Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A517:A527
Extra
PDB:
ATOM 1 O3' C A 516 -108.922 11.898 -34.031 1.00 30.96 O
ATOM 2 P C A 517 -109.312 10.359 -33.858 1.00 21.81 P
ATOM 3 OP1 C A 517 -110.270 10.278 -32.718 1.00 21.81 O
ATOM 4 OP2 C A 517 -108.050 9.595 -33.783 1.00 21.81 O
ATOM 5 O5' C A 517 -110.053 10.030 -35.236 1.00 21.81 O
ATOM 6 C5' C A 517 -109.334 9.474 -36.338 1.00 21.81 C
ATOM 7 C4' C A 517 -110.254 9.102 -37.475 1.00 21.81 C
ATOM 8 O4' C A 517 -111.102 10.224 -37.800 1.00 21.81 O
ATOM 9 C3' C A 517 -109.583 8.747 -38.796 1.00 21.81 C
ATOM 10 O3' C A 517 -109.163 7.402 -38.850 1.00 21.81 O
ATOM 11 C2' C A 517 -110.641 9.071 -39.846 1.00 21.81 C
ATOM 12 O2' C A 517 -111.431 7.929 -40.121 1.00 21.81 O
ATOM 13 C1' C A 517 -111.508 10.132 -39.148 1.00 21.81 C
ATOM 14 N1 C A 517 -111.416 11.475 -39.786 1.00 21.30 N
ATOM 15 C2 C A 517 -111.938 11.596 -41.075 1.00 21.30 C
ATOM 16 O2 C A 517 -112.402 10.575 -41.602 1.00 21.30 O
ATOM 17 N3 C A 517 -111.914 12.787 -41.718 1.00 21.30 N
ATOM 18 C4 C A 517 -111.411 13.847 -41.100 1.00 21.30 C
ATOM 19 N4 C A 517 -111.403 15.002 -41.770 1.00 21.30 N
ATOM 20 C5 C A 517 -110.886 13.763 -39.775 1.00 21.30 C
ATOM 21 C6 C A 517 -110.911 12.576 -39.151 1.00 21.30 C
ATOM 22 P A A 518 -107.728 7.045 -39.457 1.00 14.02 P
ATOM 23 OP1 A A 518 -107.535 5.580 -39.329 1.00 14.02 O
ATOM 24 OP2 A A 518 -106.766 7.947 -38.790 1.00 14.02 O
ATOM 25 O5' A A 518 -107.873 7.443 -41.003 1.00 14.02 O
TER
ATOM 1 O3' C B 526 -107.256 23.387 -39.253 1.00 10.59 O
ATOM 2 P G B 527 -108.145 23.222 -37.925 1.00 26.01 P
ATOM 3 OP1 G B 527 -109.164 24.310 -37.941 1.00 26.01 O
ATOM 4 OP2 G B 527 -107.215 23.127 -36.777 1.00 26.01 O
ATOM 5 O5' G B 527 -108.846 21.818 -38.163 1.00 26.01 O
ATOM 6 C5' G B 527 -109.311 21.470 -39.455 1.00 26.01 C
ATOM 7 C4' G B 527 -109.453 19.978 -39.626 1.00 26.01 C
ATOM 8 O4' G B 527 -108.156 19.350 -39.800 1.00 26.01 O
ATOM 9 C3' G B 527 -110.048 19.207 -38.467 1.00 26.01 C
ATOM 10 O3' G B 527 -111.442 19.421 -38.304 1.00 26.01 O
ATOM 11 C2' G B 527 -109.663 17.780 -38.840 1.00 26.01 C
ATOM 12 O2' G B 527 -110.472 17.287 -39.898 1.00 26.01 O
ATOM 13 C1' G B 527 -108.243 18.000 -39.376 1.00 26.01 C
ATOM 14 N9 G B 527 -107.229 17.756 -38.336 1.00 26.09 N
ATOM 15 C8 G B 527 -106.569 18.639 -37.512 1.00 26.09 C
ATOM 16 N7 G B 527 -105.758 18.030 -36.676 1.00 26.09 N
ATOM 17 C5 G B 527 -105.903 16.677 -36.965 1.00 26.09 C
ATOM 18 C6 G B 527 -105.299 15.519 -36.410 1.00 26.09 C
ATOM 19 O6 G B 527 -104.462 15.440 -35.501 1.00 26.09 O
ATOM 20 N1 G B 527 -105.750 14.351 -37.010 1.00 26.09 N
ATOM 21 C2 G B 527 -106.659 14.280 -38.019 1.00 26.09 C
ATOM 22 N2 G B 527 -106.964 13.053 -38.466 1.00 26.09 N
ATOM 23 N3 G B 527 -107.226 15.343 -38.547 1.00 26.09 N
ATOM 24 C4 G B 527 -106.806 16.496 -37.982 1.00 26.09 C
ATOM 25 P G B 528 -111.972 20.351 -37.103 1.00 26.91 P
