Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2572:A2569
Extra
PDB:
ATOM 1 O3' G A2571 -60.972 -61.253 -9.954 1.00 0.01 O
ATOM 2 P C A2572 -61.223 -59.775 -9.428 1.00 0.01 P
ATOM 3 OP1 C A2572 -60.299 -59.543 -8.328 1.00 0.01 O
ATOM 4 OP2 C A2572 -62.632 -59.640 -9.168 1.00 0.01 O
ATOM 5 O5' C A2572 -60.834 -58.898 -10.679 1.00 0.01 O
ATOM 6 C5' C A2572 -59.514 -58.443 -10.885 1.00 0.01 C
ATOM 7 C4' C A2572 -59.496 -57.330 -11.879 1.00 0.01 C
ATOM 8 O4' C A2572 -60.346 -57.692 -12.984 1.00 0.01 O
ATOM 9 C3' C A2572 -60.077 -56.034 -11.387 1.00 0.01 C
ATOM 10 O3' C A2572 -59.176 -55.270 -10.642 1.00 0.01 O
ATOM 11 C2' C A2572 -60.588 -55.373 -12.657 1.00 0.01 C
ATOM 12 O2' C A2572 -59.546 -54.794 -13.423 1.00 0.01 O
ATOM 13 C1' C A2572 -61.116 -56.586 -13.397 1.00 0.01 C
ATOM 14 N1 C A2572 -62.538 -56.852 -13.063 1.00 0.01 N
ATOM 15 C2 C A2572 -63.495 -56.076 -13.651 1.00 0.01 C
ATOM 16 O2 C A2572 -63.183 -55.211 -14.443 1.00 0.01 O
ATOM 17 N3 C A2572 -64.760 -56.241 -13.352 1.00 0.01 N
ATOM 18 C4 C A2572 -65.126 -57.152 -12.507 1.00 0.01 C
ATOM 19 N4 C A2572 -66.448 -57.256 -12.285 1.00 0.01 N
ATOM 20 C5 C A2572 -64.171 -57.963 -11.870 1.00 0.01 C
ATOM 21 C6 C A2572 -62.907 -57.779 -12.170 1.00 0.01 C
ATOM 22 P U A2573 -59.692 -54.500 -9.353 1.00 0.01 P
ATOM 23 OP1 U A2573 -58.528 -54.064 -8.603 1.00 0.01 O
ATOM 24 OP2 U A2573 -60.676 -55.365 -8.688 1.00 0.01 O
ATOM 25 O5' U A2573 -60.413 -53.262 -9.989 1.00 0.01 O
TER
ATOM 1 O3' C B2568 -69.289 -62.378 -11.625 1.00 0.01 O
ATOM 2 P G B2569 -69.579 -61.693 -10.219 1.00 0.01 P
ATOM 3 OP1 G B2569 -69.374 -62.747 -9.192 1.00 0.01 O
ATOM 4 OP2 G B2569 -70.877 -61.049 -10.310 1.00 0.01 O
ATOM 5 O5' G B2569 -68.466 -60.583 -10.119 1.00 0.01 O
ATOM 6 C5' G B2569 -67.214 -60.754 -10.732 1.00 0.01 C
ATOM 7 C4' G B2569 -66.123 -60.362 -9.801 1.00 0.01 C
ATOM 8 O4' G B2569 -66.252 -58.981 -9.521 1.00 0.01 O
ATOM 9 C3' G B2569 -66.159 -61.033 -8.449 1.00 0.01 C
ATOM 10 O3' G B2569 -65.450 -62.244 -8.441 1.00 0.01 O
ATOM 11 C2' G B2569 -65.581 -60.002 -7.496 1.00 0.01 C
ATOM 12 O2' G B2569 -64.192 -60.191 -7.331 1.00 0.01 O
ATOM 13 C1' G B2569 -65.814 -58.694 -8.227 1.00 0.01 C
ATOM 14 N9 G B2569 -66.820 -57.855 -7.572 1.00 0.02 N
ATOM 15 C8 G B2569 -66.683 -56.530 -7.279 1.00 0.02 C
ATOM 16 N7 G B2569 -67.736 -56.016 -6.701 1.00 0.02 N
ATOM 17 C5 G B2569 -68.610 -57.075 -6.637 1.00 0.02 C
ATOM 18 C6 G B2569 -69.899 -57.112 -6.118 1.00 0.02 C
ATOM 19 O6 G B2569 -70.564 -56.212 -5.584 1.00 0.02 O
ATOM 20 N1 G B2569 -70.408 -58.375 -6.271 1.00 0.02 N
ATOM 21 C2 G B2569 -69.762 -59.439 -6.819 1.00 0.02 C
ATOM 22 N2 G B2569 -70.433 -60.597 -6.844 1.00 0.02 N
ATOM 23 N3 G B2569 -68.559 -59.400 -7.303 1.00 0.02 N
ATOM 24 C4 G B2569 -68.061 -58.198 -7.173 1.00 0.02 C
ATOM 25 P A B2570 -65.769 -63.344 -7.359 1.00 0.01 P
