Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A2254:A2221
Extra
PDB:
ATOM 1 O3' U A2253 110.010 -35.415 -38.836 1.00 64.54 O
ATOM 2 P C A2254 108.521 -35.714 -39.369 1.00 41.77 P
ATOM 3 OP1 C A2254 108.227 -34.778 -40.478 1.00 37.18 O
ATOM 4 OP2 C A2254 107.650 -35.709 -38.162 1.00 49.68 O
ATOM 5 O5' C A2254 108.656 -37.184 -39.938 1.00 36.50 O
ATOM 6 C5' C A2254 108.734 -37.415 -41.321 1.00 27.22 C
ATOM 7 C4' C A2254 107.760 -38.467 -41.724 1.00 32.99 C
ATOM 8 O4' C A2254 107.729 -38.579 -43.162 1.00 35.11 O
ATOM 9 C3' C A2254 108.068 -39.874 -41.270 1.00 32.06 C
ATOM 10 O3' C A2254 107.793 -40.113 -39.890 1.00 25.28 O
ATOM 11 C2' C A2254 107.208 -40.683 -42.224 1.00 32.41 C
ATOM 12 O2' C A2254 105.845 -40.584 -41.862 1.00 31.74 O
ATOM 13 C1' C A2254 107.411 -39.902 -43.522 1.00 31.44 C
ATOM 14 N1 C A2254 108.522 -40.441 -44.295 1.00 29.27 N
ATOM 15 C2 C A2254 108.305 -41.477 -45.173 1.00 27.88 C
ATOM 16 O2 C A2254 107.178 -41.897 -45.322 1.00 27.23 O
ATOM 17 N3 C A2254 109.340 -41.989 -45.846 1.00 35.40 N
ATOM 18 C4 C A2254 110.573 -41.516 -45.662 1.00 35.50 C
ATOM 19 N4 C A2254 111.583 -42.063 -46.354 1.00 36.88 N
ATOM 20 C5 C A2254 110.815 -40.448 -44.764 1.00 35.39 C
ATOM 21 C6 C A2254 109.770 -39.955 -44.099 1.00 33.20 C
ATOM 22 P A A2255 108.165 -41.551 -39.240 1.00 30.86 P
ATOM 23 OP1 A A2255 109.107 -42.216 -40.173 1.00 28.02 O
ATOM 24 OP2 A A2255 106.904 -42.248 -38.919 1.00 42.59 O
ATOM 25 O5' A A2255 108.891 -41.151 -37.898 1.00 32.63 O
TER
ATOM 1 O3' U B2220 120.663 -42.039 -45.769 1.00 41.95 O
ATOM 2 P G B2221 119.770 -41.565 -47.006 1.00 42.10 P
ATOM 3 OP1 G B2221 120.142 -42.408 -48.160 1.00 47.04 O
ATOM 4 OP2 G B2221 119.921 -40.094 -47.110 1.00 40.49 O
ATOM 5 O5' G B2221 118.302 -41.925 -46.524 1.00 41.32 O
ATOM 6 C5' G B2221 117.942 -43.274 -46.297 1.00 38.98 C
ATOM 7 C4' G B2221 116.455 -43.461 -46.272 1.00 34.53 C
ATOM 8 O4' G B2221 115.946 -43.108 -44.949 1.00 35.44 O
ATOM 9 C3' G B2221 115.672 -42.614 -47.281 1.00 33.53 C
ATOM 10 O3' G B2221 114.680 -43.423 -47.940 1.00 21.44 O
ATOM 11 C2' G B2221 115.014 -41.549 -46.384 1.00 33.89 C
ATOM 12 O2' G B2221 113.825 -40.979 -46.883 1.00 28.45 O
ATOM 13 C1' G B2221 114.783 -42.341 -45.111 1.00 33.05 C
ATOM 14 N9 G B2221 114.544 -41.524 -43.918 1.00 28.57 N
ATOM 15 C8 G B2221 115.135 -40.388 -43.465 1.00 37.35 C
ATOM 16 N7 G B2221 114.566 -39.901 -42.396 1.00 35.39 N
ATOM 17 C5 G B2221 113.507 -40.749 -42.144 1.00 33.25 C
ATOM 18 C6 G B2221 112.509 -40.741 -41.136 1.00 35.57 C
ATOM 19 O6 G B2221 112.335 -39.970 -40.197 1.00 41.09 O
ATOM 20 N1 G B2221 111.627 -41.789 -41.271 1.00 36.71 N
ATOM 21 C2 G B2221 111.670 -42.742 -42.252 1.00 38.83 C
ATOM 22 N2 G B2221 110.724 -43.688 -42.207 1.00 37.34 N
ATOM 23 N3 G B2221 112.582 -42.764 -43.207 1.00 40.74 N
ATOM 24 C4 G B2221 113.474 -41.744 -43.084 1.00 35.64 C
ATOM 25 P A B2222 114.517 -43.343 -49.548 1.00 41.32 P
