Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M5K:B19:B62
Extra
PDB:
ATOM 1 O3' G A 18 91.617 3.337 32.109 1.00109.02 O
ATOM 2 P A A 19 90.535 3.565 33.272 1.00102.95 P
ATOM 3 OP1 A A 19 89.520 2.488 33.178 1.00 97.94 O
ATOM 4 OP2 A A 19 90.107 4.985 33.208 1.00 94.72 O
ATOM 5 O5' A A 19 91.376 3.366 34.608 1.00 95.09 O
ATOM 6 C5' A A 19 90.936 3.939 35.828 1.00 98.46 C
ATOM 7 C4' A A 19 92.109 4.203 36.737 1.00 91.66 C
ATOM 8 O4' A A 19 93.102 4.992 36.037 1.00 93.19 O
ATOM 9 C3' A A 19 91.753 5.046 37.946 1.00103.26 C
ATOM 10 O3' A A 19 91.208 4.239 38.975 1.00114.02 O
ATOM 11 C2' A A 19 93.084 5.685 38.318 1.00 95.67 C
ATOM 12 O2' A A 19 93.918 4.860 39.106 1.00 89.11 O
ATOM 13 C1' A A 19 93.701 5.913 36.938 1.00 91.36 C
ATOM 14 N9 A A 19 93.489 7.265 36.421 1.00 85.68 N
ATOM 15 C8 A A 19 92.885 7.636 35.244 1.00 83.79 C
ATOM 16 N7 A A 19 92.868 8.932 35.044 1.00 78.95 N
ATOM 17 C5 A A 19 93.497 9.450 36.167 1.00 82.47 C
ATOM 18 C6 A A 19 93.800 10.765 36.559 1.00 87.93 C
ATOM 19 N6 A A 19 93.498 11.845 35.830 1.00 90.83 N
ATOM 20 N1 A A 19 94.435 10.938 37.741 1.00 89.23 N
ATOM 21 C2 A A 19 94.742 9.856 38.468 1.00 87.02 C
ATOM 22 N3 A A 19 94.513 8.572 38.205 1.00 85.79 N
ATOM 23 C4 A A 19 93.880 8.435 37.027 1.00 83.34 C
ATOM 24 P G A 20 89.759 4.591 39.557 1.00117.42 P
ATOM 25 OP1 G A 20 89.415 3.601 40.608 1.00121.56 O
ATOM 26 OP2 G A 20 88.856 4.768 38.389 1.00101.78 O
ATOM 27 O5' G A 20 89.986 6.004 40.249 1.00 98.55 O
TER
ATOM 1 O3' A B 61 98.355 18.514 41.373 1.00118.98 O
ATOM 2 P C B 62 99.596 17.610 40.898 1.00120.64 P
ATOM 3 OP1 C B 62 100.840 18.358 41.207 1.00127.07 O
ATOM 4 OP2 C B 62 99.326 17.180 39.502 1.00121.08 O
ATOM 5 O5' C B 62 99.530 16.318 41.830 1.00117.72 O
ATOM 6 C5' C B 62 100.112 16.315 43.132 1.00115.03 C
ATOM 7 C4' C B 62 99.840 14.999 43.824 1.00117.45 C
ATOM 8 O4' C B 62 98.403 14.842 43.998 1.00111.50 O
ATOM 9 C3' C B 62 100.252 13.748 43.061 1.00119.67 C
ATOM 10 O3' C B 62 101.629 13.429 43.229 1.00126.12 O
ATOM 11 C2' C B 62 99.347 12.696 43.685 1.00114.70 C
ATOM 12 O2' C B 62 99.791 12.273 44.960 1.00117.98 O
ATOM 13 C1' C B 62 98.042 13.481 43.813 1.00106.50 C
ATOM 14 N1 C B 62 97.258 13.380 42.575 1.00 99.92 N
ATOM 15 C2 C B 62 96.515 12.222 42.345 1.00101.58 C
ATOM 16 O2 C B 62 96.511 11.331 43.208 1.00105.78 O
ATOM 17 N3 C B 62 95.822 12.101 41.189 1.00 98.87 N
ATOM 18 C4 C B 62 95.850 13.087 40.289 1.00 96.31 C
ATOM 19 N4 C B 62 95.156 12.924 39.161 1.00 95.54 N
ATOM 20 C5 C B 62 96.590 14.283 40.506 1.00 93.96 C
ATOM 21 C6 C B 62 97.268 14.389 41.653 1.00 96.80 C