ATOM 26 OP1 A B2570 -66.814 -64.215 -7.929 1.00 0.01 O
ATOM 27 OP2 A B2570 -66.031 -62.641 -6.113 1.00 0.01 O
ATOM 28 O5' A B2570 -64.398 -64.118 -7.240 1.00 0.01 O
TER
ATOM 2 P C A2572 -61.223 -59.775 -9.428 1.00 0.01 P
ATOM 3 OP1 C A2572 -60.299 -59.543 -8.328 1.00 0.01 O
ATOM 4 OP2 C A2572 -62.632 -59.640 -9.168 1.00 0.01 O
ATOM 5 O5' C A2572 -60.834 -58.898 -10.679 1.00 0.01 O
ATOM 6 C5' C A2572 -59.514 -58.443 -10.885 1.00 0.01 C
ATOM 7 C4' C A2572 -59.496 -57.330 -11.879 1.00 0.01 C
ATOM 8 O4' C A2572 -60.346 -57.692 -12.984 1.00 0.01 O
ATOM 9 C3' C A2572 -60.077 -56.034 -11.387 1.00 0.01 C
ATOM 10 O3' C A2572 -59.176 -55.270 -10.642 1.00 0.01 O
ATOM 11 C2' C A2572 -60.588 -55.373 -12.657 1.00 0.01 C
ATOM 12 O2' C A2572 -59.546 -54.794 -13.423 1.00 0.01 O
ATOM 13 C1' C A2572 -61.116 -56.586 -13.397 1.00 0.01 C
ATOM 14 N1 C A2572 -62.538 -56.852 -13.063 1.00 0.01 N
ATOM 15 C2 C A2572 -63.495 -56.076 -13.651 1.00 0.01 C
ATOM 16 O2 C A2572 -63.183 -55.211 -14.443 1.00 0.01 O
ATOM 17 N3 C A2572 -64.760 -56.241 -13.352 1.00 0.01 N
ATOM 18 C4 C A2572 -65.126 -57.152 -12.507 1.00 0.01 C
ATOM 19 N4 C A2572 -66.448 -57.256 -12.285 1.00 0.01 N
ATOM 20 C5 C A2572 -64.171 -57.963 -11.870 1.00 0.01 C
ATOM 21 C6 C A2572 -62.907 -57.779 -12.170 1.00 0.01 C
ATOM 22 P U A2573 -59.692 -54.500 -9.353 1.00 0.01 P
ATOM 23 OP1 U A2573 -58.528 -54.064 -8.603 1.00 0.01 O
ATOM 24 OP2 U A2573 -60.676 -55.365 -8.688 1.00 0.01 O
ATOM 25 O5' U A2573 -60.413 -53.262 -9.989 1.00 0.01 O
TER
ATOM 1 O3' C B2568 -69.289 -62.378 -11.625 1.00 0.01 O
ATOM 2 P G B2569 -69.579 -61.693 -10.219 1.00 0.01 P
ATOM 3 OP1 G B2569 -69.374 -62.747 -9.192 1.00 0.01 O
ATOM 4 OP2 G B2569 -70.877 -61.049 -10.310 1.00 0.01 O
ATOM 5 O5' G B2569 -68.466 -60.583 -10.119 1.00 0.01 O
ATOM 6 C5' G B2569 -67.214 -60.754 -10.732 1.00 0.01 C
ATOM 7 C4' G B2569 -66.123 -60.362 -9.801 1.00 0.01 C
ATOM 8 O4' G B2569 -66.252 -58.981 -9.521 1.00 0.01 O
ATOM 9 C3' G B2569 -66.159 -61.033 -8.449 1.00 0.01 C
ATOM 10 O3' G B2569 -65.450 -62.244 -8.441 1.00 0.01 O
ATOM 11 C2' G B2569 -65.581 -60.002 -7.496 1.00 0.01 C
ATOM 12 O2' G B2569 -64.192 -60.191 -7.331 1.00 0.01 O
ATOM 13 C1' G B2569 -65.814 -58.694 -8.227 1.00 0.01 C
ATOM 14 N9 G B2569 -66.820 -57.855 -7.572 1.00 0.02 N
ATOM 15 C8 G B2569 -66.683 -56.530 -7.279 1.00 0.02 C
ATOM 16 N7 G B2569 -67.736 -56.016 -6.701 1.00 0.02 N
ATOM 17 C5 G B2569 -68.610 -57.075 -6.637 1.00 0.02 C
ATOM 18 C6 G B2569 -69.899 -57.112 -6.118 1.00 0.02 C
ATOM 19 O6 G B2569 -70.564 -56.212 -5.584 1.00 0.02 O
ATOM 20 N1 G B2569 -70.408 -58.375 -6.271 1.00 0.02 N
ATOM 21 C2 G B2569 -69.762 -59.439 -6.819 1.00 0.02 C
ATOM 22 N2 G B2569 -70.433 -60.597 -6.844 1.00 0.02 N
ATOM 23 N3 G B2569 -68.559 -59.400 -7.303 1.00 0.02 N
ATOM 24 C4 G B2569 -68.061 -58.198 -7.173 1.00 0.02 C
