ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CCM:0516:0598

Extra

PDB:
ATOM 1 O3' U A 515 11.317 143.995 91.453 1.00 38.85 O
ATOM 2 P G A 516 11.298 143.485 92.981 1.00 38.11 P
ATOM 3 OP1 G A 516 9.942 143.758 93.519 1.00 39.56 O
ATOM 4 OP2 G A 516 12.486 144.017 93.693 1.00 39.14 O
ATOM 5 O5' G A 516 11.479 141.910 92.866 1.00 38.28 O
ATOM 6 C5' G A 516 10.450 141.085 92.307 1.00 36.59 C
ATOM 7 C4' G A 516 10.908 139.649 92.273 1.00 36.74 C
ATOM 8 O4' G A 516 12.035 139.519 91.365 1.00 37.28 O
ATOM 9 C3' G A 516 11.447 139.119 93.587 1.00 36.70 C
ATOM 10 O3' G A 516 10.405 138.716 94.464 1.00 36.42 O
ATOM 11 C2' G A 516 12.312 137.953 93.130 1.00 37.46 C
ATOM 12 O2' G A 516 11.546 136.807 92.826 1.00 37.40 O
ATOM 13 C1' G A 516 12.919 138.518 91.841 1.00 36.88 C
ATOM 14 N9 G A 516 14.237 139.115 92.032 1.00 37.01 N
ATOM 15 C8 G A 516 14.528 140.443 92.232 1.00 36.06 C
ATOM 16 N7 G A 516 15.803 140.668 92.390 1.00 36.56 N
ATOM 17 C5 G A 516 16.391 139.415 92.281 1.00 36.14 C
ATOM 18 C6 G A 516 17.755 139.028 92.366 1.00 36.75 C
ATOM 19 O6 G A 516 18.752 139.739 92.562 1.00 37.54 O
ATOM 20 N1 G A 516 17.906 137.656 92.198 1.00 35.48 N
ATOM 21 C2 G A 516 16.884 136.772 91.975 1.00 35.35 C
ATOM 22 N2 G A 516 17.234 135.483 91.838 1.00 34.34 N
ATOM 23 N3 G A 516 15.611 137.121 91.891 1.00 35.01 N
ATOM 24 C4 G A 516 15.439 138.448 92.055 1.00 35.87 C
ATOM 25 P G A 517 10.585 138.909 96.049 1.00 34.64 P
ATOM 26 OP1 G A 517 9.290 138.575 96.683 1.00 38.73 O
ATOM 27 OP2 G A 517 11.195 140.239 96.287 1.00 34.47 O
ATOM 28 O5' G A 517 11.623 137.775 96.461 1.00 35.49 O
TER

ATOM 1 O3' U B 597 14.612 127.348 85.481 1.00 32.03 O
ATOM 2 P G B 598 15.663 127.244 86.695 1.00 30.73 P
ATOM 3 OP1 G B 598 17.015 127.222 86.081 1.00 34.74 O
ATOM 4 OP2 G B 598 15.244 126.133 87.582 1.00 29.93 O
ATOM 5 O5' G B 598 15.489 128.621 87.481 1.00 29.27 O
ATOM 6 C5' G B 598 15.917 129.856 86.894 1.00 26.29 C
ATOM 7 C4' G B 598 15.753 130.990 87.875 1.00 27.79 C
ATOM 8 O4' G B 598 14.345 131.227 88.107 1.00 28.99 O
ATOM 9 C3' G B 598 16.299 130.760 89.271 1.00 28.92 C
ATOM 10 O3' G B 598 17.694 130.959 89.358 1.00 29.60 O
ATOM 11 C2' G B 598 15.537 131.790 90.083 1.00 30.36 C
ATOM 12 O2' G B 598 16.060 133.092 89.943 1.00 30.78 O
ATOM 13 C1' G B 598 14.156 131.709 89.431 1.00 30.68 C
ATOM 14 N9 G B 598 13.292 130.777 90.145 1.00 28.29 N
ATOM 15 C8 G B 598 13.035 129.465 89.826 1.00 29.08 C
ATOM 16 N7 G B 598 12.251 128.874 90.685 1.00 28.93 N
ATOM 17 C5 G B 598 11.965 129.859 91.619 1.00 30.31 C
ATOM 18 C6 G B 598 11.149 129.816 92.778 1.00 30.87 C
ATOM 19 O6 G B 598 10.505 128.860 93.231 1.00 31.84 O
ATOM 20 N1 G B 598 11.121 131.050 93.429 1.00 30.61 N
ATOM 21 C2 G B 598 11.791 132.178 93.016 1.00 28.71 C
ATOM 22 N2 G B 598 11.641 133.270 93.774 1.00 24.66 N
ATOM 23 N3 G B 598 12.553 132.228 91.936 1.00 29.52 N
ATOM 24 C4 G B 598 12.594 131.042 91.291 1.00 28.80 C
ATOM 25 P U B 599 18.543 130.088 90.400 1.00 29.16 P
ATOM 26 OP1 U B 599 19.970 130.308 90.077 1.00 33.91 O
ATOM 27 OP2 U B 599 18.000 128.712 90.382 1.00 31.25 O
ATOM 28 O5' U B 599 18.208 130.739 91.812 1.00 27.08 O
TER

Atoms:
OP1: (9.942,143.758,93.519)
OP2: (12.486,144.017,93.693)
C3': (11.447,139.119,93.587)
C1': (12.919,138.518,91.841)
C5': (10.450,141.085,92.307)
O6: (18.752,139.739,92.562)
O4': (12.035,139.519,91.365)
C8: (14.528,140.443,92.232)
C2: (16.884,136.772,91.975)
C6: (17.755,139.028,92.366)
C5: (16.391,139.415,92.281)
C4: (15.439,138.448,92.055)
P: (11.298,143.485,92.981)
C4': (10.908,139.649,92.273)
C2': (12.312,137.953,93.130)
O2': (11.546,136.807,92.826)
N1: (17.906,137.656,92.198)
N2: (17.234,135.483,91.838)
N3: (15.611,137.121,91.891)
N7: (15.803,140.668,92.390)
N9: (14.237,139.115,92.032)
O5': (11.479,141.910,92.866)
O3': (10.405,138.716,94.464)
OP1: (17.015,127.222,86.081)
OP2: (15.244,126.133,87.582)
C3': (16.299,130.760,89.271)
C1': (14.156,131.709,89.431)
C5': (15.917,129.856,86.894)
O6: (10.505,128.860,93.231)
O4': (14.345,131.227,88.107)
C8: (13.035,129.465,89.826)
C2: (11.791,132.178,93.016)
C6: (11.149,129.816,92.778)
C5: (11.965,129.859,91.619)
C4: (12.594,131.042,91.291)
P: (15.663,127.244,86.695)
C4': (15.753,130.990,87.875)
C2': (15.537,131.790,90.083)
O2': (16.060,133.092,89.943)
N1: (11.121,131.050,93.429)
N2: (11.641,133.270,93.774)
N3: (12.553,132.228,91.936)
N7: (12.251,128.874,90.685)
N9: (13.292,130.777,90.145)
O5': (15.489,128.621,87.481)
O3': (17.694,130.959,89.358)
Image (generated by PyMOL):
PyMOL image
show in jmol