ATOM 22 P C B 63 102.406 12.630 42.067 1.00125.99 P
ATOM 23 OP1 C B 63 103.761 12.284 42.562 1.00134.80 O
ATOM 24 OP2 C B 63 102.260 13.399 40.804 1.00126.90 O
ATOM 25 O5' C B 63 101.581 11.278 41.904 1.00122.27 O
TER
ATOM 2 P A A 19 90.535 3.565 33.272 1.00102.95 P
ATOM 3 OP1 A A 19 89.520 2.488 33.178 1.00 97.94 O
ATOM 4 OP2 A A 19 90.107 4.985 33.208 1.00 94.72 O
ATOM 5 O5' A A 19 91.376 3.366 34.608 1.00 95.09 O
ATOM 6 C5' A A 19 90.936 3.939 35.828 1.00 98.46 C
ATOM 7 C4' A A 19 92.109 4.203 36.737 1.00 91.66 C
ATOM 8 O4' A A 19 93.102 4.992 36.037 1.00 93.19 O
ATOM 9 C3' A A 19 91.753 5.046 37.946 1.00103.26 C
ATOM 10 O3' A A 19 91.208 4.239 38.975 1.00114.02 O
ATOM 11 C2' A A 19 93.084 5.685 38.318 1.00 95.67 C
ATOM 12 O2' A A 19 93.918 4.860 39.106 1.00 89.11 O
ATOM 13 C1' A A 19 93.701 5.913 36.938 1.00 91.36 C
ATOM 14 N9 A A 19 93.489 7.265 36.421 1.00 85.68 N
ATOM 15 C8 A A 19 92.885 7.636 35.244 1.00 83.79 C
ATOM 16 N7 A A 19 92.868 8.932 35.044 1.00 78.95 N
ATOM 17 C5 A A 19 93.497 9.450 36.167 1.00 82.47 C
ATOM 18 C6 A A 19 93.800 10.765 36.559 1.00 87.93 C
ATOM 19 N6 A A 19 93.498 11.845 35.830 1.00 90.83 N
ATOM 20 N1 A A 19 94.435 10.938 37.741 1.00 89.23 N
ATOM 21 C2 A A 19 94.742 9.856 38.468 1.00 87.02 C
ATOM 22 N3 A A 19 94.513 8.572 38.205 1.00 85.79 N
ATOM 23 C4 A A 19 93.880 8.435 37.027 1.00 83.34 C
ATOM 24 P G A 20 89.759 4.591 39.557 1.00117.42 P
ATOM 25 OP1 G A 20 89.415 3.601 40.608 1.00121.56 O
ATOM 26 OP2 G A 20 88.856 4.768 38.389 1.00101.78 O
ATOM 27 O5' G A 20 89.986 6.004 40.249 1.00 98.55 O
TER
ATOM 1 O3' A B 61 98.355 18.514 41.373 1.00118.98 O
ATOM 2 P C B 62 99.596 17.610 40.898 1.00120.64 P
ATOM 3 OP1 C B 62 100.840 18.358 41.207 1.00127.07 O
ATOM 4 OP2 C B 62 99.326 17.180 39.502 1.00121.08 O
ATOM 5 O5' C B 62 99.530 16.318 41.830 1.00117.72 O
ATOM 6 C5' C B 62 100.112 16.315 43.132 1.00115.03 C
ATOM 7 C4' C B 62 99.840 14.999 43.824 1.00117.45 C
ATOM 8 O4' C B 62 98.403 14.842 43.998 1.00111.50 O
ATOM 9 C3' C B 62 100.252 13.748 43.061 1.00119.67 C
ATOM 10 O3' C B 62 101.629 13.429 43.229 1.00126.12 O
ATOM 11 C2' C B 62 99.347 12.696 43.685 1.00114.70 C
ATOM 12 O2' C B 62 99.791 12.273 44.960 1.00117.98 O
ATOM 13 C1' C B 62 98.042 13.481 43.813 1.00106.50 C
ATOM 14 N1 C B 62 97.258 13.380 42.575 1.00 99.92 N
ATOM 15 C2 C B 62 96.515 12.222 42.345 1.00101.58 C
ATOM 16 O2 C B 62 96.511 11.331 43.208 1.00105.78 O
ATOM 17 N3 C B 62 95.822 12.101 41.189 1.00 98.87 N
ATOM 18 C4 C B 62 95.850 13.087 40.289 1.00 96.31 C
ATOM 19 N4 C B 62 95.156 12.924 39.161 1.00 95.54 N
