Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11138:11263
Extra
PDB:
ATOM 1 O3' A A1137 34.869 7.819 16.961 1.00 48.83 O
ATOM 2 P G A1138 35.412 6.991 18.198 1.00 45.30 P
ATOM 3 OP1 G A1138 34.431 5.919 18.479 1.00 45.21 O
ATOM 4 OP2 G A1138 35.732 7.969 19.258 1.00 45.05 O
ATOM 5 O5' G A1138 36.738 6.346 17.644 1.00 45.32 O
ATOM 6 C5' G A1138 36.704 5.365 16.629 1.00 45.56 C
ATOM 7 C4' G A1138 38.095 5.048 16.176 1.00 45.59 C
ATOM 8 O4' G A1138 38.682 6.212 15.541 1.00 45.84 O
ATOM 9 C3' G A1138 39.051 4.710 17.284 1.00 45.17 C
ATOM 10 O3' G A1138 38.957 3.373 17.652 1.00 44.97 O
ATOM 11 C2' G A1138 40.398 5.078 16.714 1.00 45.29 C
ATOM 12 O2' G A1138 40.855 4.061 15.850 1.00 45.47 O
ATOM 13 C1' G A1138 40.049 6.292 15.865 1.00 45.66 C
ATOM 14 N9 G A1138 40.288 7.571 16.562 1.00 45.54 N
ATOM 15 C8 G A1138 39.468 8.150 17.492 1.00 45.35 C
ATOM 16 N7 G A1138 39.925 9.286 17.917 1.00 45.31 N
ATOM 17 C5 G A1138 41.097 9.473 17.215 1.00 45.48 C
ATOM 18 C6 G A1138 41.990 10.545 17.264 1.00 45.53 C
ATOM 19 O6 G A1138 41.892 11.554 17.968 1.00 45.43 O
ATOM 20 N1 G A1138 43.083 10.347 16.417 1.00 45.71 N
ATOM 21 C2 G A1138 43.242 9.248 15.611 1.00 45.85 C
ATOM 22 N2 G A1138 44.317 9.234 14.824 1.00 46.05 N
ATOM 23 N3 G A1138 42.389 8.263 15.549 1.00 45.81 N
ATOM 24 C4 G A1138 41.349 8.438 16.375 1.00 45.62 C
ATOM 25 P A A1139 39.210 2.969 19.162 1.00 40.77 P
ATOM 26 OP1 A A1139 38.696 1.597 19.341 1.00 40.67 O
ATOM 27 OP2 A A1139 38.641 4.071 19.992 1.00 40.63 O
ATOM 28 O5' A A1139 40.798 2.958 19.231 1.00 40.67 O
TER
ATOM 1 O3' A B1262 49.748 7.422 14.326 1.00 38.53 O
ATOM 2 P G B1263 49.299 5.874 14.229 1.00 41.84 P
ATOM 3 OP1 G B1263 49.547 5.252 15.542 1.00 41.39 O
ATOM 4 OP2 G B1263 49.950 5.301 13.036 1.00 42.17 O
ATOM 5 O5' G B1263 47.749 5.993 13.969 1.00 41.96 O
ATOM 6 C5' G B1263 46.835 6.310 15.015 1.00 41.67 C
ATOM 7 C4' G B1263 45.417 5.974 14.609 1.00 41.81 C
ATOM 8 O4' G B1263 45.015 6.828 13.499 1.00 42.24 O
ATOM 9 C3' G B1263 45.202 4.567 14.089 1.00 41.88 C
ATOM 10 O3' G B1263 45.007 3.638 15.114 1.00 41.51 O
ATOM 11 C2' G B1263 44.005 4.711 13.161 1.00 42.23 C
ATOM 12 O2' G B1263 42.766 4.718 13.886 1.00 42.05 O
ATOM 13 C1' G B1263 44.239 6.103 12.582 1.00 42.51 C
ATOM 14 N9 G B1263 44.955 6.052 11.298 1.00 42.91 N
ATOM 15 C8 G B1263 46.236 6.464 11.030 1.00 42.99 C
ATOM 16 N7 G B1263 46.554 6.260 9.782 1.00 43.39 N
ATOM 17 C5 G B1263 45.412 5.707 9.200 1.00 43.59 C
ATOM 18 C6 G B1263 45.152 5.295 7.862 1.00 44.04 C
ATOM 19 O6 G B1263 45.902 5.308 6.908 1.00 44.36 O
ATOM 20 N1 G B1263 43.869 4.790 7.670 1.00 44.12 N
ATOM 21 C2 G B1263 42.952 4.683 8.691 1.00 43.79 C
ATOM 22 N2 G B1263 41.804 4.135 8.301 1.00 43.95 N
ATOM 23 N3 G B1263 43.154 5.069 9.959 1.00 43.37 N
