Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2417:A2384
Extra
PDB:
ATOM 1 O3' U A2416 -104.817 -39.430 33.370 1.00 15.95 O
ATOM 2 P C A2417 -103.561 -40.091 34.064 1.00 0.01 P
ATOM 3 OP1 C A2417 -103.278 -39.292 35.298 1.00 0.01 O
ATOM 4 OP2 C A2417 -102.514 -40.210 33.016 1.00 0.01 O
ATOM 5 O5' C A2417 -104.100 -41.547 34.455 1.00 0.01 O
ATOM 6 C5' C A2417 -104.132 -41.994 35.806 1.00 0.01 C
ATOM 7 C4' C A2417 -102.947 -42.867 36.154 1.00 0.01 C
ATOM 8 O4' C A2417 -102.858 -42.970 37.594 1.00 0.01 O
ATOM 9 C3' C A2417 -103.005 -44.306 35.671 1.00 0.01 C
ATOM 10 O3' C A2417 -102.525 -44.461 34.359 1.00 0.01 O
ATOM 11 C2' C A2417 -102.181 -45.048 36.714 1.00 0.01 C
ATOM 12 O2' C A2417 -100.786 -44.921 36.470 1.00 0.01 O
ATOM 13 C1' C A2417 -102.528 -44.274 37.981 1.00 0.01 C
ATOM 14 N1 C A2417 -103.687 -44.847 38.678 1.00 0.01 N
ATOM 15 C2 C A2417 -103.516 -45.853 39.591 1.00 0.01 C
ATOM 16 O2 C A2417 -102.400 -46.255 39.852 1.00 0.01 O
ATOM 17 N3 C A2417 -104.574 -46.383 40.204 1.00 0.01 N
ATOM 18 C4 C A2417 -105.804 -45.956 39.951 1.00 0.01 C
ATOM 19 N4 C A2417 -106.826 -46.541 40.603 1.00 0.01 N
ATOM 20 C5 C A2417 -106.005 -44.920 39.004 1.00 0.01 C
ATOM 21 C6 C A2417 -104.931 -44.403 38.407 1.00 0.01 C
ATOM 22 P A A2418 -102.810 -45.804 33.533 1.00 0.01 P
ATOM 23 OP1 A A2418 -103.876 -46.527 34.225 1.00 0.01 O
ATOM 24 OP2 A A2418 -101.530 -46.450 33.345 1.00 0.01 O
ATOM 25 O5' A A2418 -103.332 -45.278 32.131 1.00 0.01 O
TER
ATOM 1 O3' U B2383 -115.621 -47.751 39.057 1.00 0.01 O
ATOM 2 P G B2384 -114.631 -47.329 40.228 1.00 0.01 P
ATOM 3 OP1 G B2384 -114.987 -48.155 41.404 1.00 0.01 O
ATOM 4 OP2 G B2384 -114.682 -45.848 40.353 1.00 0.01 O
ATOM 5 O5' G B2384 -113.214 -47.753 39.642 1.00 0.01 O
ATOM 6 C5' G B2384 -112.516 -48.880 40.149 1.00 0.01 C
ATOM 7 C4' G B2384 -111.056 -48.609 40.256 1.00 0.01 C
ATOM 8 O4' G B2384 -110.560 -48.240 38.932 1.00 0.01 O
ATOM 9 C3' G B2384 -110.691 -47.441 41.189 1.00 0.01 C
ATOM 10 O3' G B2384 -109.515 -47.727 41.954 1.00 0.01 O
ATOM 11 C2' G B2384 -110.364 -46.352 40.195 1.00 0.01 C
ATOM 12 O2' G B2384 -109.512 -45.346 40.670 1.00 0.01 O
ATOM 13 C1' G B2384 -109.707 -47.161 39.111 1.00 0.01 C
ATOM 14 N9 G B2384 -109.467 -46.415 37.876 1.00 0.01 N
ATOM 15 C8 G B2384 -110.130 -45.330 37.364 1.00 0.01 C
ATOM 16 N7 G B2384 -109.534 -44.768 36.343 1.00 0.01 N
ATOM 17 C5 G B2384 -108.360 -45.481 36.231 1.00 0.01 C
ATOM 18 C6 G B2384 -107.280 -45.358 35.336 1.00 0.01 C
ATOM 19 O6 G B2384 -107.112 -44.566 34.417 1.00 0.01 O
ATOM 20 N1 G B2384 -106.286 -46.284 35.550 1.00 0.01 N
ATOM 21 C2 G B2384 -106.309 -47.230 36.515 1.00 0.01 C
ATOM 22 N2 G B2384 -105.246 -48.043 36.554 1.00 0.01 N
ATOM 23 N3 G B2384 -107.303 -47.350 37.382 1.00 0.01 N
ATOM 24 C4 G B2384 -108.289 -46.455 37.183 1.00 0.01 C
ATOM 25 P A B2385 -109.594 -48.456 43.395 1.00 0.01 P
