ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQK:023:0444

Extra

PDB:
ATOM 1 O3' G A 22 43.463 136.408 46.094 1.00 34.90 O
ATOM 2 P G A 23 44.376 135.227 45.521 1.00 36.12 P
ATOM 3 OP1 G A 23 45.722 135.781 45.237 1.00 36.07 O
ATOM 4 OP2 G A 23 43.637 134.534 44.446 1.00 36.04 O
ATOM 5 O5' G A 23 44.529 134.253 46.773 1.00 38.76 O
ATOM 6 C5' G A 23 44.849 132.856 46.604 1.00 34.53 C
ATOM 7 C4' G A 23 44.512 132.094 47.869 1.00 34.26 C
ATOM 8 O4' G A 23 43.095 132.230 48.180 1.00 35.17 O
ATOM 9 C3' G A 23 44.745 130.602 47.779 1.00 32.03 C
ATOM 10 O3' G A 23 46.111 130.305 48.043 1.00 31.93 O
ATOM 11 C2' G A 23 43.797 130.064 48.841 1.00 33.86 C
ATOM 12 O2' G A 23 44.297 130.218 50.152 1.00 34.32 O
ATOM 13 C1' G A 23 42.593 130.998 48.679 1.00 35.03 C
ATOM 14 N9 G A 23 41.574 130.506 47.747 1.00 37.00 N
ATOM 15 C8 G A 23 41.096 131.164 46.641 1.00 37.50 C
ATOM 16 N7 G A 23 40.200 130.483 45.984 1.00 36.96 N
ATOM 17 C5 G A 23 40.070 129.302 46.693 1.00 35.19 C
ATOM 18 C6 G A 23 39.246 128.172 46.448 1.00 35.68 C
ATOM 19 O6 G A 23 38.458 127.982 45.519 1.00 34.78 O
ATOM 20 N1 G A 23 39.415 127.195 47.423 1.00 36.79 N
ATOM 21 C2 G A 23 40.273 127.287 48.489 1.00 35.74 C
ATOM 22 N2 G A 23 40.283 126.237 49.322 1.00 33.08 N
ATOM 23 N3 G A 23 41.059 128.332 48.721 1.00 33.70 N
ATOM 24 C4 G A 23 40.905 129.296 47.792 1.00 35.45 C
ATOM 25 P C A 24 46.924 129.359 47.041 1.00 33.98 P
ATOM 26 OP1 C A 24 48.330 129.295 47.462 1.00 31.88 O
ATOM 27 OP2 C A 24 46.587 129.778 45.642 1.00 37.34 O
ATOM 28 O5' C A 24 46.299 127.915 47.273 1.00 36.74 O
TER

ATOM 1 O3' A B 443 41.612 126.305 58.191 1.00 31.92 O
ATOM 2 P G B 444 43.033 126.071 57.493 1.00 33.32 P
ATOM 3 OP1 G B 444 43.288 124.613 57.429 1.00 32.58 O
ATOM 4 OP2 G B 444 44.034 126.947 58.162 1.00 37.12 O
ATOM 5 O5' G B 444 42.801 126.614 56.011 1.00 33.52 O
ATOM 6 C5' G B 444 42.060 125.848 55.039 1.00 30.08 C
ATOM 7 C4' G B 444 41.873 126.652 53.776 1.00 28.94 C
ATOM 8 O4' G B 444 41.090 127.847 54.052 1.00 33.15 O
ATOM 9 C3' G B 444 43.140 127.207 53.158 1.00 27.48 C
ATOM 10 O3' G B 444 43.827 126.224 52.414 1.00 28.20 O
ATOM 11 C2' G B 444 42.592 128.319 52.281 1.00 29.69 C
ATOM 12 O2' G B 444 41.972 127.839 51.111 1.00 29.01 O
ATOM 13 C1' G B 444 41.513 128.903 53.190 1.00 31.90 C
ATOM 14 N9 G B 444 42.069 129.979 54.004 1.00 32.97 N
ATOM 15 C8 G B 444 42.518 129.883 55.299 1.00 34.26 C
ATOM 16 N7 G B 444 43.008 131.001 55.758 1.00 34.92 N
ATOM 17 C5 G B 444 42.869 131.895 54.706 1.00 36.35 C
ATOM 18 C6 G B 444 43.248 133.262 54.608 1.00 36.06 C
ATOM 19 O6 G B 444 43.804 133.972 55.451 1.00 36.53 O
ATOM 20 N1 G B 444 42.925 133.790 53.367 1.00 37.32 N
ATOM 21 C2 G B 444 42.326 133.098 52.342 1.00 36.01 C
ATOM 22 N2 G B 444 42.101 133.803 51.221 1.00 29.29 N
ATOM 23 N3 G B 444 41.977 131.817 52.415 1.00 34.22 N
ATOM 24 C4 G B 444 42.277 131.283 53.618 1.00 34.26 C
ATOM 25 P U B 445 45.407 126.045 52.608 1.00 26.81 P
ATOM 26 OP1 U B 445 45.821 124.891 51.787 1.00 25.91 O
ATOM 27 OP2 U B 445 45.694 126.037 54.062 1.00 26.43 O
ATOM 28 O5' U B 445 46.025 127.393 52.005 1.00 28.77 O
TER

Atoms:
OP1: (45.722,135.781,45.237)
OP2: (43.637,134.534,44.446)
C3': (44.745,130.602,47.779)
C1': (42.593,130.998,48.679)
C5': (44.849,132.856,46.604)
O6: (38.458,127.982,45.519)
O4': (43.095,132.230,48.180)
C8: (41.096,131.164,46.641)
C2: (40.273,127.287,48.489)
C6: (39.246,128.172,46.448)
C5: (40.070,129.302,46.693)
C4: (40.905,129.296,47.792)
P: (44.376,135.227,45.521)
C4': (44.512,132.094,47.869)
C2': (43.797,130.064,48.841)
O2': (44.297,130.218,50.152)
N1: (39.415,127.195,47.423)
N2: (40.283,126.237,49.322)
N3: (41.059,128.332,48.721)
N7: (40.200,130.483,45.984)
N9: (41.574,130.506,47.747)
O5': (44.529,134.253,46.773)
O3': (46.111,130.305,48.043)
OP1: (43.288,124.613,57.429)
OP2: (44.034,126.947,58.162)
C3': (43.140,127.207,53.158)
C1': (41.513,128.903,53.190)
C5': (42.060,125.848,55.039)
O6: (43.804,133.972,55.451)
O4': (41.090,127.847,54.052)
C8: (42.518,129.883,55.299)
C2: (42.326,133.098,52.342)
C6: (43.248,133.262,54.608)
C5: (42.869,131.895,54.706)
C4: (42.277,131.283,53.618)
P: (43.033,126.071,57.493)
C4': (41.873,126.652,53.776)
C2': (42.592,128.319,52.281)
O2': (41.972,127.839,51.111)
N1: (42.925,133.790,53.367)
N2: (42.101,133.803,51.221)
N3: (41.977,131.817,52.415)
N7: (43.008,131.001,55.758)
N9: (42.069,129.979,54.004)
O5': (42.801,126.614,56.011)
O3': (43.827,126.224,52.414)
Image (generated by PyMOL):
PyMOL image
show in jmol