Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0429:030
Extra
PDB:
ATOM 1 O3' C A 428 56.429 122.185 38.315 1.00 61.56 O
ATOM 2 P A A 429 55.046 122.738 38.924 1.00 64.55 P
ATOM 3 OP1 A A 429 55.321 123.106 40.342 1.00 63.60 O
ATOM 4 OP2 A A 429 53.953 121.779 38.613 1.00 64.41 O
ATOM 5 O5' A A 429 54.775 124.083 38.122 1.00 64.12 O
ATOM 6 C5' A A 429 55.679 125.196 38.221 1.00 65.23 C
ATOM 7 C4' A A 429 55.247 126.292 37.279 1.00 65.98 C
ATOM 8 O4' A A 429 55.228 125.760 35.927 1.00 66.74 O
ATOM 9 C3' A A 429 53.853 126.857 37.524 1.00 65.83 C
ATOM 10 O3' A A 429 53.822 128.215 37.145 1.00 65.03 O
ATOM 11 C2' A A 429 52.974 126.029 36.599 1.00 66.01 C
ATOM 12 O2' A A 429 51.818 126.726 36.179 1.00 64.96 O
ATOM 13 C1' A A 429 53.908 125.769 35.421 1.00 67.13 C
ATOM 14 N9 A A 429 53.653 124.458 34.828 1.00 70.13 N
ATOM 15 C8 A A 429 53.646 123.234 35.454 1.00 70.40 C
ATOM 16 N7 A A 429 53.350 122.238 34.660 1.00 72.03 N
ATOM 17 C5 A A 429 53.151 122.843 33.428 1.00 73.21 C
ATOM 18 C6 A A 429 52.798 122.332 32.169 1.00 74.25 C
ATOM 19 N6 A A 429 52.546 121.041 31.940 1.00 74.88 N
ATOM 20 N1 A A 429 52.705 123.202 31.140 1.00 75.26 N
ATOM 21 C2 A A 429 52.939 124.499 31.373 1.00 75.04 C
ATOM 22 N3 A A 429 53.261 125.103 32.514 1.00 74.79 N
ATOM 23 C4 A A 429 53.351 124.208 33.514 1.00 72.67 C
ATOM 24 P A A 430 53.565 129.333 38.255 1.00 65.12 P
ATOM 25 OP1 A A 430 54.456 128.987 39.404 1.00 64.61 O
ATOM 26 OP2 A A 430 52.100 129.450 38.472 1.00 64.76 O
ATOM 27 O5' A A 430 54.079 130.665 37.550 1.00 63.22 O
TER
ATOM 1 O3' G B 29 48.210 125.053 22.972 1.00 64.69 O
ATOM 2 P C B 30 49.731 124.848 22.461 1.00 65.90 P
ATOM 3 OP1 C B 30 49.688 124.993 20.986 1.00 64.67 O
ATOM 4 OP2 C B 30 50.308 123.611 23.053 1.00 63.71 O
ATOM 5 O5' C B 30 50.532 126.095 23.063 1.00 65.45 O
ATOM 6 C5' C B 30 50.186 127.456 22.705 1.00 64.66 C
ATOM 7 C4' C B 30 50.865 128.448 23.636 1.00 63.73 C
ATOM 8 O4' C B 30 50.422 128.229 25.004 1.00 63.60 O
ATOM 9 C3' C B 30 52.381 128.374 23.720 1.00 62.53 C
ATOM 10 O3' C B 30 53.011 129.096 22.674 1.00 60.69 O
ATOM 11 C2' C B 30 52.661 129.010 25.072 1.00 62.73 C
ATOM 12 O2' C B 30 52.599 130.423 25.010 1.00 62.05 O
ATOM 13 C1' C B 30 51.499 128.458 25.903 1.00 63.14 C
ATOM 14 N1 C B 30 51.816 127.175 26.570 1.00 64.01 N
ATOM 15 C2 C B 30 52.360 127.181 27.870 1.00 63.60 C
ATOM 16 O2 C B 30 52.568 128.265 28.441 1.00 62.66 O
ATOM 17 N3 C B 30 52.643 125.999 28.468 1.00 64.04 N
ATOM 18 C4 C B 30 52.408 124.851 27.825 1.00 65.19 C
ATOM 19 N4 C B 30 52.702 123.708 28.447 1.00 65.34 N
ATOM 20 C5 C B 30 51.861 124.819 26.513 1.00 65.42 C
ATOM 21 C6 C B 30 51.583 125.988 25.930 1.00 65.16 C