ATOM 26 OP1 G B 528 -112.650 21.535 -37.698 1.00 26.91 O
ATOM 27 OP2 G B 528 -110.833 20.581 -36.198 1.00 26.91 O
ATOM 28 O5' G B 528 -113.035 19.403 -36.407 1.00 26.91 O
TER
ATOM 2 P C A 517 -109.312 10.359 -33.858 1.00 21.81 P
ATOM 3 OP1 C A 517 -110.270 10.278 -32.718 1.00 21.81 O
ATOM 4 OP2 C A 517 -108.050 9.595 -33.783 1.00 21.81 O
ATOM 5 O5' C A 517 -110.053 10.030 -35.236 1.00 21.81 O
ATOM 6 C5' C A 517 -109.334 9.474 -36.338 1.00 21.81 C
ATOM 7 C4' C A 517 -110.254 9.102 -37.475 1.00 21.81 C
ATOM 8 O4' C A 517 -111.102 10.224 -37.800 1.00 21.81 O
ATOM 9 C3' C A 517 -109.583 8.747 -38.796 1.00 21.81 C
ATOM 10 O3' C A 517 -109.163 7.402 -38.850 1.00 21.81 O
ATOM 11 C2' C A 517 -110.641 9.071 -39.846 1.00 21.81 C
ATOM 12 O2' C A 517 -111.431 7.929 -40.121 1.00 21.81 O
ATOM 13 C1' C A 517 -111.508 10.132 -39.148 1.00 21.81 C
ATOM 14 N1 C A 517 -111.416 11.475 -39.786 1.00 21.30 N
ATOM 15 C2 C A 517 -111.938 11.596 -41.075 1.00 21.30 C
ATOM 16 O2 C A 517 -112.402 10.575 -41.602 1.00 21.30 O
ATOM 17 N3 C A 517 -111.914 12.787 -41.718 1.00 21.30 N
ATOM 18 C4 C A 517 -111.411 13.847 -41.100 1.00 21.30 C
ATOM 19 N4 C A 517 -111.403 15.002 -41.770 1.00 21.30 N
ATOM 20 C5 C A 517 -110.886 13.763 -39.775 1.00 21.30 C
ATOM 21 C6 C A 517 -110.911 12.576 -39.151 1.00 21.30 C
ATOM 22 P A A 518 -107.728 7.045 -39.457 1.00 14.02 P
ATOM 23 OP1 A A 518 -107.535 5.580 -39.329 1.00 14.02 O
ATOM 24 OP2 A A 518 -106.766 7.947 -38.790 1.00 14.02 O
ATOM 25 O5' A A 518 -107.873 7.443 -41.003 1.00 14.02 O
TER
ATOM 1 O3' C B 526 -107.256 23.387 -39.253 1.00 10.59 O
ATOM 2 P G B 527 -108.145 23.222 -37.925 1.00 26.01 P
ATOM 3 OP1 G B 527 -109.164 24.310 -37.941 1.00 26.01 O
ATOM 4 OP2 G B 527 -107.215 23.127 -36.777 1.00 26.01 O
ATOM 5 O5' G B 527 -108.846 21.818 -38.163 1.00 26.01 O
ATOM 6 C5' G B 527 -109.311 21.470 -39.455 1.00 26.01 C
ATOM 7 C4' G B 527 -109.453 19.978 -39.626 1.00 26.01 C
ATOM 8 O4' G B 527 -108.156 19.350 -39.800 1.00 26.01 O
ATOM 9 C3' G B 527 -110.048 19.207 -38.467 1.00 26.01 C
ATOM 10 O3' G B 527 -111.442 19.421 -38.304 1.00 26.01 O
ATOM 11 C2' G B 527 -109.663 17.780 -38.840 1.00 26.01 C
ATOM 12 O2' G B 527 -110.472 17.287 -39.898 1.00 26.01 O
ATOM 13 C1' G B 527 -108.243 18.000 -39.376 1.00 26.01 C
ATOM 14 N9 G B 527 -107.229 17.756 -38.336 1.00 26.09 N
ATOM 15 C8 G B 527 -106.569 18.639 -37.512 1.00 26.09 C
ATOM 16 N7 G B 527 -105.758 18.030 -36.676 1.00 26.09 N
ATOM 17 C5 G B 527 -105.903 16.677 -36.965 1.00 26.09 C
ATOM 18 C6 G B 527 -105.299 15.519 -36.410 1.00 26.09 C
ATOM 19 O6 G B 527 -104.462 15.440 -35.501 1.00 26.09 O
ATOM 20 N1 G B 527 -105.750 14.351 -37.010 1.00 26.09 N
ATOM 21 C2 G B 527 -106.659 14.280 -38.019 1.00 26.09 C
ATOM 22 N2 G B 527 -106.964 13.053 -38.466 1.00 26.09 N
ATOM 23 N3 G B 527 -107.226 15.343 -38.547 1.00 26.09 N
