Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1920:A1960
Extra
PDB:
ATOM 1 O3' A A1919 122.136 119.587 105.535 1.00 67.26 O
ATOM 2 P G A1920 121.441 120.458 106.715 1.00 68.40 P
ATOM 3 OP1 G A1920 122.059 121.816 106.835 1.00 70.07 O
ATOM 4 OP2 G A1920 121.315 119.616 107.917 1.00 69.10 O
ATOM 5 O5' G A1920 119.978 120.704 106.176 1.00 68.66 O
ATOM 6 C5' G A1920 119.163 121.719 106.719 1.00 65.85 C
ATOM 7 C4' G A1920 118.306 122.280 105.626 1.00 64.95 C
ATOM 8 O4' G A1920 118.109 121.264 104.602 1.00 64.56 O
ATOM 9 C3' G A1920 116.919 122.708 106.057 1.00 63.81 C
ATOM 10 O3' G A1920 116.919 124.031 106.585 1.00 63.71 O
ATOM 11 C2' G A1920 116.119 122.544 104.772 1.00 63.84 C
ATOM 12 O2' G A1920 116.306 123.653 103.912 1.00 61.99 O
ATOM 13 C1' G A1920 116.773 121.295 104.156 1.00 63.96 C
ATOM 14 N9 G A1920 116.144 120.015 104.505 1.00 63.62 N
ATOM 15 C8 G A1920 116.655 118.996 105.289 1.00 62.75 C
ATOM 16 N7 G A1920 115.850 117.970 105.388 1.00 63.19 N
ATOM 17 C5 G A1920 114.744 118.328 104.624 1.00 63.56 C
ATOM 18 C6 G A1920 113.551 117.618 104.343 1.00 63.80 C
ATOM 19 O6 G A1920 113.236 116.471 104.684 1.00 64.65 O
ATOM 20 N1 G A1920 112.680 118.377 103.565 1.00 63.95 N
ATOM 21 C2 G A1920 112.935 119.642 103.092 1.00 62.37 C
ATOM 22 N2 G A1920 111.962 120.216 102.385 1.00 62.92 N
ATOM 23 N3 G A1920 114.055 120.294 103.307 1.00 61.42 N
ATOM 24 C4 G A1920 114.906 119.591 104.085 1.00 62.99 C
ATOM 25 P C A1921 116.228 124.314 108.015 1.00 63.63 P
ATOM 26 OP1 C A1921 116.348 125.738 108.385 1.00 62.46 O
ATOM 27 OP2 C A1921 116.720 123.268 108.942 1.00 63.94 O
ATOM 28 O5' C A1921 114.691 124.057 107.739 1.00 64.00 O
TER
ATOM 1 O3' G B1959 109.473 122.900 94.349 1.00 46.75 O
ATOM 2 P G B1960 109.456 123.775 95.695 1.00 45.73 P
ATOM 3 OP1 G B1960 108.280 123.323 96.451 1.00 45.09 O
ATOM 4 OP2 G B1960 109.635 125.223 95.388 1.00 43.61 O
ATOM 5 O5' G B1960 110.724 123.276 96.503 1.00 46.26 O
ATOM 6 C5' G B1960 110.644 122.089 97.303 1.00 47.08 C
ATOM 7 C4' G B1960 111.757 122.066 98.315 1.00 47.80 C
ATOM 8 O4' G B1960 113.023 121.925 97.640 1.00 48.10 O
ATOM 9 C3' G B1960 111.900 123.328 99.148 1.00 47.69 C
ATOM 10 O3' G B1960 111.055 123.285 100.272 1.00 48.01 O
ATOM 11 C2' G B1960 113.351 123.275 99.569 1.00 48.39 C
ATOM 12 O2' G B1960 113.557 122.422 100.685 1.00 50.03 O
ATOM 13 C1' G B1960 113.990 122.696 98.313 1.00 48.90 C
ATOM 14 N9 G B1960 114.354 123.814 97.463 1.00 49.33 N
ATOM 15 C8 G B1960 113.711 124.290 96.352 1.00 49.86 C
ATOM 16 N7 G B1960 114.317 125.311 95.812 1.00 49.74 N
ATOM 17 C5 G B1960 115.415 125.518 96.628 1.00 49.31 C
ATOM 18 C6 G B1960 116.447 126.458 96.538 1.00 49.02 C
ATOM 19 O6 G B1960 116.605 127.330 95.692 1.00 49.88 O
ATOM 20 N1 G B1960 117.374 126.306 97.563 1.00 49.76 N
ATOM 21 C2 G B1960 117.311 125.348 98.541 1.00 51.29 C
ATOM 22 N2 G B1960 118.313 125.315 99.432 1.00 53.26 N
ATOM 23 N3 G B1960 116.338 124.468 98.637 1.00 51.35 N
ATOM 24 C4 G B1960 115.438 124.606 97.652 1.00 49.93 C
ATOM 25 P A B1961 110.484 124.644 100.903 1.00 49.42 P