ATOM 20 C5 C B 62 96.590 14.283 40.506 1.00 93.96 C
ATOM 21 C6 C B 62 97.268 14.389 41.653 1.00 96.80 C
ATOM 22 P C B 63 102.406 12.630 42.067 1.00125.99 P
ATOM 23 OP1 C B 63 103.761 12.284 42.562 1.00134.80 O
ATOM 24 OP2 C B 63 102.260 13.399 40.804 1.00126.90 O
ATOM 25 O5' C B 63 101.581 11.278 41.904 1.00122.27 O
TER
Atoms:
OP1: (89.520,2.488,33.178)
OP2: (90.107,4.985,33.208)
C3': (91.753,5.046,37.946)
C1': (93.701,5.913,36.938)
C5': (90.936,3.939,35.828)
O4': (93.102,4.992,36.037)
C8: (92.885,7.636,35.244)
O2': (93.918,4.860,39.106)
C6: (93.800,10.765,36.559)
C5: (93.497,9.450,36.167)
C4: (93.880,8.435,37.027)
P: (90.535,3.565,33.272)
C4': (92.109,4.203,36.737)
C2': (93.084,5.685,38.318)
C2: (94.742,9.856,38.468)
N1: (94.435,10.938,37.741)
N3: (94.513,8.572,38.205)
N6: (93.498,11.845,35.830)
N7: (92.868,8.932,35.044)
N9: (93.489,7.265,36.421)
O5': (91.376,3.366,34.608)
O3': (91.208,4.239,38.975)
OP2: (90.107,4.985,33.208)
C3': (91.753,5.046,37.946)
C1': (93.701,5.913,36.938)
C5': (90.936,3.939,35.828)
O4': (93.102,4.992,36.037)
C8: (92.885,7.636,35.244)
O2': (93.918,4.860,39.106)
C6: (93.800,10.765,36.559)
C5: (93.497,9.450,36.167)
C4: (93.880,8.435,37.027)
P: (90.535,3.565,33.272)
C4': (92.109,4.203,36.737)
C2': (93.084,5.685,38.318)
C2: (94.742,9.856,38.468)
N1: (94.435,10.938,37.741)
N3: (94.513,8.572,38.205)
N6: (93.498,11.845,35.830)
N7: (92.868,8.932,35.044)
N9: (93.489,7.265,36.421)
O5': (91.376,3.366,34.608)
O3': (91.208,4.239,38.975)
C2: (96.515,12.222,42.345)
OP1: (100.840,18.358,41.207)
OP2: (99.326,17.180,39.502)
C4: (95.850,13.087,40.289)
O5': (99.530,16.318,41.830)
C3': (100.252,13.748,43.061)
C1': (98.042,13.481,43.813)
O4': (98.403,14.842,43.998)
C5': (100.112,16.315,43.132)
P: (99.596,17.610,40.898)
O2: (96.511,11.331,43.208)
C4': (99.840,14.999,43.824)
C2': (99.347,12.696,43.685)
O2': (99.791,12.273,44.960)
N1: (97.258,13.380,42.575)
N3: (95.822,12.101,41.189)
N4: (95.156,12.924,39.161)
C6: (97.268,14.389,41.653)
C5: (96.590,14.283,40.506)
O3': (101.629,13.429,43.229)
OP1: (100.840,18.358,41.207)
OP2: (99.326,17.180,39.502)
C4: (95.850,13.087,40.289)
O5': (99.530,16.318,41.830)
C3': (100.252,13.748,43.061)
C1': (98.042,13.481,43.813)
O4': (98.403,14.842,43.998)
C5': (100.112,16.315,43.132)
P: (99.596,17.610,40.898)
O2: (96.511,11.331,43.208)
C4': (99.840,14.999,43.824)
C2': (99.347,12.696,43.685)
O2': (99.791,12.273,44.960)
N1: (97.258,13.380,42.575)
N3: (95.822,12.101,41.189)
N4: (95.156,12.924,39.161)
C6: (97.268,14.389,41.653)
C5: (96.590,14.283,40.506)
O3': (101.629,13.429,43.229)
Image (generated by PyMOL):