ATOM 25 P A B2570 -65.769 -63.344 -7.359 1.00 0.01 P
ATOM 26 OP1 A B2570 -66.814 -64.215 -7.929 1.00 0.01 O
ATOM 27 OP2 A B2570 -66.031 -62.641 -6.113 1.00 0.01 O
ATOM 28 O5' A B2570 -64.398 -64.118 -7.240 1.00 0.01 O
TER
Atoms:
C2: (-63.495,-56.076,-13.651)
OP1: (-60.299,-59.543,-8.328)
OP2: (-62.632,-59.640,-9.168)
C4: (-65.126,-57.152,-12.507)
O5': (-60.834,-58.898,-10.679)
C3': (-60.077,-56.034,-11.387)
C1': (-61.116,-56.586,-13.397)
O4': (-60.346,-57.692,-12.984)
C5': (-59.514,-58.443,-10.885)
P: (-61.223,-59.775,-9.428)
O2: (-63.183,-55.211,-14.443)
C4': (-59.496,-57.330,-11.879)
C2': (-60.588,-55.373,-12.657)
O2': (-59.546,-54.794,-13.423)
N1: (-62.538,-56.852,-13.063)
N3: (-64.760,-56.241,-13.352)
N4: (-66.448,-57.256,-12.285)
C6: (-62.907,-57.779,-12.170)
C5: (-64.171,-57.963,-11.870)
O3': (-59.176,-55.270,-10.642)
OP1: (-60.299,-59.543,-8.328)
OP2: (-62.632,-59.640,-9.168)
C4: (-65.126,-57.152,-12.507)
O5': (-60.834,-58.898,-10.679)
C3': (-60.077,-56.034,-11.387)
C1': (-61.116,-56.586,-13.397)
O4': (-60.346,-57.692,-12.984)
C5': (-59.514,-58.443,-10.885)
P: (-61.223,-59.775,-9.428)
O2: (-63.183,-55.211,-14.443)
C4': (-59.496,-57.330,-11.879)
C2': (-60.588,-55.373,-12.657)
O2': (-59.546,-54.794,-13.423)
N1: (-62.538,-56.852,-13.063)
N3: (-64.760,-56.241,-13.352)
N4: (-66.448,-57.256,-12.285)
C6: (-62.907,-57.779,-12.170)
C5: (-64.171,-57.963,-11.870)
O3': (-59.176,-55.270,-10.642)
OP1: (-69.374,-62.747,-9.192)
OP2: (-70.877,-61.049,-10.310)
C3': (-66.159,-61.033,-8.449)
C1': (-65.814,-58.694,-8.227)
C5': (-67.214,-60.754,-10.732)
O6: (-70.564,-56.212,-5.584)
O4': (-66.252,-58.981,-9.521)
C8: (-66.683,-56.530,-7.279)
C2: (-69.762,-59.439,-6.819)
C6: (-69.899,-57.112,-6.118)
C5: (-68.610,-57.075,-6.637)
C4: (-68.061,-58.198,-7.173)
P: (-69.579,-61.693,-10.219)
C4': (-66.123,-60.362,-9.801)
C2': (-65.581,-60.002,-7.496)
O2': (-64.192,-60.191,-7.331)
N1: (-70.408,-58.375,-6.271)
N2: (-70.433,-60.597,-6.844)
N3: (-68.559,-59.400,-7.303)
N7: (-67.736,-56.016,-6.701)
N9: (-66.820,-57.855,-7.572)
O5': (-68.466,-60.583,-10.119)
O3': (-65.450,-62.244,-8.441)
OP2: (-70.877,-61.049,-10.310)
C3': (-66.159,-61.033,-8.449)
C1': (-65.814,-58.694,-8.227)
C5': (-67.214,-60.754,-10.732)
O6: (-70.564,-56.212,-5.584)
O4': (-66.252,-58.981,-9.521)
C8: (-66.683,-56.530,-7.279)
C2: (-69.762,-59.439,-6.819)
C6: (-69.899,-57.112,-6.118)
C5: (-68.610,-57.075,-6.637)
C4: (-68.061,-58.198,-7.173)
P: (-69.579,-61.693,-10.219)
C4': (-66.123,-60.362,-9.801)
C2': (-65.581,-60.002,-7.496)
O2': (-64.192,-60.191,-7.331)
N1: (-70.408,-58.375,-6.271)
N2: (-70.433,-60.597,-6.844)
N3: (-68.559,-59.400,-7.303)
N7: (-67.736,-56.016,-6.701)
N9: (-66.820,-57.855,-7.572)
O5': (-68.466,-60.583,-10.119)
O3': (-65.450,-62.244,-8.441)
Image (generated by PyMOL):