ATOM 24 C4 G B1263 44.403 5.576 10.128 1.00 43.29 C
ATOM 25 P C B1264 45.575 2.146 14.970 1.00 39.68 P
ATOM 26 OP1 C B1264 45.496 1.552 16.286 1.00 39.25 O
ATOM 27 OP2 C B1264 46.862 2.213 14.305 1.00 39.86 O
ATOM 28 O5' C B1264 44.562 1.450 13.995 1.00 39.99 O
TER
ATOM 2 P G A1138 35.412 6.991 18.198 1.00 45.30 P
ATOM 3 OP1 G A1138 34.431 5.919 18.479 1.00 45.21 O
ATOM 4 OP2 G A1138 35.732 7.969 19.258 1.00 45.05 O
ATOM 5 O5' G A1138 36.738 6.346 17.644 1.00 45.32 O
ATOM 6 C5' G A1138 36.704 5.365 16.629 1.00 45.56 C
ATOM 7 C4' G A1138 38.095 5.048 16.176 1.00 45.59 C
ATOM 8 O4' G A1138 38.682 6.212 15.541 1.00 45.84 O
ATOM 9 C3' G A1138 39.051 4.710 17.284 1.00 45.17 C
ATOM 10 O3' G A1138 38.957 3.373 17.652 1.00 44.97 O
ATOM 11 C2' G A1138 40.398 5.078 16.714 1.00 45.29 C
ATOM 12 O2' G A1138 40.855 4.061 15.850 1.00 45.47 O
ATOM 13 C1' G A1138 40.049 6.292 15.865 1.00 45.66 C
ATOM 14 N9 G A1138 40.288 7.571 16.562 1.00 45.54 N
ATOM 15 C8 G A1138 39.468 8.150 17.492 1.00 45.35 C
ATOM 16 N7 G A1138 39.925 9.286 17.917 1.00 45.31 N
ATOM 17 C5 G A1138 41.097 9.473 17.215 1.00 45.48 C
ATOM 18 C6 G A1138 41.990 10.545 17.264 1.00 45.53 C
ATOM 19 O6 G A1138 41.892 11.554 17.968 1.00 45.43 O
ATOM 20 N1 G A1138 43.083 10.347 16.417 1.00 45.71 N
ATOM 21 C2 G A1138 43.242 9.248 15.611 1.00 45.85 C
ATOM 22 N2 G A1138 44.317 9.234 14.824 1.00 46.05 N
ATOM 23 N3 G A1138 42.389 8.263 15.549 1.00 45.81 N
ATOM 24 C4 G A1138 41.349 8.438 16.375 1.00 45.62 C
ATOM 25 P A A1139 39.210 2.969 19.162 1.00 40.77 P
ATOM 26 OP1 A A1139 38.696 1.597 19.341 1.00 40.67 O
ATOM 27 OP2 A A1139 38.641 4.071 19.992 1.00 40.63 O
ATOM 28 O5' A A1139 40.798 2.958 19.231 1.00 40.67 O
TER
ATOM 1 O3' A B1262 49.748 7.422 14.326 1.00 38.53 O
ATOM 2 P G B1263 49.299 5.874 14.229 1.00 41.84 P
ATOM 3 OP1 G B1263 49.547 5.252 15.542 1.00 41.39 O
ATOM 4 OP2 G B1263 49.950 5.301 13.036 1.00 42.17 O
ATOM 5 O5' G B1263 47.749 5.993 13.969 1.00 41.96 O
ATOM 6 C5' G B1263 46.835 6.310 15.015 1.00 41.67 C
ATOM 7 C4' G B1263 45.417 5.974 14.609 1.00 41.81 C
ATOM 8 O4' G B1263 45.015 6.828 13.499 1.00 42.24 O
ATOM 9 C3' G B1263 45.202 4.567 14.089 1.00 41.88 C
ATOM 10 O3' G B1263 45.007 3.638 15.114 1.00 41.51 O
ATOM 11 C2' G B1263 44.005 4.711 13.161 1.00 42.23 C
ATOM 12 O2' G B1263 42.766 4.718 13.886 1.00 42.05 O
ATOM 13 C1' G B1263 44.239 6.103 12.582 1.00 42.51 C
ATOM 14 N9 G B1263 44.955 6.052 11.298 1.00 42.91 N
ATOM 15 C8 G B1263 46.236 6.464 11.030 1.00 42.99 C
ATOM 16 N7 G B1263 46.554 6.260 9.782 1.00 43.39 N
ATOM 17 C5 G B1263 45.412 5.707 9.200 1.00 43.59 C
ATOM 18 C6 G B1263 45.152 5.295 7.862 1.00 44.04 C
ATOM 19 O6 G B1263 45.902 5.308 6.908 1.00 44.36 O
ATOM 20 N1 G B1263 43.869 4.790 7.670 1.00 44.12 N
ATOM 21 C2 G B1263 42.952 4.683 8.691 1.00 43.79 C
