Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A2838:A2684
Extra
PDB:
ATOM 1 O3' U A2837 -9.392 68.622 177.474 1.00 16.50 O
ATOM 2 P G A2838 -8.609 68.445 176.096 1.00 9.88 P
ATOM 3 OP1 G A2838 -9.624 68.328 175.041 1.00 9.88 O
ATOM 4 OP2 G A2838 -7.627 67.348 176.286 1.00 9.88 O
ATOM 5 O5' G A2838 -7.855 69.821 175.952 1.00 9.88 O
ATOM 6 C5' G A2838 -8.518 70.931 175.412 1.00 9.88 C
ATOM 7 C4' G A2838 -7.603 72.101 175.358 1.00 9.88 C
ATOM 8 O4' G A2838 -6.928 72.229 176.625 1.00 9.88 O
ATOM 9 C3' G A2838 -6.469 72.008 174.364 1.00 9.88 C
ATOM 10 O3' G A2838 -6.880 72.288 173.033 1.00 9.88 O
ATOM 11 C2' G A2838 -5.470 73.004 174.932 1.00 9.88 C
ATOM 12 O2' G A2838 -5.862 74.331 174.635 1.00 9.88 O
ATOM 13 C1' G A2838 -5.652 72.783 176.433 1.00 9.88 C
ATOM 14 N9 G A2838 -4.669 71.854 176.999 1.00 10.24 N
ATOM 15 C8 G A2838 -4.947 70.550 177.314 1.00 10.24 C
ATOM 16 N7 G A2838 -3.926 69.924 177.833 1.00 10.24 N
ATOM 17 C5 G A2838 -2.925 70.882 177.878 1.00 10.24 C
ATOM 18 C6 G A2838 -1.597 70.782 178.346 1.00 10.24 C
ATOM 19 O6 G A2838 -1.032 69.799 178.812 1.00 10.24 O
ATOM 20 N1 G A2838 -0.907 71.967 178.239 1.00 10.24 N
ATOM 21 C2 G A2838 -1.432 73.115 177.732 1.00 10.24 C
ATOM 22 N2 G A2838 -0.595 74.163 177.699 1.00 10.24 N
ATOM 23 N3 G A2838 -2.675 73.233 177.280 1.00 10.24 N
ATOM 24 C4 G A2838 -3.370 72.083 177.383 1.00 10.24 C
ATOM 25 P U A2839 -6.159 71.563 171.784 1.00 8.20 P
ATOM 26 OP1 U A2839 -6.836 72.007 170.563 1.00 8.20 O
ATOM 27 OP2 U A2839 -6.117 70.100 172.085 1.00 8.20 O
ATOM 28 O5' U A2839 -4.714 72.195 171.826 1.00 8.20 O
TER
ATOM 1 O3' C B2683 -0.211 79.033 179.480 1.00 0.58 O
ATOM 2 P G B2684 1.092 79.485 178.680 1.00 10.44 P
ATOM 3 OP1 G B2684 2.261 79.081 179.483 1.00 10.44 O
ATOM 4 OP2 G B2684 0.926 80.909 178.347 1.00 10.44 O
ATOM 5 O5' G B2684 0.996 78.604 177.362 1.00 10.44 O
ATOM 6 C5' G B2684 0.914 77.192 177.457 1.00 10.44 C
ATOM 7 C4' G B2684 0.844 76.528 176.105 1.00 10.44 C
ATOM 8 O4' G B2684 -0.501 76.619 175.573 1.00 10.44 O
ATOM 9 C3' G B2684 1.689 77.123 175.001 1.00 10.44 C
ATOM 10 O3' G B2684 3.064 76.816 175.105 1.00 10.44 O
ATOM 11 C2' G B2684 1.020 76.526 173.776 1.00 10.44 C
ATOM 12 O2' G B2684 1.312 75.149 173.659 1.00 10.44 O
ATOM 13 C1' G B2684 -0.443 76.658 174.166 1.00 10.44 C
ATOM 14 N9 G B2684 -1.014 77.929 173.685 1.00 10.75 N
ATOM 15 C8 G B2684 -1.119 79.164 174.267 1.00 10.75 C
ATOM 16 N7 G B2684 -1.656 80.036 173.455 1.00 10.75 N
ATOM 17 C5 G B2684 -1.905 79.345 172.272 1.00 10.75 C
ATOM 18 C6 G B2684 -2.479 79.723 171.011 1.00 10.75 C
ATOM 19 O6 G B2684 -2.925 80.824 170.638 1.00 10.75 O
ATOM 20 N1 G B2684 -2.511 78.654 170.107 1.00 10.75 N
ATOM 21 C2 G B2684 -2.060 77.392 170.369 1.00 10.75 C
ATOM 22 N2 G B2684 -2.156 76.492 169.401 1.00 10.75 N
ATOM 23 N3 G B2684 -1.540 77.036 171.511 1.00 10.75 N
ATOM 24 C4 G B2684 -1.494 78.047 172.408 1.00 10.75 C