ATOM 26 OP1 A B2385 -110.964 -48.314 43.910 1.00 0.01 O
ATOM 27 OP2 A B2385 -108.471 -47.956 44.222 1.00 0.01 O
ATOM 28 O5' A B2385 -109.341 -49.941 43.001 1.00 0.01 O
TER
ATOM 2 P C A2417 -103.561 -40.091 34.064 1.00 0.01 P
ATOM 3 OP1 C A2417 -103.278 -39.292 35.298 1.00 0.01 O
ATOM 4 OP2 C A2417 -102.514 -40.210 33.016 1.00 0.01 O
ATOM 5 O5' C A2417 -104.100 -41.547 34.455 1.00 0.01 O
ATOM 6 C5' C A2417 -104.132 -41.994 35.806 1.00 0.01 C
ATOM 7 C4' C A2417 -102.947 -42.867 36.154 1.00 0.01 C
ATOM 8 O4' C A2417 -102.858 -42.970 37.594 1.00 0.01 O
ATOM 9 C3' C A2417 -103.005 -44.306 35.671 1.00 0.01 C
ATOM 10 O3' C A2417 -102.525 -44.461 34.359 1.00 0.01 O
ATOM 11 C2' C A2417 -102.181 -45.048 36.714 1.00 0.01 C
ATOM 12 O2' C A2417 -100.786 -44.921 36.470 1.00 0.01 O
ATOM 13 C1' C A2417 -102.528 -44.274 37.981 1.00 0.01 C
ATOM 14 N1 C A2417 -103.687 -44.847 38.678 1.00 0.01 N
ATOM 15 C2 C A2417 -103.516 -45.853 39.591 1.00 0.01 C
ATOM 16 O2 C A2417 -102.400 -46.255 39.852 1.00 0.01 O
ATOM 17 N3 C A2417 -104.574 -46.383 40.204 1.00 0.01 N
ATOM 18 C4 C A2417 -105.804 -45.956 39.951 1.00 0.01 C
ATOM 19 N4 C A2417 -106.826 -46.541 40.603 1.00 0.01 N
ATOM 20 C5 C A2417 -106.005 -44.920 39.004 1.00 0.01 C
ATOM 21 C6 C A2417 -104.931 -44.403 38.407 1.00 0.01 C
ATOM 22 P A A2418 -102.810 -45.804 33.533 1.00 0.01 P
ATOM 23 OP1 A A2418 -103.876 -46.527 34.225 1.00 0.01 O
ATOM 24 OP2 A A2418 -101.530 -46.450 33.345 1.00 0.01 O
ATOM 25 O5' A A2418 -103.332 -45.278 32.131 1.00 0.01 O
TER
ATOM 1 O3' U B2383 -115.621 -47.751 39.057 1.00 0.01 O
ATOM 2 P G B2384 -114.631 -47.329 40.228 1.00 0.01 P
ATOM 3 OP1 G B2384 -114.987 -48.155 41.404 1.00 0.01 O
ATOM 4 OP2 G B2384 -114.682 -45.848 40.353 1.00 0.01 O
ATOM 5 O5' G B2384 -113.214 -47.753 39.642 1.00 0.01 O
ATOM 6 C5' G B2384 -112.516 -48.880 40.149 1.00 0.01 C
ATOM 7 C4' G B2384 -111.056 -48.609 40.256 1.00 0.01 C
ATOM 8 O4' G B2384 -110.560 -48.240 38.932 1.00 0.01 O
ATOM 9 C3' G B2384 -110.691 -47.441 41.189 1.00 0.01 C
ATOM 10 O3' G B2384 -109.515 -47.727 41.954 1.00 0.01 O
ATOM 11 C2' G B2384 -110.364 -46.352 40.195 1.00 0.01 C
ATOM 12 O2' G B2384 -109.512 -45.346 40.670 1.00 0.01 O
ATOM 13 C1' G B2384 -109.707 -47.161 39.111 1.00 0.01 C
ATOM 14 N9 G B2384 -109.467 -46.415 37.876 1.00 0.01 N
ATOM 15 C8 G B2384 -110.130 -45.330 37.364 1.00 0.01 C
ATOM 16 N7 G B2384 -109.534 -44.768 36.343 1.00 0.01 N
ATOM 17 C5 G B2384 -108.360 -45.481 36.231 1.00 0.01 C
ATOM 18 C6 G B2384 -107.280 -45.358 35.336 1.00 0.01 C
ATOM 19 O6 G B2384 -107.112 -44.566 34.417 1.00 0.01 O
ATOM 20 N1 G B2384 -106.286 -46.284 35.550 1.00 0.01 N
ATOM 21 C2 G B2384 -106.309 -47.230 36.515 1.00 0.01 C
ATOM 22 N2 G B2384 -105.246 -48.043 36.554 1.00 0.01 N
ATOM 23 N3 G B2384 -107.303 -47.350 37.382 1.00 0.01 N
ATOM 24 C4 G B2384 -108.289 -46.455 37.183 1.00 0.01 C
