Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3PDR:X49:X62
Extra
PDB:
ATOM 1 O3' A A 48 45.917 3.598 25.815 1.00 50.36 O
ATOM 2 P A A 49 46.397 4.008 24.330 1.00 49.59 P
ATOM 3 OP1 A A 49 47.547 4.906 24.598 1.00 59.27 O
ATOM 4 OP2 A A 49 45.223 4.517 23.574 1.00 49.47 O
ATOM 5 O5' A A 49 46.914 2.659 23.665 1.00 48.95 O
ATOM 6 C5' A A 49 48.114 2.029 24.081 1.00 45.65 C
ATOM 7 C4' A A 49 48.176 0.618 23.564 1.00 45.59 C
ATOM 8 O4' A A 49 47.019 -0.111 24.047 1.00 46.32 O
ATOM 9 C3' A A 49 48.106 0.468 22.052 1.00 48.24 C
ATOM 10 O3' A A 49 49.362 0.641 21.419 1.00 51.74 O
ATOM 11 C2' A A 49 47.522 -0.928 21.874 1.00 48.39 C
ATOM 12 O2' A A 49 48.516 -1.930 22.041 1.00 45.09 O
ATOM 13 C1' A A 49 46.545 -0.992 23.048 1.00 46.51 C
ATOM 14 N9 A A 49 45.213 -0.533 22.627 1.00 43.98 N
ATOM 15 C8 A A 49 44.608 0.664 22.923 1.00 43.97 C
ATOM 16 N7 A A 49 43.419 0.792 22.384 1.00 45.68 N
ATOM 17 C5 A A 49 43.240 -0.396 21.684 1.00 41.97 C
ATOM 18 C6 A A 49 42.176 -0.878 20.896 1.00 44.75 C
ATOM 19 N6 A A 49 41.053 -0.187 20.674 1.00 42.60 N
ATOM 20 N1 A A 49 42.316 -2.104 20.332 1.00 45.36 N
ATOM 21 C2 A A 49 43.453 -2.786 20.562 1.00 46.61 C
ATOM 22 N3 A A 49 44.520 -2.439 21.286 1.00 43.69 N
ATOM 23 C4 A A 49 44.342 -1.219 21.823 1.00 42.67 C
ATOM 24 P U A 50 49.542 1.704 20.223 1.00 53.10 P
ATOM 25 OP1 U A 50 50.977 1.630 19.845 1.00 55.71 O
ATOM 26 OP2 U A 50 49.006 3.007 20.709 1.00 49.63 O
ATOM 27 O5' U A 50 48.677 1.053 19.057 1.00 47.39 O
TER
ATOM 1 O3' G B 61 33.215 -0.524 14.266 1.00 32.47 O
ATOM 2 P C B 62 32.660 -1.623 15.296 1.00 34.35 P
ATOM 3 OP1 C B 62 31.872 -2.555 14.449 1.00 38.44 O
ATOM 4 OP2 C B 62 31.977 -0.933 16.422 1.00 29.87 O
ATOM 5 O5' C B 62 33.992 -2.290 15.862 1.00 31.43 O
ATOM 6 C5' C B 62 34.888 -3.024 15.041 1.00 37.62 C
ATOM 7 C4' C B 62 36.098 -3.483 15.817 1.00 37.42 C
ATOM 8 O4' C B 62 36.917 -2.348 16.210 1.00 41.73 O
ATOM 9 C3' C B 62 35.817 -4.207 17.123 1.00 40.16 C
ATOM 10 O3' C B 62 35.501 -5.572 16.919 1.00 39.43 O
ATOM 11 C2' C B 62 37.115 -4.000 17.890 1.00 43.31 C
ATOM 12 O2' C B 62 38.107 -4.882 17.389 1.00 44.88 O
ATOM 13 C1' C B 62 37.496 -2.577 17.478 1.00 37.76 C
ATOM 14 N1 C B 62 37.003 -1.535 18.412 1.00 37.88 N
ATOM 15 C2 C B 62 37.775 -1.184 19.529 1.00 38.14 C
ATOM 16 O2 C B 62 38.849 -1.762 19.720 1.00 40.93 O
ATOM 17 N3 C B 62 37.327 -0.237 20.384 1.00 38.57 N
ATOM 18 C4 C B 62 36.160 0.368 20.151 1.00 38.92 C
ATOM 19 N4 C B 62 35.751 1.294 21.016 1.00 39.38 N
ATOM 20 C5 C B 62 35.353 0.041 19.025 1.00 35.96 C
ATOM 21 C6 C B 62 35.808 -0.902 18.189 1.00 34.51 C