ATOM 26 OP1 A B2222 115.848 -43.079 -50.120 1.00 47.91 O
ATOM 27 OP2 A B2222 113.422 -42.372 -49.823 1.00 38.77 O
ATOM 28 O5' A B2222 114.052 -44.806 -49.957 1.00 37.04 O
TER
ATOM 2 P C A2254 108.521 -35.714 -39.369 1.00 41.77 P
ATOM 3 OP1 C A2254 108.227 -34.778 -40.478 1.00 37.18 O
ATOM 4 OP2 C A2254 107.650 -35.709 -38.162 1.00 49.68 O
ATOM 5 O5' C A2254 108.656 -37.184 -39.938 1.00 36.50 O
ATOM 6 C5' C A2254 108.734 -37.415 -41.321 1.00 27.22 C
ATOM 7 C4' C A2254 107.760 -38.467 -41.724 1.00 32.99 C
ATOM 8 O4' C A2254 107.729 -38.579 -43.162 1.00 35.11 O
ATOM 9 C3' C A2254 108.068 -39.874 -41.270 1.00 32.06 C
ATOM 10 O3' C A2254 107.793 -40.113 -39.890 1.00 25.28 O
ATOM 11 C2' C A2254 107.208 -40.683 -42.224 1.00 32.41 C
ATOM 12 O2' C A2254 105.845 -40.584 -41.862 1.00 31.74 O
ATOM 13 C1' C A2254 107.411 -39.902 -43.522 1.00 31.44 C
ATOM 14 N1 C A2254 108.522 -40.441 -44.295 1.00 29.27 N
ATOM 15 C2 C A2254 108.305 -41.477 -45.173 1.00 27.88 C
ATOM 16 O2 C A2254 107.178 -41.897 -45.322 1.00 27.23 O
ATOM 17 N3 C A2254 109.340 -41.989 -45.846 1.00 35.40 N
ATOM 18 C4 C A2254 110.573 -41.516 -45.662 1.00 35.50 C
ATOM 19 N4 C A2254 111.583 -42.063 -46.354 1.00 36.88 N
ATOM 20 C5 C A2254 110.815 -40.448 -44.764 1.00 35.39 C
ATOM 21 C6 C A2254 109.770 -39.955 -44.099 1.00 33.20 C
ATOM 22 P A A2255 108.165 -41.551 -39.240 1.00 30.86 P
ATOM 23 OP1 A A2255 109.107 -42.216 -40.173 1.00 28.02 O
ATOM 24 OP2 A A2255 106.904 -42.248 -38.919 1.00 42.59 O
ATOM 25 O5' A A2255 108.891 -41.151 -37.898 1.00 32.63 O
TER
ATOM 1 O3' U B2220 120.663 -42.039 -45.769 1.00 41.95 O
ATOM 2 P G B2221 119.770 -41.565 -47.006 1.00 42.10 P
ATOM 3 OP1 G B2221 120.142 -42.408 -48.160 1.00 47.04 O
ATOM 4 OP2 G B2221 119.921 -40.094 -47.110 1.00 40.49 O
ATOM 5 O5' G B2221 118.302 -41.925 -46.524 1.00 41.32 O
ATOM 6 C5' G B2221 117.942 -43.274 -46.297 1.00 38.98 C
ATOM 7 C4' G B2221 116.455 -43.461 -46.272 1.00 34.53 C
ATOM 8 O4' G B2221 115.946 -43.108 -44.949 1.00 35.44 O
ATOM 9 C3' G B2221 115.672 -42.614 -47.281 1.00 33.53 C
ATOM 10 O3' G B2221 114.680 -43.423 -47.940 1.00 21.44 O
ATOM 11 C2' G B2221 115.014 -41.549 -46.384 1.00 33.89 C
ATOM 12 O2' G B2221 113.825 -40.979 -46.883 1.00 28.45 O
ATOM 13 C1' G B2221 114.783 -42.341 -45.111 1.00 33.05 C
ATOM 14 N9 G B2221 114.544 -41.524 -43.918 1.00 28.57 N
ATOM 15 C8 G B2221 115.135 -40.388 -43.465 1.00 37.35 C
ATOM 16 N7 G B2221 114.566 -39.901 -42.396 1.00 35.39 N
ATOM 17 C5 G B2221 113.507 -40.749 -42.144 1.00 33.25 C
ATOM 18 C6 G B2221 112.509 -40.741 -41.136 1.00 35.57 C
ATOM 19 O6 G B2221 112.335 -39.970 -40.197 1.00 41.09 O
ATOM 20 N1 G B2221 111.627 -41.789 -41.271 1.00 36.71 N
ATOM 21 C2 G B2221 111.670 -42.742 -42.252 1.00 38.83 C
ATOM 22 N2 G B2221 110.724 -43.688 -42.207 1.00 37.34 N
ATOM 23 N3 G B2221 112.582 -42.764 -43.207 1.00 40.74 N
