Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2056:A2054
Extra
PDB:
ATOM 1 O3' A A2055 -74.133 -52.079 11.889 1.00 2.66 O
ATOM 2 P C A2056 -75.551 -51.702 12.501 1.00 0.01 P
ATOM 3 OP1 C A2056 -75.376 -50.469 13.279 1.00 0.01 O
ATOM 4 OP2 C A2056 -76.085 -52.926 13.185 1.00 0.01 O
ATOM 5 O5' C A2056 -76.384 -51.384 11.201 1.00 0.01 O
ATOM 6 C5' C A2056 -75.843 -50.572 10.170 1.00 0.01 C
ATOM 7 C4' C A2056 -76.705 -50.646 8.952 1.00 0.01 C
ATOM 8 O4' C A2056 -76.347 -51.820 8.199 1.00 0.01 O
ATOM 9 C3' C A2056 -78.189 -50.802 9.235 1.00 0.01 C
ATOM 10 O3' C A2056 -78.827 -49.575 9.397 1.00 0.01 O
ATOM 11 C2' C A2056 -78.704 -51.573 8.051 1.00 0.01 C
ATOM 12 O2' C A2056 -78.969 -50.691 6.974 1.00 0.01 O
ATOM 13 C1' C A2056 -77.500 -52.440 7.686 1.00 0.01 C
ATOM 14 N1 C A2056 -77.583 -53.836 8.222 1.00 0.01 N
ATOM 15 C2 C A2056 -78.507 -54.732 7.685 1.00 0.01 C
ATOM 16 O2 C A2056 -79.289 -54.353 6.797 1.00 0.01 O
ATOM 17 N3 C A2056 -78.557 -55.997 8.159 1.00 0.01 N
ATOM 18 C4 C A2056 -77.740 -56.408 9.099 1.00 0.01 C
ATOM 19 N4 C A2056 -77.854 -57.665 9.503 1.00 0.01 N
ATOM 20 C5 C A2056 -76.789 -55.530 9.653 1.00 0.01 C
ATOM 21 C6 C A2056 -76.731 -54.282 9.183 1.00 0.01 C
ATOM 22 P C A2057 -79.869 -49.391 10.571 1.00 0.01 P
ATOM 23 OP1 C A2057 -80.641 -48.154 10.287 1.00 0.01 O
ATOM 24 OP2 C A2057 -79.110 -49.494 11.838 1.00 0.01 O
ATOM 25 O5' C A2057 -80.804 -50.648 10.398 1.00 0.01 O
TER
ATOM 1 O3' A B2053 -71.395 -63.627 14.383 1.00 0.01 O
ATOM 2 P G B2054 -71.762 -62.090 14.176 1.00 0.01 P
ATOM 3 OP1 G B2054 -70.600 -61.459 13.562 1.00 0.01 O
ATOM 4 OP2 G B2054 -72.245 -61.570 15.441 1.00 0.01 O
ATOM 5 O5' G B2054 -72.940 -62.128 13.137 1.00 0.01 O
ATOM 6 C5' G B2054 -72.699 -61.836 11.760 1.00 0.01 C
ATOM 7 C4' G B2054 -72.496 -60.357 11.493 1.00 0.01 C
ATOM 8 O4' G B2054 -72.763 -60.102 10.093 1.00 0.01 O
ATOM 9 C3' G B2054 -73.414 -59.406 12.261 1.00 0.01 C
ATOM 10 O3' G B2054 -72.765 -58.145 12.431 1.00 0.01 O
ATOM 11 C2' G B2054 -74.562 -59.233 11.305 1.00 0.01 C
ATOM 12 O2' G B2054 -75.333 -58.081 11.541 1.00 0.01 O
ATOM 13 C1' G B2054 -73.817 -59.170 9.971 1.00 0.01 C
ATOM 14 N9 G B2054 -74.643 -59.535 8.811 1.00 0.01 N
ATOM 15 C8 G B2054 -75.080 -60.780 8.547 1.00 0.01 C
ATOM 16 N7 G B2054 -75.830 -60.822 7.507 1.00 0.01 N
ATOM 17 C5 G B2054 -75.920 -59.550 7.056 1.00 0.01 C
ATOM 18 C6 G B2054 -76.640 -59.049 5.959 1.00 0.01 C
ATOM 19 O6 G B2054 -77.338 -59.683 5.163 1.00 0.01 O
ATOM 20 N1 G B2054 -76.492 -57.674 5.832 1.00 0.01 N
ATOM 21 C2 G B2054 -75.746 -56.911 6.681 1.00 0.01 C
ATOM 22 N2 G B2054 -75.699 -55.608 6.416 1.00 0.01 N
ATOM 23 N3 G B2054 -75.076 -57.400 7.703 1.00 0.01 N
ATOM 24 C4 G B2054 -75.204 -58.727 7.846 1.00 0.01 C