ATOM 25 P G B2685 4.128 77.640 174.223 1.00 12.87 P
ATOM 26 OP1 G B2685 5.482 77.104 174.526 1.00 12.87 O
ATOM 27 OP2 G B2685 3.861 79.080 174.446 1.00 12.87 O
ATOM 28 O5' G B2685 3.722 77.252 172.743 1.00 12.87 O
TER
ATOM 2 P G A2838 -8.609 68.445 176.096 1.00 9.88 P
ATOM 3 OP1 G A2838 -9.624 68.328 175.041 1.00 9.88 O
ATOM 4 OP2 G A2838 -7.627 67.348 176.286 1.00 9.88 O
ATOM 5 O5' G A2838 -7.855 69.821 175.952 1.00 9.88 O
ATOM 6 C5' G A2838 -8.518 70.931 175.412 1.00 9.88 C
ATOM 7 C4' G A2838 -7.603 72.101 175.358 1.00 9.88 C
ATOM 8 O4' G A2838 -6.928 72.229 176.625 1.00 9.88 O
ATOM 9 C3' G A2838 -6.469 72.008 174.364 1.00 9.88 C
ATOM 10 O3' G A2838 -6.880 72.288 173.033 1.00 9.88 O
ATOM 11 C2' G A2838 -5.470 73.004 174.932 1.00 9.88 C
ATOM 12 O2' G A2838 -5.862 74.331 174.635 1.00 9.88 O
ATOM 13 C1' G A2838 -5.652 72.783 176.433 1.00 9.88 C
ATOM 14 N9 G A2838 -4.669 71.854 176.999 1.00 10.24 N
ATOM 15 C8 G A2838 -4.947 70.550 177.314 1.00 10.24 C
ATOM 16 N7 G A2838 -3.926 69.924 177.833 1.00 10.24 N
ATOM 17 C5 G A2838 -2.925 70.882 177.878 1.00 10.24 C
ATOM 18 C6 G A2838 -1.597 70.782 178.346 1.00 10.24 C
ATOM 19 O6 G A2838 -1.032 69.799 178.812 1.00 10.24 O
ATOM 20 N1 G A2838 -0.907 71.967 178.239 1.00 10.24 N
ATOM 21 C2 G A2838 -1.432 73.115 177.732 1.00 10.24 C
ATOM 22 N2 G A2838 -0.595 74.163 177.699 1.00 10.24 N
ATOM 23 N3 G A2838 -2.675 73.233 177.280 1.00 10.24 N
ATOM 24 C4 G A2838 -3.370 72.083 177.383 1.00 10.24 C
ATOM 25 P U A2839 -6.159 71.563 171.784 1.00 8.20 P
ATOM 26 OP1 U A2839 -6.836 72.007 170.563 1.00 8.20 O
ATOM 27 OP2 U A2839 -6.117 70.100 172.085 1.00 8.20 O
ATOM 28 O5' U A2839 -4.714 72.195 171.826 1.00 8.20 O
TER
ATOM 1 O3' C B2683 -0.211 79.033 179.480 1.00 0.58 O
ATOM 2 P G B2684 1.092 79.485 178.680 1.00 10.44 P
ATOM 3 OP1 G B2684 2.261 79.081 179.483 1.00 10.44 O
ATOM 4 OP2 G B2684 0.926 80.909 178.347 1.00 10.44 O
ATOM 5 O5' G B2684 0.996 78.604 177.362 1.00 10.44 O
ATOM 6 C5' G B2684 0.914 77.192 177.457 1.00 10.44 C
ATOM 7 C4' G B2684 0.844 76.528 176.105 1.00 10.44 C
ATOM 8 O4' G B2684 -0.501 76.619 175.573 1.00 10.44 O
ATOM 9 C3' G B2684 1.689 77.123 175.001 1.00 10.44 C
ATOM 10 O3' G B2684 3.064 76.816 175.105 1.00 10.44 O
ATOM 11 C2' G B2684 1.020 76.526 173.776 1.00 10.44 C
ATOM 12 O2' G B2684 1.312 75.149 173.659 1.00 10.44 O
ATOM 13 C1' G B2684 -0.443 76.658 174.166 1.00 10.44 C
ATOM 14 N9 G B2684 -1.014 77.929 173.685 1.00 10.75 N
ATOM 15 C8 G B2684 -1.119 79.164 174.267 1.00 10.75 C
ATOM 16 N7 G B2684 -1.656 80.036 173.455 1.00 10.75 N
ATOM 17 C5 G B2684 -1.905 79.345 172.272 1.00 10.75 C
ATOM 18 C6 G B2684 -2.479 79.723 171.011 1.00 10.75 C
ATOM 19 O6 G B2684 -2.925 80.824 170.638 1.00 10.75 O
ATOM 20 N1 G B2684 -2.511 78.654 170.107 1.00 10.75 N
ATOM 21 C2 G B2684 -2.060 77.392 170.369 1.00 10.75 C
ATOM 22 N2 G B2684 -2.156 76.492 169.401 1.00 10.75 N
ATOM 23 N3 G B2684 -1.540 77.036 171.511 1.00 10.75 N