ATOM 26 OP1 A B1961 109.524 124.179 101.918 1.00 49.31 O
ATOM 27 OP2 A B1961 110.048 125.609 99.854 1.00 48.65 O
ATOM 28 O5' A B1961 111.724 125.261 101.671 1.00 51.54 O
TER
ATOM 2 P G A1920 121.441 120.458 106.715 1.00 68.40 P
ATOM 3 OP1 G A1920 122.059 121.816 106.835 1.00 70.07 O
ATOM 4 OP2 G A1920 121.315 119.616 107.917 1.00 69.10 O
ATOM 5 O5' G A1920 119.978 120.704 106.176 1.00 68.66 O
ATOM 6 C5' G A1920 119.163 121.719 106.719 1.00 65.85 C
ATOM 7 C4' G A1920 118.306 122.280 105.626 1.00 64.95 C
ATOM 8 O4' G A1920 118.109 121.264 104.602 1.00 64.56 O
ATOM 9 C3' G A1920 116.919 122.708 106.057 1.00 63.81 C
ATOM 10 O3' G A1920 116.919 124.031 106.585 1.00 63.71 O
ATOM 11 C2' G A1920 116.119 122.544 104.772 1.00 63.84 C
ATOM 12 O2' G A1920 116.306 123.653 103.912 1.00 61.99 O
ATOM 13 C1' G A1920 116.773 121.295 104.156 1.00 63.96 C
ATOM 14 N9 G A1920 116.144 120.015 104.505 1.00 63.62 N
ATOM 15 C8 G A1920 116.655 118.996 105.289 1.00 62.75 C
ATOM 16 N7 G A1920 115.850 117.970 105.388 1.00 63.19 N
ATOM 17 C5 G A1920 114.744 118.328 104.624 1.00 63.56 C
ATOM 18 C6 G A1920 113.551 117.618 104.343 1.00 63.80 C
ATOM 19 O6 G A1920 113.236 116.471 104.684 1.00 64.65 O
ATOM 20 N1 G A1920 112.680 118.377 103.565 1.00 63.95 N
ATOM 21 C2 G A1920 112.935 119.642 103.092 1.00 62.37 C
ATOM 22 N2 G A1920 111.962 120.216 102.385 1.00 62.92 N
ATOM 23 N3 G A1920 114.055 120.294 103.307 1.00 61.42 N
ATOM 24 C4 G A1920 114.906 119.591 104.085 1.00 62.99 C
ATOM 25 P C A1921 116.228 124.314 108.015 1.00 63.63 P
ATOM 26 OP1 C A1921 116.348 125.738 108.385 1.00 62.46 O
ATOM 27 OP2 C A1921 116.720 123.268 108.942 1.00 63.94 O
ATOM 28 O5' C A1921 114.691 124.057 107.739 1.00 64.00 O
TER
ATOM 1 O3' G B1959 109.473 122.900 94.349 1.00 46.75 O
ATOM 2 P G B1960 109.456 123.775 95.695 1.00 45.73 P
ATOM 3 OP1 G B1960 108.280 123.323 96.451 1.00 45.09 O
ATOM 4 OP2 G B1960 109.635 125.223 95.388 1.00 43.61 O
ATOM 5 O5' G B1960 110.724 123.276 96.503 1.00 46.26 O
ATOM 6 C5' G B1960 110.644 122.089 97.303 1.00 47.08 C
ATOM 7 C4' G B1960 111.757 122.066 98.315 1.00 47.80 C
ATOM 8 O4' G B1960 113.023 121.925 97.640 1.00 48.10 O
ATOM 9 C3' G B1960 111.900 123.328 99.148 1.00 47.69 C
ATOM 10 O3' G B1960 111.055 123.285 100.272 1.00 48.01 O
ATOM 11 C2' G B1960 113.351 123.275 99.569 1.00 48.39 C
ATOM 12 O2' G B1960 113.557 122.422 100.685 1.00 50.03 O
ATOM 13 C1' G B1960 113.990 122.696 98.313 1.00 48.90 C
ATOM 14 N9 G B1960 114.354 123.814 97.463 1.00 49.33 N
ATOM 15 C8 G B1960 113.711 124.290 96.352 1.00 49.86 C
ATOM 16 N7 G B1960 114.317 125.311 95.812 1.00 49.74 N
ATOM 17 C5 G B1960 115.415 125.518 96.628 1.00 49.31 C
ATOM 18 C6 G B1960 116.447 126.458 96.538 1.00 49.02 C
ATOM 19 O6 G B1960 116.605 127.330 95.692 1.00 49.88 O
ATOM 20 N1 G B1960 117.374 126.306 97.563 1.00 49.76 N
ATOM 21 C2 G B1960 117.311 125.348 98.541 1.00 51.29 C
ATOM 22 N2 G B1960 118.313 125.315 99.432 1.00 53.26 N
ATOM 23 N3 G B1960 116.338 124.468 98.637 1.00 51.35 N