ATOM 25 P A B2055 -73.182 -57.168 13.618 1.00 2.66 P
ATOM 26 OP1 A B2055 -72.237 -57.370 14.694 1.00 2.66 O
ATOM 27 OP2 A B2055 -74.605 -57.369 13.878 1.00 2.66 O
ATOM 28 O5' A B2055 -72.957 -55.762 12.989 1.00 2.66 O
TER
ATOM 2 P C A2056 -75.551 -51.702 12.501 1.00 0.01 P
ATOM 3 OP1 C A2056 -75.376 -50.469 13.279 1.00 0.01 O
ATOM 4 OP2 C A2056 -76.085 -52.926 13.185 1.00 0.01 O
ATOM 5 O5' C A2056 -76.384 -51.384 11.201 1.00 0.01 O
ATOM 6 C5' C A2056 -75.843 -50.572 10.170 1.00 0.01 C
ATOM 7 C4' C A2056 -76.705 -50.646 8.952 1.00 0.01 C
ATOM 8 O4' C A2056 -76.347 -51.820 8.199 1.00 0.01 O
ATOM 9 C3' C A2056 -78.189 -50.802 9.235 1.00 0.01 C
ATOM 10 O3' C A2056 -78.827 -49.575 9.397 1.00 0.01 O
ATOM 11 C2' C A2056 -78.704 -51.573 8.051 1.00 0.01 C
ATOM 12 O2' C A2056 -78.969 -50.691 6.974 1.00 0.01 O
ATOM 13 C1' C A2056 -77.500 -52.440 7.686 1.00 0.01 C
ATOM 14 N1 C A2056 -77.583 -53.836 8.222 1.00 0.01 N
ATOM 15 C2 C A2056 -78.507 -54.732 7.685 1.00 0.01 C
ATOM 16 O2 C A2056 -79.289 -54.353 6.797 1.00 0.01 O
ATOM 17 N3 C A2056 -78.557 -55.997 8.159 1.00 0.01 N
ATOM 18 C4 C A2056 -77.740 -56.408 9.099 1.00 0.01 C
ATOM 19 N4 C A2056 -77.854 -57.665 9.503 1.00 0.01 N
ATOM 20 C5 C A2056 -76.789 -55.530 9.653 1.00 0.01 C
ATOM 21 C6 C A2056 -76.731 -54.282 9.183 1.00 0.01 C
ATOM 22 P C A2057 -79.869 -49.391 10.571 1.00 0.01 P
ATOM 23 OP1 C A2057 -80.641 -48.154 10.287 1.00 0.01 O
ATOM 24 OP2 C A2057 -79.110 -49.494 11.838 1.00 0.01 O
ATOM 25 O5' C A2057 -80.804 -50.648 10.398 1.00 0.01 O
TER
ATOM 1 O3' A B2053 -71.395 -63.627 14.383 1.00 0.01 O
ATOM 2 P G B2054 -71.762 -62.090 14.176 1.00 0.01 P
ATOM 3 OP1 G B2054 -70.600 -61.459 13.562 1.00 0.01 O
ATOM 4 OP2 G B2054 -72.245 -61.570 15.441 1.00 0.01 O
ATOM 5 O5' G B2054 -72.940 -62.128 13.137 1.00 0.01 O
ATOM 6 C5' G B2054 -72.699 -61.836 11.760 1.00 0.01 C
ATOM 7 C4' G B2054 -72.496 -60.357 11.493 1.00 0.01 C
ATOM 8 O4' G B2054 -72.763 -60.102 10.093 1.00 0.01 O
ATOM 9 C3' G B2054 -73.414 -59.406 12.261 1.00 0.01 C
ATOM 10 O3' G B2054 -72.765 -58.145 12.431 1.00 0.01 O
ATOM 11 C2' G B2054 -74.562 -59.233 11.305 1.00 0.01 C
ATOM 12 O2' G B2054 -75.333 -58.081 11.541 1.00 0.01 O
ATOM 13 C1' G B2054 -73.817 -59.170 9.971 1.00 0.01 C
ATOM 14 N9 G B2054 -74.643 -59.535 8.811 1.00 0.01 N
ATOM 15 C8 G B2054 -75.080 -60.780 8.547 1.00 0.01 C
ATOM 16 N7 G B2054 -75.830 -60.822 7.507 1.00 0.01 N
ATOM 17 C5 G B2054 -75.920 -59.550 7.056 1.00 0.01 C
ATOM 18 C6 G B2054 -76.640 -59.049 5.959 1.00 0.01 C
ATOM 19 O6 G B2054 -77.338 -59.683 5.163 1.00 0.01 O
ATOM 20 N1 G B2054 -76.492 -57.674 5.832 1.00 0.01 N
ATOM 21 C2 G B2054 -75.746 -56.911 6.681 1.00 0.01 C
ATOM 22 N2 G B2054 -75.699 -55.608 6.416 1.00 0.01 N
ATOM 23 N3 G B2054 -75.076 -57.400 7.703 1.00 0.01 N
