ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A1817:A1828

Extra

PDB:
ATOM 1 O3' A A1816 114.919 121.009 57.604 1.00 43.18 O
ATOM 2 P A A1817 113.434 120.752 58.128 1.00 42.48 P
ATOM 3 OP1 A A1817 113.272 119.289 58.097 1.00 43.87 O
ATOM 4 OP2 A A1817 112.509 121.621 57.345 1.00 41.90 O
ATOM 5 O5' A A1817 113.473 121.176 59.659 1.00 41.53 O
ATOM 6 C5' A A1817 114.237 120.401 60.601 1.00 43.00 C
ATOM 7 C4' A A1817 114.154 121.018 61.969 1.00 44.70 C
ATOM 8 O4' A A1817 114.771 122.334 61.929 1.00 46.18 O
ATOM 9 C3' A A1817 112.735 121.270 62.455 1.00 45.61 C
ATOM 10 O3' A A1817 112.195 120.119 63.099 1.00 45.65 O
ATOM 11 C2' A A1817 112.940 122.427 63.415 1.00 44.86 C
ATOM 12 O2' A A1817 113.532 121.962 64.611 1.00 45.11 O
ATOM 13 C1' A A1817 113.977 123.258 62.651 1.00 44.58 C
ATOM 14 N9 A A1817 113.429 124.212 61.681 1.00 42.75 N
ATOM 15 C8 A A1817 113.355 124.081 60.314 1.00 42.38 C
ATOM 16 N7 A A1817 112.831 125.121 59.711 1.00 43.06 N
ATOM 17 C5 A A1817 112.531 125.991 60.751 1.00 42.15 C
ATOM 18 C6 A A1817 111.944 127.274 60.779 1.00 41.16 C
ATOM 19 N6 A A1817 111.538 127.935 59.695 1.00 41.16 N
ATOM 20 N1 A A1817 111.787 127.859 61.974 1.00 41.11 N
ATOM 21 C2 A A1817 112.194 127.200 63.063 1.00 42.64 C
ATOM 22 N3 A A1817 112.757 125.997 63.168 1.00 43.72 N
ATOM 23 C4 A A1817 112.895 125.441 61.964 1.00 42.46 C
ATOM 24 P U A1818 110.685 119.669 62.794 1.00 45.27 P
ATOM 25 OP1 U A1818 110.381 118.549 63.714 1.00 43.21 O
ATOM 26 OP2 U A1818 110.570 119.479 61.320 1.00 44.22 O
ATOM 27 O5' U A1818 109.794 120.930 63.188 1.00 44.82 O
TER

ATOM 1 O3' A B1827 104.950 136.091 58.147 1.00 41.68 O
ATOM 2 P C B1828 106.400 136.766 58.247 1.00 41.02 P
ATOM 3 OP1 C B1828 106.232 138.074 58.938 1.00 41.10 O
ATOM 4 OP2 C B1828 106.979 136.740 56.884 1.00 39.90 O
ATOM 5 O5' C B1828 107.207 135.789 59.223 1.00 40.78 O
ATOM 6 C5' C B1828 106.887 135.742 60.640 1.00 40.79 C
ATOM 7 C4' C B1828 107.687 134.665 61.353 1.00 40.99 C
ATOM 8 O4' C B1828 107.358 133.380 60.766 1.00 39.76 O
ATOM 9 C3' C B1828 109.206 134.753 61.241 1.00 42.90 C
ATOM 10 O3' C B1828 109.777 135.602 62.238 1.00 46.37 O
ATOM 11 C2' C B1828 109.631 133.309 61.461 1.00 41.44 C
ATOM 12 O2' C B1828 109.624 132.919 62.819 1.00 41.96 O
ATOM 13 C1' C B1828 108.512 132.563 60.743 1.00 38.30 C
ATOM 14 N1 C B1828 108.830 132.208 59.350 1.00 34.50 N
ATOM 15 C2 C B1828 109.575 131.063 59.131 1.00 32.94 C
ATOM 16 O2 C B1828 109.996 130.437 60.107 1.00 35.35 O
ATOM 17 N3 C B1828 109.828 130.666 57.872 1.00 31.01 N
ATOM 18 C4 C B1828 109.382 131.383 56.845 1.00 30.85 C
ATOM 19 N4 C B1828 109.642 130.933 55.618 1.00 30.38 N
ATOM 20 C5 C B1828 108.647 132.585 57.034 1.00 31.89 C
ATOM 21 C6 C B1828 108.394 132.959 58.295 1.00 34.03 C
ATOM 22 P U B1829 111.059 136.509 61.882 1.00 47.58 P
ATOM 23 OP1 U B1829 112.257 135.645 61.714 1.00 45.72 O
ATOM 24 OP2 U B1829 111.083 137.622 62.877 1.00 47.64 O
ATOM 25 O5' U B1829 110.709 137.113 60.453 1.00 46.47 O
TER

Atoms:
OP1: (113.272,119.289,58.097)
OP2: (112.509,121.621,57.345)
C3': (112.735,121.270,62.455)
C1': (113.977,123.258,62.651)
C5': (114.237,120.401,60.601)
O4': (114.771,122.334,61.929)
C8: (113.355,124.081,60.314)
O2': (113.532,121.962,64.611)
C6: (111.944,127.274,60.779)
C5: (112.531,125.991,60.751)
C4: (112.895,125.441,61.964)
P: (113.434,120.752,58.128)
C4': (114.154,121.018,61.969)
C2': (112.940,122.427,63.415)
C2: (112.194,127.200,63.063)
N1: (111.787,127.859,61.974)
N3: (112.757,125.997,63.168)
N6: (111.538,127.935,59.695)
N7: (112.831,125.121,59.711)
N9: (113.429,124.212,61.681)
O5': (113.473,121.176,59.659)
O3': (112.195,120.119,63.099)
C2: (109.575,131.063,59.131)
OP1: (106.232,138.074,58.938)
OP2: (106.979,136.740,56.884)
C4: (109.382,131.383,56.845)
O5': (107.207,135.789,59.223)
C3': (109.206,134.753,61.241)
C1': (108.512,132.563,60.743)
O4': (107.358,133.380,60.766)
C5': (106.887,135.742,60.640)
P: (106.400,136.766,58.247)
O2: (109.996,130.437,60.107)
C4': (107.687,134.665,61.353)
C2': (109.631,133.309,61.461)
O2': (109.624,132.919,62.819)
N1: (108.830,132.208,59.350)
N3: (109.828,130.666,57.872)
N4: (109.642,130.933,55.618)
C6: (108.394,132.959,58.295)
C5: (108.647,132.585,57.034)
O3': (109.777,135.602,62.238)
Image (generated by PyMOL):
PyMOL image
show in jmol