ATOM 22 N2 G B1263 41.804 4.135 8.301 1.00 43.95 N
ATOM 23 N3 G B1263 43.154 5.069 9.959 1.00 43.37 N
ATOM 24 C4 G B1263 44.403 5.576 10.128 1.00 43.29 C
ATOM 25 P C B1264 45.575 2.146 14.970 1.00 39.68 P
ATOM 26 OP1 C B1264 45.496 1.552 16.286 1.00 39.25 O
ATOM 27 OP2 C B1264 46.862 2.213 14.305 1.00 39.86 O
ATOM 28 O5' C B1264 44.562 1.450 13.995 1.00 39.99 O
TER
Atoms:
OP1: (34.431,5.919,18.479)
OP2: (35.732,7.969,19.258)
C3': (39.051,4.710,17.284)
C1': (40.049,6.292,15.865)
C5': (36.704,5.365,16.629)
O6: (41.892,11.554,17.968)
O4': (38.682,6.212,15.541)
C8: (39.468,8.150,17.492)
C2: (43.242,9.248,15.611)
C6: (41.990,10.545,17.264)
C5: (41.097,9.473,17.215)
C4: (41.349,8.438,16.375)
P: (35.412,6.991,18.198)
C4': (38.095,5.048,16.176)
C2': (40.398,5.078,16.714)
O2': (40.855,4.061,15.850)
N1: (43.083,10.347,16.417)
N2: (44.317,9.234,14.824)
N3: (42.389,8.263,15.549)
N7: (39.925,9.286,17.917)
N9: (40.288,7.571,16.562)
O5': (36.738,6.346,17.644)
O3': (38.957,3.373,17.652)
OP2: (35.732,7.969,19.258)
C3': (39.051,4.710,17.284)
C1': (40.049,6.292,15.865)
C5': (36.704,5.365,16.629)
O6: (41.892,11.554,17.968)
O4': (38.682,6.212,15.541)
C8: (39.468,8.150,17.492)
C2: (43.242,9.248,15.611)
C6: (41.990,10.545,17.264)
C5: (41.097,9.473,17.215)
C4: (41.349,8.438,16.375)
P: (35.412,6.991,18.198)
C4': (38.095,5.048,16.176)
C2': (40.398,5.078,16.714)
O2': (40.855,4.061,15.850)
N1: (43.083,10.347,16.417)
N2: (44.317,9.234,14.824)
N3: (42.389,8.263,15.549)
N7: (39.925,9.286,17.917)
N9: (40.288,7.571,16.562)
O5': (36.738,6.346,17.644)
O3': (38.957,3.373,17.652)
OP1: (49.547,5.252,15.542)
OP2: (49.950,5.301,13.036)
C3': (45.202,4.567,14.089)
C1': (44.239,6.103,12.582)
C5': (46.835,6.310,15.015)
O6: (45.902,5.308,6.908)
O4': (45.015,6.828,13.499)
C8: (46.236,6.464,11.030)
C2: (42.952,4.683,8.691)
C6: (45.152,5.295,7.862)
C5: (45.412,5.707,9.200)
C4: (44.403,5.576,10.128)
P: (49.299,5.874,14.229)
C4': (45.417,5.974,14.609)
C2': (44.005,4.711,13.161)
O2': (42.766,4.718,13.886)
N1: (43.869,4.790,7.670)
N2: (41.804,4.135,8.301)
N3: (43.154,5.069,9.959)
N7: (46.554,6.260,9.782)
N9: (44.955,6.052,11.298)
O5': (47.749,5.993,13.969)
O3': (45.007,3.638,15.114)
OP2: (49.950,5.301,13.036)
C3': (45.202,4.567,14.089)
C1': (44.239,6.103,12.582)
C5': (46.835,6.310,15.015)
O6: (45.902,5.308,6.908)
O4': (45.015,6.828,13.499)
C8: (46.236,6.464,11.030)
C2: (42.952,4.683,8.691)
C6: (45.152,5.295,7.862)
C5: (45.412,5.707,9.200)
C4: (44.403,5.576,10.128)
P: (49.299,5.874,14.229)
C4': (45.417,5.974,14.609)
C2': (44.005,4.711,13.161)
O2': (42.766,4.718,13.886)
N1: (43.869,4.790,7.670)
N2: (41.804,4.135,8.301)
N3: (43.154,5.069,9.959)
N7: (46.554,6.260,9.782)
N9: (44.955,6.052,11.298)
O5': (47.749,5.993,13.969)
O3': (45.007,3.638,15.114)
Image (generated by PyMOL):