ATOM 22 P G B 31 54.534 128.767 22.289 1.00 61.57 P
ATOM 23 OP1 G B 31 54.948 129.752 21.254 1.00 61.25 O
ATOM 24 OP2 G B 31 54.658 127.302 22.009 1.00 59.27 O
ATOM 25 O5' G B 31 55.348 129.114 23.615 1.00 61.16 O
TER
ATOM 2 P A A 429 55.046 122.738 38.924 1.00 64.55 P
ATOM 3 OP1 A A 429 55.321 123.106 40.342 1.00 63.60 O
ATOM 4 OP2 A A 429 53.953 121.779 38.613 1.00 64.41 O
ATOM 5 O5' A A 429 54.775 124.083 38.122 1.00 64.12 O
ATOM 6 C5' A A 429 55.679 125.196 38.221 1.00 65.23 C
ATOM 7 C4' A A 429 55.247 126.292 37.279 1.00 65.98 C
ATOM 8 O4' A A 429 55.228 125.760 35.927 1.00 66.74 O
ATOM 9 C3' A A 429 53.853 126.857 37.524 1.00 65.83 C
ATOM 10 O3' A A 429 53.822 128.215 37.145 1.00 65.03 O
ATOM 11 C2' A A 429 52.974 126.029 36.599 1.00 66.01 C
ATOM 12 O2' A A 429 51.818 126.726 36.179 1.00 64.96 O
ATOM 13 C1' A A 429 53.908 125.769 35.421 1.00 67.13 C
ATOM 14 N9 A A 429 53.653 124.458 34.828 1.00 70.13 N
ATOM 15 C8 A A 429 53.646 123.234 35.454 1.00 70.40 C
ATOM 16 N7 A A 429 53.350 122.238 34.660 1.00 72.03 N
ATOM 17 C5 A A 429 53.151 122.843 33.428 1.00 73.21 C
ATOM 18 C6 A A 429 52.798 122.332 32.169 1.00 74.25 C
ATOM 19 N6 A A 429 52.546 121.041 31.940 1.00 74.88 N
ATOM 20 N1 A A 429 52.705 123.202 31.140 1.00 75.26 N
ATOM 21 C2 A A 429 52.939 124.499 31.373 1.00 75.04 C
ATOM 22 N3 A A 429 53.261 125.103 32.514 1.00 74.79 N
ATOM 23 C4 A A 429 53.351 124.208 33.514 1.00 72.67 C
ATOM 24 P A A 430 53.565 129.333 38.255 1.00 65.12 P
ATOM 25 OP1 A A 430 54.456 128.987 39.404 1.00 64.61 O
ATOM 26 OP2 A A 430 52.100 129.450 38.472 1.00 64.76 O
ATOM 27 O5' A A 430 54.079 130.665 37.550 1.00 63.22 O
TER
ATOM 1 O3' G B 29 48.210 125.053 22.972 1.00 64.69 O
ATOM 2 P C B 30 49.731 124.848 22.461 1.00 65.90 P
ATOM 3 OP1 C B 30 49.688 124.993 20.986 1.00 64.67 O
ATOM 4 OP2 C B 30 50.308 123.611 23.053 1.00 63.71 O
ATOM 5 O5' C B 30 50.532 126.095 23.063 1.00 65.45 O
ATOM 6 C5' C B 30 50.186 127.456 22.705 1.00 64.66 C
ATOM 7 C4' C B 30 50.865 128.448 23.636 1.00 63.73 C
ATOM 8 O4' C B 30 50.422 128.229 25.004 1.00 63.60 O
ATOM 9 C3' C B 30 52.381 128.374 23.720 1.00 62.53 C
ATOM 10 O3' C B 30 53.011 129.096 22.674 1.00 60.69 O
ATOM 11 C2' C B 30 52.661 129.010 25.072 1.00 62.73 C
ATOM 12 O2' C B 30 52.599 130.423 25.010 1.00 62.05 O
ATOM 13 C1' C B 30 51.499 128.458 25.903 1.00 63.14 C
ATOM 14 N1 C B 30 51.816 127.175 26.570 1.00 64.01 N
ATOM 15 C2 C B 30 52.360 127.181 27.870 1.00 63.60 C
ATOM 16 O2 C B 30 52.568 128.265 28.441 1.00 62.66 O
ATOM 17 N3 C B 30 52.643 125.999 28.468 1.00 64.04 N
ATOM 18 C4 C B 30 52.408 124.851 27.825 1.00 65.19 C
ATOM 19 N4 C B 30 52.702 123.708 28.447 1.00 65.34 N
ATOM 20 C5 C B 30 51.861 124.819 26.513 1.00 65.42 C