ATOM 24 C4 G B2684 -1.494 78.047 172.408 1.00 10.75 C
ATOM 25 P G B2685 4.128 77.640 174.223 1.00 12.87 P
ATOM 26 OP1 G B2685 5.482 77.104 174.526 1.00 12.87 O
ATOM 27 OP2 G B2685 3.861 79.080 174.446 1.00 12.87 O
ATOM 28 O5' G B2685 3.722 77.252 172.743 1.00 12.87 O
TER
Atoms:
OP1: (-9.624,68.328,175.041)
OP2: (-7.627,67.348,176.286)
C3': (-6.469,72.008,174.364)
C1': (-5.652,72.783,176.433)
C5': (-8.518,70.931,175.412)
O6: (-1.032,69.799,178.812)
O4': (-6.928,72.229,176.625)
C8: (-4.947,70.550,177.314)
C2: (-1.432,73.115,177.732)
C6: (-1.597,70.782,178.346)
C5: (-2.925,70.882,177.878)
C4: (-3.370,72.083,177.383)
P: (-8.609,68.445,176.096)
C4': (-7.603,72.101,175.358)
C2': (-5.470,73.004,174.932)
O2': (-5.862,74.331,174.635)
N1: (-0.907,71.967,178.239)
N2: (-0.595,74.163,177.699)
N3: (-2.675,73.233,177.280)
N7: (-3.926,69.924,177.833)
N9: (-4.669,71.854,176.999)
O5': (-7.855,69.821,175.952)
O3': (-6.880,72.288,173.033)
OP2: (-7.627,67.348,176.286)
C3': (-6.469,72.008,174.364)
C1': (-5.652,72.783,176.433)
C5': (-8.518,70.931,175.412)
O6: (-1.032,69.799,178.812)
O4': (-6.928,72.229,176.625)
C8: (-4.947,70.550,177.314)
C2: (-1.432,73.115,177.732)
C6: (-1.597,70.782,178.346)
C5: (-2.925,70.882,177.878)
C4: (-3.370,72.083,177.383)
P: (-8.609,68.445,176.096)
C4': (-7.603,72.101,175.358)
C2': (-5.470,73.004,174.932)
O2': (-5.862,74.331,174.635)
N1: (-0.907,71.967,178.239)
N2: (-0.595,74.163,177.699)
N3: (-2.675,73.233,177.280)
N7: (-3.926,69.924,177.833)
N9: (-4.669,71.854,176.999)
O5': (-7.855,69.821,175.952)
O3': (-6.880,72.288,173.033)
OP1: (2.261,79.081,179.483)
OP2: (0.926,80.909,178.347)
C3': (1.689,77.123,175.001)
C1': (-0.443,76.658,174.166)
C5': (0.914,77.192,177.457)
O6: (-2.925,80.824,170.638)
O4': (-0.501,76.619,175.573)
C8: (-1.119,79.164,174.267)
C2: (-2.060,77.392,170.369)
C6: (-2.479,79.723,171.011)
C5: (-1.905,79.345,172.272)
C4: (-1.494,78.047,172.408)
P: (1.092,79.485,178.680)
C4': (0.844,76.528,176.105)
C2': (1.020,76.526,173.776)
O2': (1.312,75.149,173.659)
N1: (-2.511,78.654,170.107)
N2: (-2.156,76.492,169.401)
N3: (-1.540,77.036,171.511)
N7: (-1.656,80.036,173.455)
N9: (-1.014,77.929,173.685)
O5': (0.996,78.604,177.362)
O3': (3.064,76.816,175.105)
OP2: (0.926,80.909,178.347)
C3': (1.689,77.123,175.001)
C1': (-0.443,76.658,174.166)
C5': (0.914,77.192,177.457)
O6: (-2.925,80.824,170.638)
O4': (-0.501,76.619,175.573)
C8: (-1.119,79.164,174.267)
C2: (-2.060,77.392,170.369)
C6: (-2.479,79.723,171.011)
C5: (-1.905,79.345,172.272)
C4: (-1.494,78.047,172.408)
P: (1.092,79.485,178.680)
C4': (0.844,76.528,176.105)
C2': (1.020,76.526,173.776)
O2': (1.312,75.149,173.659)
N1: (-2.511,78.654,170.107)
N2: (-2.156,76.492,169.401)
N3: (-1.540,77.036,171.511)
N7: (-1.656,80.036,173.455)
N9: (-1.014,77.929,173.685)
O5': (0.996,78.604,177.362)
O3': (3.064,76.816,175.105)
Image (generated by PyMOL):