ATOM 25 P A B2385 -109.594 -48.456 43.395 1.00 0.01 P
ATOM 26 OP1 A B2385 -110.964 -48.314 43.910 1.00 0.01 O
ATOM 27 OP2 A B2385 -108.471 -47.956 44.222 1.00 0.01 O
ATOM 28 O5' A B2385 -109.341 -49.941 43.001 1.00 0.01 O
TER
Atoms:
C2: (-103.516,-45.853,39.591)
OP1: (-103.278,-39.292,35.298)
OP2: (-102.514,-40.210,33.016)
C4: (-105.804,-45.956,39.951)
O5': (-104.100,-41.547,34.455)
C3': (-103.005,-44.306,35.671)
C1': (-102.528,-44.274,37.981)
O4': (-102.858,-42.970,37.594)
C5': (-104.132,-41.994,35.806)
P: (-103.561,-40.091,34.064)
O2: (-102.400,-46.255,39.852)
C4': (-102.947,-42.867,36.154)
C2': (-102.181,-45.048,36.714)
O2': (-100.786,-44.921,36.470)
N1: (-103.687,-44.847,38.678)
N3: (-104.574,-46.383,40.204)
N4: (-106.826,-46.541,40.603)
C6: (-104.931,-44.403,38.407)
C5: (-106.005,-44.920,39.004)
O3': (-102.525,-44.461,34.359)
OP1: (-103.278,-39.292,35.298)
OP2: (-102.514,-40.210,33.016)
C4: (-105.804,-45.956,39.951)
O5': (-104.100,-41.547,34.455)
C3': (-103.005,-44.306,35.671)
C1': (-102.528,-44.274,37.981)
O4': (-102.858,-42.970,37.594)
C5': (-104.132,-41.994,35.806)
P: (-103.561,-40.091,34.064)
O2: (-102.400,-46.255,39.852)
C4': (-102.947,-42.867,36.154)
C2': (-102.181,-45.048,36.714)
O2': (-100.786,-44.921,36.470)
N1: (-103.687,-44.847,38.678)
N3: (-104.574,-46.383,40.204)
N4: (-106.826,-46.541,40.603)
C6: (-104.931,-44.403,38.407)
C5: (-106.005,-44.920,39.004)
O3': (-102.525,-44.461,34.359)
OP1: (-114.987,-48.155,41.404)
OP2: (-114.682,-45.848,40.353)
C3': (-110.691,-47.441,41.189)
C1': (-109.707,-47.161,39.111)
C5': (-112.516,-48.880,40.149)
O6: (-107.112,-44.566,34.417)
O4': (-110.560,-48.240,38.932)
C8: (-110.130,-45.330,37.364)
C2: (-106.309,-47.230,36.515)
C6: (-107.280,-45.358,35.336)
C5: (-108.360,-45.481,36.231)
C4: (-108.289,-46.455,37.183)
P: (-114.631,-47.329,40.228)
C4': (-111.056,-48.609,40.256)
C2': (-110.364,-46.352,40.195)
O2': (-109.512,-45.346,40.670)
N1: (-106.286,-46.284,35.550)
N2: (-105.246,-48.043,36.554)
N3: (-107.303,-47.350,37.382)
N7: (-109.534,-44.768,36.343)
N9: (-109.467,-46.415,37.876)
O5': (-113.214,-47.753,39.642)
O3': (-109.515,-47.727,41.954)
OP2: (-114.682,-45.848,40.353)
C3': (-110.691,-47.441,41.189)
C1': (-109.707,-47.161,39.111)
C5': (-112.516,-48.880,40.149)
O6: (-107.112,-44.566,34.417)
O4': (-110.560,-48.240,38.932)
C8: (-110.130,-45.330,37.364)
C2: (-106.309,-47.230,36.515)
C6: (-107.280,-45.358,35.336)
C5: (-108.360,-45.481,36.231)
C4: (-108.289,-46.455,37.183)
P: (-114.631,-47.329,40.228)
C4': (-111.056,-48.609,40.256)
C2': (-110.364,-46.352,40.195)
O2': (-109.512,-45.346,40.670)
N1: (-106.286,-46.284,35.550)
N2: (-105.246,-48.043,36.554)
N3: (-107.303,-47.350,37.382)
N7: (-109.534,-44.768,36.343)
N9: (-109.467,-46.415,37.876)
O5': (-113.214,-47.753,39.642)
O3': (-109.515,-47.727,41.954)
Image (generated by PyMOL):