ATOM 21 C6 C B 30 51.583 125.988 25.930 1.00 65.16 C
ATOM 22 P G B 31 54.534 128.767 22.289 1.00 61.57 P
ATOM 23 OP1 G B 31 54.948 129.752 21.254 1.00 61.25 O
ATOM 24 OP2 G B 31 54.658 127.302 22.009 1.00 59.27 O
ATOM 25 O5' G B 31 55.348 129.114 23.615 1.00 61.16 O
TER
Atoms:
OP1: (55.321,123.106,40.342)
OP2: (53.953,121.779,38.613)
C3': (53.853,126.857,37.524)
C1': (53.908,125.769,35.421)
C5': (55.679,125.196,38.221)
O4': (55.228,125.760,35.927)
C8: (53.646,123.234,35.454)
O2': (51.818,126.726,36.179)
C6: (52.798,122.332,32.169)
C5: (53.151,122.843,33.428)
C4: (53.351,124.208,33.514)
P: (55.046,122.738,38.924)
C4': (55.247,126.292,37.279)
C2': (52.974,126.029,36.599)
C2: (52.939,124.499,31.373)
N1: (52.705,123.202,31.140)
N3: (53.261,125.103,32.514)
N6: (52.546,121.041,31.940)
N7: (53.350,122.238,34.660)
N9: (53.653,124.458,34.828)
O5': (54.775,124.083,38.122)
O3': (53.822,128.215,37.145)
OP2: (53.953,121.779,38.613)
C3': (53.853,126.857,37.524)
C1': (53.908,125.769,35.421)
C5': (55.679,125.196,38.221)
O4': (55.228,125.760,35.927)
C8: (53.646,123.234,35.454)
O2': (51.818,126.726,36.179)
C6: (52.798,122.332,32.169)
C5: (53.151,122.843,33.428)
C4: (53.351,124.208,33.514)
P: (55.046,122.738,38.924)
C4': (55.247,126.292,37.279)
C2': (52.974,126.029,36.599)
C2: (52.939,124.499,31.373)
N1: (52.705,123.202,31.140)
N3: (53.261,125.103,32.514)
N6: (52.546,121.041,31.940)
N7: (53.350,122.238,34.660)
N9: (53.653,124.458,34.828)
O5': (54.775,124.083,38.122)
O3': (53.822,128.215,37.145)
C2: (52.360,127.181,27.870)
OP1: (49.688,124.993,20.986)
OP2: (50.308,123.611,23.053)
C4: (52.408,124.851,27.825)
O5': (50.532,126.095,23.063)
C3': (52.381,128.374,23.720)
C1': (51.499,128.458,25.903)
O4': (50.422,128.229,25.004)
C5': (50.186,127.456,22.705)
P: (49.731,124.848,22.461)
O2: (52.568,128.265,28.441)
C4': (50.865,128.448,23.636)
C2': (52.661,129.010,25.072)
O2': (52.599,130.423,25.010)
N1: (51.816,127.175,26.570)
N3: (52.643,125.999,28.468)
N4: (52.702,123.708,28.447)
C6: (51.583,125.988,25.930)
C5: (51.861,124.819,26.513)
O3': (53.011,129.096,22.674)
OP1: (49.688,124.993,20.986)
OP2: (50.308,123.611,23.053)
C4: (52.408,124.851,27.825)
O5': (50.532,126.095,23.063)
C3': (52.381,128.374,23.720)
C1': (51.499,128.458,25.903)
O4': (50.422,128.229,25.004)
C5': (50.186,127.456,22.705)
P: (49.731,124.848,22.461)
O2: (52.568,128.265,28.441)
C4': (50.865,128.448,23.636)
C2': (52.661,129.010,25.072)
O2': (52.599,130.423,25.010)
N1: (51.816,127.175,26.570)
N3: (52.643,125.999,28.468)
N4: (52.702,123.708,28.447)
C6: (51.583,125.988,25.930)
C5: (51.861,124.819,26.513)
O3': (53.011,129.096,22.674)
Image (generated by PyMOL):