ATOM 24 C4 G B 527 -106.806 16.496 -37.982 1.00 26.09 C
ATOM 25 P G B 528 -111.972 20.351 -37.103 1.00 26.91 P
ATOM 26 OP1 G B 528 -112.650 21.535 -37.698 1.00 26.91 O
ATOM 27 OP2 G B 528 -110.833 20.581 -36.198 1.00 26.91 O
ATOM 28 O5' G B 528 -113.035 19.403 -36.407 1.00 26.91 O
TER
Atoms:
C2: (-111.938,11.596,-41.075)
OP1: (-110.270,10.278,-32.718)
OP2: (-108.050,9.595,-33.783)
C4: (-111.411,13.847,-41.100)
O5': (-110.053,10.030,-35.236)
C3': (-109.583,8.747,-38.796)
C1': (-111.508,10.132,-39.148)
O4': (-111.102,10.224,-37.800)
C5': (-109.334,9.474,-36.338)
P: (-109.312,10.359,-33.858)
O2: (-112.402,10.575,-41.602)
C4': (-110.254,9.102,-37.475)
C2': (-110.641,9.071,-39.846)
O2': (-111.431,7.929,-40.121)
N1: (-111.416,11.475,-39.786)
N3: (-111.914,12.787,-41.718)
N4: (-111.403,15.002,-41.770)
C6: (-110.911,12.576,-39.151)
C5: (-110.886,13.763,-39.775)
O3': (-109.163,7.402,-38.850)
OP1: (-110.270,10.278,-32.718)
OP2: (-108.050,9.595,-33.783)
C4: (-111.411,13.847,-41.100)
O5': (-110.053,10.030,-35.236)
C3': (-109.583,8.747,-38.796)
C1': (-111.508,10.132,-39.148)
O4': (-111.102,10.224,-37.800)
C5': (-109.334,9.474,-36.338)
P: (-109.312,10.359,-33.858)
O2: (-112.402,10.575,-41.602)
C4': (-110.254,9.102,-37.475)
C2': (-110.641,9.071,-39.846)
O2': (-111.431,7.929,-40.121)
N1: (-111.416,11.475,-39.786)
N3: (-111.914,12.787,-41.718)
N4: (-111.403,15.002,-41.770)
C6: (-110.911,12.576,-39.151)
C5: (-110.886,13.763,-39.775)
O3': (-109.163,7.402,-38.850)
OP1: (-109.164,24.310,-37.941)
OP2: (-107.215,23.127,-36.777)
C3': (-110.048,19.207,-38.467)
C1': (-108.243,18.000,-39.376)
C5': (-109.311,21.470,-39.455)
O6: (-104.462,15.440,-35.501)
O4': (-108.156,19.350,-39.800)
C8: (-106.569,18.639,-37.512)
C2: (-106.659,14.280,-38.019)
C6: (-105.299,15.519,-36.410)
C5: (-105.903,16.677,-36.965)
C4: (-106.806,16.496,-37.982)
P: (-108.145,23.222,-37.925)
C4': (-109.453,19.978,-39.626)
C2': (-109.663,17.780,-38.840)
O2': (-110.472,17.287,-39.898)
N1: (-105.750,14.351,-37.010)
N2: (-106.964,13.053,-38.466)
N3: (-107.226,15.343,-38.547)
N7: (-105.758,18.030,-36.676)
N9: (-107.229,17.756,-38.336)
O5': (-108.846,21.818,-38.163)
O3': (-111.442,19.421,-38.304)
OP2: (-107.215,23.127,-36.777)
C3': (-110.048,19.207,-38.467)
C1': (-108.243,18.000,-39.376)
C5': (-109.311,21.470,-39.455)
O6: (-104.462,15.440,-35.501)
O4': (-108.156,19.350,-39.800)
C8: (-106.569,18.639,-37.512)
C2: (-106.659,14.280,-38.019)
C6: (-105.299,15.519,-36.410)
C5: (-105.903,16.677,-36.965)
C4: (-106.806,16.496,-37.982)
P: (-108.145,23.222,-37.925)
C4': (-109.453,19.978,-39.626)
C2': (-109.663,17.780,-38.840)
O2': (-110.472,17.287,-39.898)
N1: (-105.750,14.351,-37.010)
N2: (-106.964,13.053,-38.466)
N3: (-107.226,15.343,-38.547)
N7: (-105.758,18.030,-36.676)
N9: (-107.229,17.756,-38.336)
O5': (-108.846,21.818,-38.163)
O3': (-111.442,19.421,-38.304)
Image (generated by PyMOL):