ATOM 22 P C B 63 34.211 -6.267 17.582 1.00 43.68 P
ATOM 23 OP1 C B 63 34.212 -7.607 16.941 1.00 50.02 O
ATOM 24 OP2 C B 63 33.003 -5.423 17.455 1.00 39.23 O
ATOM 25 O5' C B 63 34.619 -6.414 19.112 1.00 41.89 O
TER
ATOM 2 P A A 49 46.397 4.008 24.330 1.00 49.59 P
ATOM 3 OP1 A A 49 47.547 4.906 24.598 1.00 59.27 O
ATOM 4 OP2 A A 49 45.223 4.517 23.574 1.00 49.47 O
ATOM 5 O5' A A 49 46.914 2.659 23.665 1.00 48.95 O
ATOM 6 C5' A A 49 48.114 2.029 24.081 1.00 45.65 C
ATOM 7 C4' A A 49 48.176 0.618 23.564 1.00 45.59 C
ATOM 8 O4' A A 49 47.019 -0.111 24.047 1.00 46.32 O
ATOM 9 C3' A A 49 48.106 0.468 22.052 1.00 48.24 C
ATOM 10 O3' A A 49 49.362 0.641 21.419 1.00 51.74 O
ATOM 11 C2' A A 49 47.522 -0.928 21.874 1.00 48.39 C
ATOM 12 O2' A A 49 48.516 -1.930 22.041 1.00 45.09 O
ATOM 13 C1' A A 49 46.545 -0.992 23.048 1.00 46.51 C
ATOM 14 N9 A A 49 45.213 -0.533 22.627 1.00 43.98 N
ATOM 15 C8 A A 49 44.608 0.664 22.923 1.00 43.97 C
ATOM 16 N7 A A 49 43.419 0.792 22.384 1.00 45.68 N
ATOM 17 C5 A A 49 43.240 -0.396 21.684 1.00 41.97 C
ATOM 18 C6 A A 49 42.176 -0.878 20.896 1.00 44.75 C
ATOM 19 N6 A A 49 41.053 -0.187 20.674 1.00 42.60 N
ATOM 20 N1 A A 49 42.316 -2.104 20.332 1.00 45.36 N
ATOM 21 C2 A A 49 43.453 -2.786 20.562 1.00 46.61 C
ATOM 22 N3 A A 49 44.520 -2.439 21.286 1.00 43.69 N
ATOM 23 C4 A A 49 44.342 -1.219 21.823 1.00 42.67 C
ATOM 24 P U A 50 49.542 1.704 20.223 1.00 53.10 P
ATOM 25 OP1 U A 50 50.977 1.630 19.845 1.00 55.71 O
ATOM 26 OP2 U A 50 49.006 3.007 20.709 1.00 49.63 O
ATOM 27 O5' U A 50 48.677 1.053 19.057 1.00 47.39 O
TER
ATOM 1 O3' G B 61 33.215 -0.524 14.266 1.00 32.47 O
ATOM 2 P C B 62 32.660 -1.623 15.296 1.00 34.35 P
ATOM 3 OP1 C B 62 31.872 -2.555 14.449 1.00 38.44 O
ATOM 4 OP2 C B 62 31.977 -0.933 16.422 1.00 29.87 O
ATOM 5 O5' C B 62 33.992 -2.290 15.862 1.00 31.43 O
ATOM 6 C5' C B 62 34.888 -3.024 15.041 1.00 37.62 C
ATOM 7 C4' C B 62 36.098 -3.483 15.817 1.00 37.42 C
ATOM 8 O4' C B 62 36.917 -2.348 16.210 1.00 41.73 O
ATOM 9 C3' C B 62 35.817 -4.207 17.123 1.00 40.16 C
ATOM 10 O3' C B 62 35.501 -5.572 16.919 1.00 39.43 O
ATOM 11 C2' C B 62 37.115 -4.000 17.890 1.00 43.31 C
ATOM 12 O2' C B 62 38.107 -4.882 17.389 1.00 44.88 O
ATOM 13 C1' C B 62 37.496 -2.577 17.478 1.00 37.76 C
ATOM 14 N1 C B 62 37.003 -1.535 18.412 1.00 37.88 N
ATOM 15 C2 C B 62 37.775 -1.184 19.529 1.00 38.14 C
ATOM 16 O2 C B 62 38.849 -1.762 19.720 1.00 40.93 O
ATOM 17 N3 C B 62 37.327 -0.237 20.384 1.00 38.57 N
ATOM 18 C4 C B 62 36.160 0.368 20.151 1.00 38.92 C
ATOM 19 N4 C B 62 35.751 1.294 21.016 1.00 39.38 N
