ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1K9M:A2480:A1925

Extra

PDB:
ATOM 1 O3' G A2479 88.853 116.409 105.436 1.00 54.86 O
ATOM 2 P G A2480 88.302 117.932 105.492 1.00 55.24 P
ATOM 3 OP1 G A2480 87.662 118.152 106.824 1.00 55.93 O
ATOM 4 OP2 G A2480 87.513 118.156 104.265 1.00 56.86 O
ATOM 5 O5' G A2480 89.601 118.855 105.388 1.00 51.83 O
ATOM 6 C5' G A2480 90.520 118.971 106.484 1.00 46.28 C
ATOM 7 C4' G A2480 91.723 119.797 106.085 1.00 43.17 C
ATOM 8 O4' G A2480 92.346 119.242 104.894 1.00 42.57 O
ATOM 9 C3' G A2480 91.485 121.234 105.666 1.00 41.32 C
ATOM 10 O3' G A2480 91.273 122.093 106.747 1.00 40.78 O
ATOM 11 C2' G A2480 92.775 121.562 104.937 1.00 40.69 C
ATOM 12 O2' G A2480 93.879 121.701 105.805 1.00 42.13 O
ATOM 13 C1' G A2480 92.972 120.280 104.157 1.00 39.78 C
ATOM 14 N9 G A2480 92.340 120.376 102.854 1.00 38.33 N
ATOM 15 C8 G A2480 91.160 119.799 102.452 1.00 38.89 C
ATOM 16 N7 G A2480 90.895 119.999 101.190 1.00 38.62 N
ATOM 17 C5 G A2480 91.958 120.772 100.742 1.00 38.10 C
ATOM 18 C6 G A2480 92.241 121.272 99.458 1.00 38.09 C
ATOM 19 O6 G A2480 91.619 121.082 98.411 1.00 39.35 O
ATOM 20 N1 G A2480 93.403 122.041 99.452 1.00 36.98 N
ATOM 21 C2 G A2480 94.207 122.265 100.538 1.00 36.28 C
ATOM 22 N2 G A2480 95.282 123.045 100.334 1.00 35.37 N
ATOM 23 N3 G A2480 93.975 121.765 101.738 1.00 36.32 N
ATOM 24 C4 G A2480 92.840 121.038 101.768 1.00 37.35 C
ATOM 25 P U A2481 90.330 123.359 106.545 1.00 39.74 P
ATOM 26 OP1 U A2481 90.233 124.022 107.875 1.00 39.87 O
ATOM 27 OP2 U A2481 89.126 122.840 105.890 1.00 41.67 O
ATOM 28 O5' U A2481 91.110 124.272 105.497 1.00 36.88 O
TER

ATOM 1 O3' A B1924 101.816 125.264 106.981 1.00 49.17 O
ATOM 2 P G B1925 101.198 126.757 106.946 1.00 48.79 P
ATOM 3 OP1 G B1925 102.258 127.588 106.343 1.00 50.46 O
ATOM 4 OP2 G B1925 100.615 127.157 108.253 1.00 47.00 O
ATOM 5 O5' G B1925 100.008 126.673 105.899 1.00 49.12 O
ATOM 6 C5' G B1925 98.639 126.664 106.336 1.00 50.42 C
ATOM 7 C4' G B1925 97.767 126.065 105.268 1.00 50.35 C
ATOM 8 O4' G B1925 97.612 126.996 104.185 1.00 49.74 O
ATOM 9 C3' G B1925 98.341 124.802 104.654 1.00 51.35 C
ATOM 10 O3' G B1925 98.079 123.716 105.589 1.00 52.19 O
ATOM 11 C2' G B1925 97.857 124.831 103.190 1.00 50.89 C
ATOM 12 O2' G B1925 96.934 123.878 102.703 1.00 52.93 O
ATOM 13 C1' G B1925 97.363 126.277 103.010 1.00 50.51 C
ATOM 14 N9 G B1925 97.961 126.997 101.896 1.00 50.22 N
ATOM 15 C8 G B1925 99.298 127.182 101.643 1.00 50.47 C
ATOM 16 N7 G B1925 99.523 127.775 100.503 1.00 49.87 N
ATOM 17 C5 G B1925 98.252 128.020 99.992 1.00 48.63 C
ATOM 18 C6 G B1925 97.847 128.606 98.777 1.00 47.25 C
ATOM 19 O6 G B1925 98.544 129.055 97.873 1.00 48.24 O
ATOM 20 N1 G B1925 96.469 128.638 98.661 1.00 47.05 N
ATOM 21 C2 G B1925 95.587 128.167 99.591 1.00 48.35 C
ATOM 22 N2 G B1925 94.275 128.274 99.278 1.00 50.06 N
ATOM 23 N3 G B1925 95.950 127.625 100.733 1.00 48.85 N
ATOM 24 C4 G B1925 97.284 127.575 100.860 1.00 49.23 C
ATOM 25 P U B1926 97.527 122.279 105.111 1.00 51.08 P
ATOM 26 OP1 U B1926 96.219 122.518 104.479 1.00 51.86 O
ATOM 27 OP2 U B1926 97.598 121.387 106.292 1.00 51.28 O
ATOM 28 O5' U B1926 98.575 121.723 104.045 1.00 50.23 O
TER

Atoms:
OP1: (87.662,118.152,106.824)
OP2: (87.513,118.156,104.265)
C3': (91.485,121.234,105.666)
C1': (92.972,120.280,104.157)
C5': (90.520,118.971,106.484)
O6: (91.619,121.082,98.411)
O4': (92.346,119.242,104.894)
C8: (91.160,119.799,102.452)
C2: (94.207,122.265,100.538)
C6: (92.241,121.272,99.458)
C5: (91.958,120.772,100.742)
C4: (92.840,121.038,101.768)
P: (88.302,117.932,105.492)
C4': (91.723,119.797,106.085)
C2': (92.775,121.562,104.937)
O2': (93.879,121.701,105.805)
N1: (93.403,122.041,99.452)
N2: (95.282,123.045,100.334)
N3: (93.975,121.765,101.738)
N7: (90.895,119.999,101.190)
N9: (92.340,120.376,102.854)
O5': (89.601,118.855,105.388)
O3': (91.273,122.093,106.747)
OP1: (102.258,127.588,106.343)
OP2: (100.615,127.157,108.253)
C3': (98.341,124.802,104.654)
C1': (97.363,126.277,103.010)
C5': (98.639,126.664,106.336)
O6: (98.544,129.055,97.873)
O4': (97.612,126.996,104.185)
C8: (99.298,127.182,101.643)
C2: (95.587,128.167,99.591)
C6: (97.847,128.606,98.777)
C5: (98.252,128.020,99.992)
C4: (97.284,127.575,100.860)
P: (101.198,126.757,106.946)
C4': (97.767,126.065,105.268)
C2': (97.857,124.831,103.190)
O2': (96.934,123.878,102.703)
N1: (96.469,128.638,98.661)
N2: (94.275,128.274,99.278)
N3: (95.950,127.625,100.733)
N7: (99.523,127.775,100.503)
N9: (97.961,126.997,101.896)
O5': (100.008,126.673,105.899)
O3': (98.079,123.716,105.589)
Image (generated by PyMOL):
PyMOL image
show in jmol