ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1XMQ:A853:A553

Extra

PDB:
ATOM 1 O3' C A 852 149.439 98.172 -35.153 1.00 30.34 O
ATOM 2 P G A 853 149.955 97.409 -33.838 1.00 34.87 P
ATOM 3 OP1 G A 853 149.641 95.954 -34.015 1.00 34.64 O
ATOM 4 OP2 G A 853 149.486 98.123 -32.622 1.00 34.64 O
ATOM 5 O5' G A 853 151.529 97.622 -33.835 1.00 34.87 O
ATOM 6 C5' G A 853 152.316 97.470 -35.015 1.00 34.87 C
ATOM 7 C4' G A 853 153.667 98.099 -34.806 1.00 34.87 C
ATOM 8 O4' G A 853 153.561 99.542 -34.875 1.00 34.87 O
ATOM 9 C3' G A 853 154.331 97.860 -33.458 1.00 34.87 C
ATOM 10 O3' G A 853 154.949 96.586 -33.357 1.00 34.87 O
ATOM 11 C2' G A 853 155.335 98.994 -33.411 1.00 34.87 C
ATOM 12 O2' G A 853 156.432 98.751 -34.265 1.00 34.87 O
ATOM 13 C1' G A 853 154.533 100.133 -34.027 1.00 34.87 C
ATOM 14 N9 G A 853 153.871 100.904 -32.975 1.00 34.64 N
ATOM 15 C8 G A 853 152.541 100.896 -32.636 1.00 34.64 C
ATOM 16 N7 G A 853 152.269 101.655 -31.610 1.00 34.64 N
ATOM 17 C5 G A 853 153.485 102.212 -31.260 1.00 34.64 C
ATOM 18 C6 G A 853 153.810 103.106 -30.224 1.00 34.64 C
ATOM 19 O6 G A 853 153.068 103.619 -29.399 1.00 34.64 O
ATOM 20 N1 G A 853 155.165 103.393 -30.202 1.00 34.64 N
ATOM 21 C2 G A 853 156.092 102.889 -31.075 1.00 34.64 C
ATOM 22 N2 G A 853 157.345 103.283 -30.885 1.00 34.64 N
ATOM 23 N3 G A 853 155.803 102.061 -32.058 1.00 34.64 N
ATOM 24 C4 G A 853 154.485 101.765 -32.092 1.00 34.64 C
ATOM 25 P C A 854 154.812 95.735 -31.990 1.00 38.12 P
ATOM 26 OP1 C A 854 155.312 94.361 -32.330 1.00 43.76 O
ATOM 27 OP2 C A 854 153.451 95.891 -31.392 1.00 43.76 O
ATOM 28 O5' C A 854 155.842 96.451 -31.006 1.00 38.12 O
TER

ATOM 1 O3' A B 552 162.276 101.253 -29.577 1.00 41.00 O
ATOM 2 P G B 553 162.980 101.830 -30.888 1.00 43.80 P
ATOM 3 OP1 G B 553 162.463 100.988 -32.026 1.00 36.08 O
ATOM 4 OP2 G B 553 164.436 101.925 -30.655 1.00 36.08 O
ATOM 5 O5' G B 553 162.410 103.315 -30.989 1.00 43.80 O
ATOM 6 C5' G B 553 161.046 103.548 -31.362 1.00 43.80 C
ATOM 7 C4' G B 553 160.891 103.345 -32.844 1.00 43.80 C
ATOM 8 O4' G B 553 159.501 103.404 -33.213 1.00 43.80 O
ATOM 9 C3' G B 553 161.591 104.363 -33.699 1.00 43.80 C
ATOM 10 O3' G B 553 162.658 103.856 -34.539 1.00 43.80 O
ATOM 11 C2' G B 553 160.519 105.373 -34.099 1.00 43.80 C
ATOM 12 O2' G B 553 160.704 105.880 -35.400 1.00 43.80 O
ATOM 13 C1' G B 553 159.228 104.562 -33.973 1.00 43.80 C
ATOM 14 N9 G B 553 158.088 105.196 -33.309 1.00 36.08 N
ATOM 15 C8 G B 553 158.103 106.013 -32.211 1.00 36.08 C
ATOM 16 N7 G B 553 156.909 106.300 -31.767 1.00 36.08 N
ATOM 17 C5 G B 553 156.054 105.665 -32.651 1.00 36.08 C
ATOM 18 C6 G B 553 154.629 105.606 -32.681 1.00 36.08 C
ATOM 19 O6 G B 553 153.812 106.156 -31.925 1.00 36.08 O
ATOM 20 N1 G B 553 154.175 104.815 -33.729 1.00 36.08 N
ATOM 21 C2 G B 553 154.980 104.178 -34.641 1.00 36.08 C
ATOM 22 N2 G B 553 154.365 103.437 -35.562 1.00 36.08 N
ATOM 23 N3 G B 553 156.296 104.253 -34.644 1.00 36.08 N
ATOM 24 C4 G B 553 156.764 104.999 -33.621 1.00 36.08 C
ATOM 25 P G B 554 162.408 102.826 -35.766 1.00 35.40 P
ATOM 26 OP1 G B 554 163.530 101.879 -35.619 1.00 40.12 O
ATOM 27 OP2 G B 554 162.229 103.565 -37.064 1.00 40.12 O
ATOM 28 O5' G B 554 161.100 101.974 -35.465 1.00 35.40 O
TER

Atoms:
OP1: (149.641,95.954,-34.015)
OP2: (149.486,98.123,-32.622)
C3': (154.331,97.860,-33.458)
C1': (154.533,100.133,-34.027)
C5': (152.316,97.470,-35.015)
O6: (153.068,103.619,-29.399)
O4': (153.561,99.542,-34.875)
C8: (152.541,100.896,-32.636)
C2: (156.092,102.889,-31.075)
C6: (153.810,103.106,-30.224)
C5: (153.485,102.212,-31.260)
C4: (154.485,101.765,-32.092)
P: (149.955,97.409,-33.838)
C4': (153.667,98.099,-34.806)
C2': (155.335,98.994,-33.411)
O2': (156.432,98.751,-34.265)
N1: (155.165,103.393,-30.202)
N2: (157.345,103.283,-30.885)
N3: (155.803,102.061,-32.058)
N7: (152.269,101.655,-31.610)
N9: (153.871,100.904,-32.975)
O5': (151.529,97.622,-33.835)
O3': (154.949,96.586,-33.357)
OP1: (162.463,100.988,-32.026)
OP2: (164.436,101.925,-30.655)
C3': (161.591,104.363,-33.699)
C1': (159.228,104.562,-33.973)
C5': (161.046,103.548,-31.362)
O6: (153.812,106.156,-31.925)
O4': (159.501,103.404,-33.213)
C8: (158.103,106.013,-32.211)
C2: (154.980,104.178,-34.641)
C6: (154.629,105.606,-32.681)
C5: (156.054,105.665,-32.651)
C4: (156.764,104.999,-33.621)
P: (162.980,101.830,-30.888)
C4': (160.891,103.345,-32.844)
C2': (160.519,105.373,-34.099)
O2': (160.704,105.880,-35.400)
N1: (154.175,104.815,-33.729)
N2: (154.365,103.437,-35.562)
N3: (156.296,104.253,-34.644)
N7: (156.909,106.300,-31.767)
N9: (158.088,105.196,-33.309)
O5': (162.410,103.315,-30.989)
O3': (162.658,103.856,-34.539)
Image (generated by PyMOL):
PyMOL image
show in jmol