (32.198,-47.872,4.480)
OP2: (31.220,-49.436,6.227)
C3': (27.066,-47.145,3.828)
C1': (26.238,-49.260,3.243)
C5': (29.489,-47.808,3.169)
O6: (25.565,-52.717,8.076)
O4': (27.531,-49.152,2.686)
C8: (27.453,-50.180,5.244)
C2: (23.384,-51.709,5.445)
C6: (25.177,-52.160,7.037)
C5: (25.933,-51.336,6.177)
C4: (25.344,-50.794,5.070)
P: (31.203,-48.902,4.851)
C4': (28.015,-47.790,2.813)
C2': (25.757,-47.854,3.545)
O2': (25.148,-47.329,2.374)
N1: (23.875,-52.291,6.584)
N2: (22.108,-51.955,5.143)
N3: (24.082,-50.938,4.645)
N7: (27.259,-50.941,6.281)
N9: (26.331,-50.058,4.472)
O5': (29.736,-48.401,4.450)
O3': (26.951,-45.745,3.682)
OP2: (31.220,-49.436,6.227)
C3': (27.066,-47.145,3.828)
C1': (26.238,-49.260,3.243)
C5': (29.489,-47.808,3.169)
O6: (25.565,-52.717,8.076)
O4': (27.531,-49.152,2.686)
C8: (27.453,-50.180,5.244)
C2: (23.384,-51.709,5.445)
C6: (25.177,-52.160,7.037)
C5: (25.933,-51.336,6.177)
C4: (25.344,-50.794,5.070)
P: (31.203,-48.902,4.851)
C4': (28.015,-47.790,2.813)
C2': (25.757,-47.854,3.545)
O2': (25.148,-47.329,2.374)
N1: (23.875,-52.291,6.584)
N2: (22.108,-51.955,5.143)
N3: (24.082,-50.938,4.645)
N7: (27.259,-50.941,6.281)
N9: (26.331,-50.058,4.472)
O5': (29.736,-48.401,4.450)
O3': (26.951,-45.745,3.682)
Image (generated by PyMOL):