ATOM 20 C5 C B 62 35.353 0.041 19.025 1.00 35.96 C
ATOM 21 C6 C B 62 35.808 -0.902 18.189 1.00 34.51 C
ATOM 22 P C B 63 34.211 -6.267 17.582 1.00 43.68 P
ATOM 23 OP1 C B 63 34.212 -7.607 16.941 1.00 50.02 O
ATOM 24 OP2 C B 63 33.003 -5.423 17.455 1.00 39.23 O
ATOM 25 O5' C B 63 34.619 -6.414 19.112 1.00 41.89 O
TER
Atoms:
OP1: (47.547,4.906,24.598)
OP2: (45.223,4.517,23.574)
C3': (48.106,0.468,22.052)
C1': (46.545,-0.992,23.048)
C5': (48.114,2.029,24.081)
O4': (47.019,-0.111,24.047)
C8: (44.608,0.664,22.923)
O2': (48.516,-1.930,22.041)
C6: (42.176,-0.878,20.896)
C5: (43.240,-0.396,21.684)
C4: (44.342,-1.219,21.823)
P: (46.397,4.008,24.330)
C4': (48.176,0.618,23.564)
C2': (47.522,-0.928,21.874)
C2: (43.453,-2.786,20.562)
N1: (42.316,-2.104,20.332)
N3: (44.520,-2.439,21.286)
N6: (41.053,-0.187,20.674)
N7: (43.419,0.792,22.384)
N9: (45.213,-0.533,22.627)
O5': (46.914,2.659,23.665)
O3': (49.362,0.641,21.419)
OP2: (45.223,4.517,23.574)
C3': (48.106,0.468,22.052)
C1': (46.545,-0.992,23.048)
C5': (48.114,2.029,24.081)
O4': (47.019,-0.111,24.047)
C8: (44.608,0.664,22.923)
O2': (48.516,-1.930,22.041)
C6: (42.176,-0.878,20.896)
C5: (43.240,-0.396,21.684)
C4: (44.342,-1.219,21.823)
P: (46.397,4.008,24.330)
C4': (48.176,0.618,23.564)
C2': (47.522,-0.928,21.874)
C2: (43.453,-2.786,20.562)
N1: (42.316,-2.104,20.332)
N3: (44.520,-2.439,21.286)
N6: (41.053,-0.187,20.674)
N7: (43.419,0.792,22.384)
N9: (45.213,-0.533,22.627)
O5': (46.914,2.659,23.665)
O3': (49.362,0.641,21.419)
C2: (37.775,-1.184,19.529)
OP1: (31.872,-2.555,14.449)
OP2: (31.977,-0.933,16.422)
C4: (36.160,0.368,20.151)
O5': (33.992,-2.290,15.862)
C3': (35.817,-4.207,17.123)
C1': (37.496,-2.577,17.478)
O4': (36.917,-2.348,16.210)
C5': (34.888,-3.024,15.041)
P: (32.660,-1.623,15.296)
O2: (38.849,-1.762,19.720)
C4': (36.098,-3.483,15.817)
C2': (37.115,-4.000,17.890)
O2': (38.107,-4.882,17.389)
N1: (37.003,-1.535,18.412)
N3: (37.327,-0.237,20.384)
N4: (35.751,1.294,21.016)
C6: (35.808,-0.902,18.189)
C5: (35.353,0.041,19.025)
O3': (35.501,-5.572,16.919)
OP1: (31.872,-2.555,14.449)
OP2: (31.977,-0.933,16.422)
C4: (36.160,0.368,20.151)
O5': (33.992,-2.290,15.862)
C3': (35.817,-4.207,17.123)
C1': (37.496,-2.577,17.478)
O4': (36.917,-2.348,16.210)
C5': (34.888,-3.024,15.041)
P: (32.660,-1.623,15.296)
O2: (38.849,-1.762,19.720)
C4': (36.098,-3.483,15.817)
C2': (37.115,-4.000,17.890)
O2': (38.107,-4.882,17.389)
N1: (37.003,-1.535,18.412)
N3: (37.327,-0.237,20.384)
N4: (35.751,1.294,21.016)
C6: (35.808,-0.902,18.189)
C5: (35.353,0.041,19.025)
O3': (35.501,-5.572,16.919)
Image (generated by PyMOL):