ATOM 24 C4 G B2221 113.474 -41.744 -43.084 1.00 35.64 C
ATOM 25 P A B2222 114.517 -43.343 -49.548 1.00 41.32 P
ATOM 26 OP1 A B2222 115.848 -43.079 -50.120 1.00 47.91 O
ATOM 27 OP2 A B2222 113.422 -42.372 -49.823 1.00 38.77 O
ATOM 28 O5' A B2222 114.052 -44.806 -49.957 1.00 37.04 O
TER
Atoms:
C2: (108.305,-41.477,-45.173)
OP1: (108.227,-34.778,-40.478)
OP2: (107.650,-35.709,-38.162)
C4: (110.573,-41.516,-45.662)
O5': (108.656,-37.184,-39.938)
C3': (108.068,-39.874,-41.270)
C1': (107.411,-39.902,-43.522)
O4': (107.729,-38.579,-43.162)
C5': (108.734,-37.415,-41.321)
P: (108.521,-35.714,-39.369)
O2: (107.178,-41.897,-45.322)
C4': (107.760,-38.467,-41.724)
C2': (107.208,-40.683,-42.224)
O2': (105.845,-40.584,-41.862)
N1: (108.522,-40.441,-44.295)
N3: (109.340,-41.989,-45.846)
N4: (111.583,-42.063,-46.354)
C6: (109.770,-39.955,-44.099)
C5: (110.815,-40.448,-44.764)
O3': (107.793,-40.113,-39.890)
OP1: (108.227,-34.778,-40.478)
OP2: (107.650,-35.709,-38.162)
C4: (110.573,-41.516,-45.662)
O5': (108.656,-37.184,-39.938)
C3': (108.068,-39.874,-41.270)
C1': (107.411,-39.902,-43.522)
O4': (107.729,-38.579,-43.162)
C5': (108.734,-37.415,-41.321)
P: (108.521,-35.714,-39.369)
O2: (107.178,-41.897,-45.322)
C4': (107.760,-38.467,-41.724)
C2': (107.208,-40.683,-42.224)
O2': (105.845,-40.584,-41.862)
N1: (108.522,-40.441,-44.295)
N3: (109.340,-41.989,-45.846)
N4: (111.583,-42.063,-46.354)
C6: (109.770,-39.955,-44.099)
C5: (110.815,-40.448,-44.764)
O3': (107.793,-40.113,-39.890)
OP1: (120.142,-42.408,-48.160)
OP2: (119.921,-40.094,-47.110)
C3': (115.672,-42.614,-47.281)
C1': (114.783,-42.341,-45.111)
C5': (117.942,-43.274,-46.297)
O6: (112.335,-39.970,-40.197)
O4': (115.946,-43.108,-44.949)
C8: (115.135,-40.388,-43.465)
C2: (111.670,-42.742,-42.252)
C6: (112.509,-40.741,-41.136)
C5: (113.507,-40.749,-42.144)
C4: (113.474,-41.744,-43.084)
P: (119.770,-41.565,-47.006)
C4': (116.455,-43.461,-46.272)
C2': (115.014,-41.549,-46.384)
O2': (113.825,-40.979,-46.883)
N1: (111.627,-41.789,-41.271)
N2: (110.724,-43.688,-42.207)
N3: (112.582,-42.764,-43.207)
N7: (114.566,-39.901,-42.396)
N9: (114.544,-41.524,-43.918)
O5': (118.302,-41.925,-46.524)
O3': (114.680,-43.423,-47.940)
OP2: (119.921,-40.094,-47.110)
C3': (115.672,-42.614,-47.281)
C1': (114.783,-42.341,-45.111)
C5': (117.942,-43.274,-46.297)
O6: (112.335,-39.970,-40.197)
O4': (115.946,-43.108,-44.949)
C8: (115.135,-40.388,-43.465)
C2: (111.670,-42.742,-42.252)
C6: (112.509,-40.741,-41.136)
C5: (113.507,-40.749,-42.144)
C4: (113.474,-41.744,-43.084)
P: (119.770,-41.565,-47.006)
C4': (116.455,-43.461,-46.272)
C2': (115.014,-41.549,-46.384)
O2': (113.825,-40.979,-46.883)
N1: (111.627,-41.789,-41.271)
N2: (110.724,-43.688,-42.207)
N3: (112.582,-42.764,-43.207)
N7: (114.566,-39.901,-42.396)
N9: (114.544,-41.524,-43.918)
O5': (118.302,-41.925,-46.524)
O3': (114.680,-43.423,-47.940)
Image (generated by PyMOL):