ATOM 24 C4 G B1960 115.438 124.606 97.652 1.00 49.93 C
ATOM 25 P A B1961 110.484 124.644 100.903 1.00 49.42 P
ATOM 26 OP1 A B1961 109.524 124.179 101.918 1.00 49.31 O
ATOM 27 OP2 A B1961 110.048 125.609 99.854 1.00 48.65 O
ATOM 28 O5' A B1961 111.724 125.261 101.671 1.00 51.54 O
TER
Atoms:
OP1: (122.059,121.816,106.835)
OP2: (121.315,119.616,107.917)
C3': (116.919,122.708,106.057)
C1': (116.773,121.295,104.156)
C5': (119.163,121.719,106.719)
O6: (113.236,116.471,104.684)
O4': (118.109,121.264,104.602)
C8: (116.655,118.996,105.289)
C2: (112.935,119.642,103.092)
C6: (113.551,117.618,104.343)
C5: (114.744,118.328,104.624)
C4: (114.906,119.591,104.085)
P: (121.441,120.458,106.715)
C4': (118.306,122.280,105.626)
C2': (116.119,122.544,104.772)
O2': (116.306,123.653,103.912)
N1: (112.680,118.377,103.565)
N2: (111.962,120.216,102.385)
N3: (114.055,120.294,103.307)
N7: (115.850,117.970,105.388)
N9: (116.144,120.015,104.505)
O5': (119.978,120.704,106.176)
O3': (116.919,124.031,106.585)
OP2: (121.315,119.616,107.917)
C3': (116.919,122.708,106.057)
C1': (116.773,121.295,104.156)
C5': (119.163,121.719,106.719)
O6: (113.236,116.471,104.684)
O4': (118.109,121.264,104.602)
C8: (116.655,118.996,105.289)
C2: (112.935,119.642,103.092)
C6: (113.551,117.618,104.343)
C5: (114.744,118.328,104.624)
C4: (114.906,119.591,104.085)
P: (121.441,120.458,106.715)
C4': (118.306,122.280,105.626)
C2': (116.119,122.544,104.772)
O2': (116.306,123.653,103.912)
N1: (112.680,118.377,103.565)
N2: (111.962,120.216,102.385)
N3: (114.055,120.294,103.307)
N7: (115.850,117.970,105.388)
N9: (116.144,120.015,104.505)
O5': (119.978,120.704,106.176)
O3': (116.919,124.031,106.585)
OP1: (108.280,123.323,96.451)
OP2: (109.635,125.223,95.388)
C3': (111.900,123.328,99.148)
C1': (113.990,122.696,98.313)
C5': (110.644,122.089,97.303)
O6: (116.605,127.330,95.692)
O4': (113.023,121.925,97.640)
C8: (113.711,124.290,96.352)
C2: (117.311,125.348,98.541)
C6: (116.447,126.458,96.538)
C5: (115.415,125.518,96.628)
C4: (115.438,124.606,97.652)
P: (109.456,123.775,95.695)
C4': (111.757,122.066,98.315)
C2': (113.351,123.275,99.569)
O2': (113.557,122.422,100.685)
N1: (117.374,126.306,97.563)
N2: (118.313,125.315,99.432)
N3: (116.338,124.468,98.637)
N7: (114.317,125.311,95.812)
N9: (114.354,123.814,97.463)
O5': (110.724,123.276,96.503)
O3': (111.055,123.285,100.272)
OP2: (109.635,125.223,95.388)
C3': (111.900,123.328,99.148)
C1': (113.990,122.696,98.313)
C5': (110.644,122.089,97.303)
O6: (116.605,127.330,95.692)
O4': (113.023,121.925,97.640)
C8: (113.711,124.290,96.352)
C2: (117.311,125.348,98.541)
C6: (116.447,126.458,96.538)
C5: (115.415,125.518,96.628)
C4: (115.438,124.606,97.652)
P: (109.456,123.775,95.695)
C4': (111.757,122.066,98.315)
C2': (113.351,123.275,99.569)
O2': (113.557,122.422,100.685)
N1: (117.374,126.306,97.563)
N2: (118.313,125.315,99.432)
N3: (116.338,124.468,98.637)
N7: (114.317,125.311,95.812)
N9: (114.354,123.814,97.463)
O5': (110.724,123.276,96.503)
O3': (111.055,123.285,100.272)
Image (generated by PyMOL):