ATOM 24 C4 G B2054 -75.204 -58.727 7.846 1.00 0.01 C
ATOM 25 P A B2055 -73.182 -57.168 13.618 1.00 2.66 P
ATOM 26 OP1 A B2055 -72.237 -57.370 14.694 1.00 2.66 O
ATOM 27 OP2 A B2055 -74.605 -57.369 13.878 1.00 2.66 O
ATOM 28 O5' A B2055 -72.957 -55.762 12.989 1.00 2.66 O
TER
Atoms:
C2: (-78.507,-54.732,7.685)
OP1: (-75.376,-50.469,13.279)
OP2: (-76.085,-52.926,13.185)
C4: (-77.740,-56.408,9.099)
O5': (-76.384,-51.384,11.201)
C3': (-78.189,-50.802,9.235)
C1': (-77.500,-52.440,7.686)
O4': (-76.347,-51.820,8.199)
C5': (-75.843,-50.572,10.170)
P: (-75.551,-51.702,12.501)
O2: (-79.289,-54.353,6.797)
C4': (-76.705,-50.646,8.952)
C2': (-78.704,-51.573,8.051)
O2': (-78.969,-50.691,6.974)
N1: (-77.583,-53.836,8.222)
N3: (-78.557,-55.997,8.159)
N4: (-77.854,-57.665,9.503)
C6: (-76.731,-54.282,9.183)
C5: (-76.789,-55.530,9.653)
O3': (-78.827,-49.575,9.397)
OP1: (-75.376,-50.469,13.279)
OP2: (-76.085,-52.926,13.185)
C4: (-77.740,-56.408,9.099)
O5': (-76.384,-51.384,11.201)
C3': (-78.189,-50.802,9.235)
C1': (-77.500,-52.440,7.686)
O4': (-76.347,-51.820,8.199)
C5': (-75.843,-50.572,10.170)
P: (-75.551,-51.702,12.501)
O2: (-79.289,-54.353,6.797)
C4': (-76.705,-50.646,8.952)
C2': (-78.704,-51.573,8.051)
O2': (-78.969,-50.691,6.974)
N1: (-77.583,-53.836,8.222)
N3: (-78.557,-55.997,8.159)
N4: (-77.854,-57.665,9.503)
C6: (-76.731,-54.282,9.183)
C5: (-76.789,-55.530,9.653)
O3': (-78.827,-49.575,9.397)
OP1: (-70.600,-61.459,13.562)
OP2: (-72.245,-61.570,15.441)
C3': (-73.414,-59.406,12.261)
C1': (-73.817,-59.170,9.971)
C5': (-72.699,-61.836,11.760)
O6: (-77.338,-59.683,5.163)
O4': (-72.763,-60.102,10.093)
C8: (-75.080,-60.780,8.547)
C2: (-75.746,-56.911,6.681)
C6: (-76.640,-59.049,5.959)
C5: (-75.920,-59.550,7.056)
C4: (-75.204,-58.727,7.846)
P: (-71.762,-62.090,14.176)
C4': (-72.496,-60.357,11.493)
C2': (-74.562,-59.233,11.305)
O2': (-75.333,-58.081,11.541)
N1: (-76.492,-57.674,5.832)
N2: (-75.699,-55.608,6.416)
N3: (-75.076,-57.400,7.703)
N7: (-75.830,-60.822,7.507)
N9: (-74.643,-59.535,8.811)
O5': (-72.940,-62.128,13.137)
O3': (-72.765,-58.145,12.431)
OP2: (-72.245,-61.570,15.441)
C3': (-73.414,-59.406,12.261)
C1': (-73.817,-59.170,9.971)
C5': (-72.699,-61.836,11.760)
O6: (-77.338,-59.683,5.163)
O4': (-72.763,-60.102,10.093)
C8: (-75.080,-60.780,8.547)
C2: (-75.746,-56.911,6.681)
C6: (-76.640,-59.049,5.959)
C5: (-75.920,-59.550,7.056)
C4: (-75.204,-58.727,7.846)
P: (-71.762,-62.090,14.176)
C4': (-72.496,-60.357,11.493)
C2': (-74.562,-59.233,11.305)
O2': (-75.333,-58.081,11.541)
N1: (-76.492,-57.674,5.832)
N2: (-75.699,-55.608,6.416)
N3: (-75.076,-57.400,7.703)
N7: (-75.830,-60.822,7.507)
N9: (-74.643,-59.535,8.811)
O5': (-72.940,-62.128,13.137)
O3': (-72.765,-58.145,12.431)
Image (generated by PyMOL):