Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01817:01828
Extra
PDB:
ATOM 1 O3' A A1816 115.030 121.094 57.253 1.00 45.85 O
ATOM 2 P A A1817 113.504 120.804 57.674 1.00 46.11 P
ATOM 3 OP1 A A1817 113.305 119.341 57.540 1.00 47.03 O
ATOM 4 OP2 A A1817 112.635 121.738 56.902 1.00 44.47 O
ATOM 5 O5' A A1817 113.442 121.163 59.227 1.00 41.06 O
ATOM 6 C5' A A1817 114.155 120.368 60.195 1.00 40.54 C
ATOM 7 C4' A A1817 114.097 121.018 61.554 1.00 40.40 C
ATOM 8 O4' A A1817 114.702 122.329 61.467 1.00 38.83 O
ATOM 9 C3' A A1817 112.694 121.283 62.076 1.00 40.84 C
ATOM 10 O3' A A1817 112.144 120.147 62.726 1.00 42.27 O
ATOM 11 C2' A A1817 112.901 122.470 63.004 1.00 39.15 C
ATOM 12 O2' A A1817 113.435 122.126 64.265 1.00 39.29 O
ATOM 13 C1' A A1817 113.943 123.264 62.221 1.00 38.38 C
ATOM 14 N9 A A1817 113.339 124.205 61.281 1.00 36.68 N
ATOM 15 C8 A A1817 113.169 124.039 59.928 1.00 36.30 C
ATOM 16 N7 A A1817 112.598 125.058 59.340 1.00 36.41 N
ATOM 17 C5 A A1817 112.377 125.957 60.373 1.00 34.73 C
ATOM 18 C6 A A1817 111.806 127.236 60.401 1.00 33.66 C
ATOM 19 N6 A A1817 111.353 127.870 59.321 1.00 32.19 N
ATOM 20 N1 A A1817 111.724 127.855 61.591 1.00 35.11 N
ATOM 21 C2 A A1817 112.201 127.231 62.672 1.00 36.94 C
ATOM 22 N3 A A1817 112.772 126.036 62.771 1.00 36.34 N
ATOM 23 C4 A A1817 112.826 125.442 61.573 1.00 35.21 C
ATOM 24 P U A1818 110.655 119.676 62.364 1.00 44.12 P
ATOM 25 OP1 U A1818 110.311 118.563 63.274 1.00 44.34 O
ATOM 26 OP2 U A1818 110.601 119.475 60.890 1.00 43.21 O
ATOM 27 O5' U A1818 109.751 120.922 62.766 1.00 43.00 O
TER
ATOM 1 O3' A B1827 105.010 136.069 57.852 1.00 37.92 O
ATOM 2 P C B1828 106.457 136.753 57.867 1.00 39.71 P
ATOM 3 OP1 C B1828 106.254 138.101 58.451 1.00 38.15 O
ATOM 4 OP2 C B1828 107.056 136.623 56.525 1.00 38.46 O
ATOM 5 O5' C B1828 107.293 135.851 58.883 1.00 39.08 O
ATOM 6 C5' C B1828 106.914 135.762 60.277 1.00 40.96 C
ATOM 7 C4' C B1828 107.701 134.673 60.975 1.00 41.46 C
ATOM 8 O4' C B1828 107.402 133.388 60.374 1.00 40.95 O
ATOM 9 C3' C B1828 109.211 134.778 60.861 1.00 42.20 C
ATOM 10 O3' C B1828 109.745 135.675 61.818 1.00 43.78 O
ATOM 11 C2' C B1828 109.664 133.346 61.095 1.00 40.09 C
ATOM 12 O2' C B1828 109.644 132.971 62.459 1.00 41.17 O
ATOM 13 C1' C B1828 108.567 132.579 60.369 1.00 37.01 C
ATOM 14 N1 C B1828 108.894 132.248 58.977 1.00 32.67 N
ATOM 15 C2 C B1828 109.630 131.093 58.726 1.00 31.07 C
ATOM 16 O2 C B1828 110.078 130.445 59.685 1.00 27.68 O
ATOM 17 N3 C B1828 109.850 130.717 57.447 1.00 31.02 N
ATOM 18 C4 C B1828 109.398 131.468 56.443 1.00 30.92 C
ATOM 19 N4 C B1828 109.632 131.048 55.200 1.00 29.99 N
ATOM 20 C5 C B1828 108.687 132.680 56.671 1.00 31.65 C
ATOM 21 C6 C B1828 108.461 133.030 57.942 1.00 31.80 C
ATOM 22 P U B1829 111.071 136.491 61.466 1.00 43.17 P
ATOM 23 OP1 U B1829 112.208 135.532 61.531 1.00 41.12 O
ATOM 24 OP2 U B1829 111.071 137.706 62.320 1.00 41.18 O
ATOM 25 O5' U B1829 110.846 136.905 59.947 1.00 40.85 O
TER
ATOM 2 P A A1817 113.504 120.804 57.674 1.00 46.11 P
ATOM 3 OP1 A A1817 113.305 119.341 57.540 1.00 47.03 O
ATOM 4 OP2 A A1817 112.635 121.738 56.902 1.00 44.47 O
ATOM 5 O5' A A1817 113.442 121.163 59.227 1.00 41.06 O
ATOM 6 C5' A A1817 114.155 120.368 60.195 1.00 40.54 C
ATOM 7 C4' A A1817 114.097 121.018 61.554 1.00 40.40 C
ATOM 8 O4' A A1817 114.702 122.329 61.467 1.00 38.83 O
ATOM 9 C3' A A1817 112.694 121.283 62.076 1.00 40.84 C
ATOM 10 O3' A A1817 112.144 120.147 62.726 1.00 42.27 O
ATOM 11 C2' A A1817 112.901 122.470 63.004 1.00 39.15 C
ATOM 12 O2' A A1817 113.435 122.126 64.265 1.00 39.29 O
ATOM 13 C1' A A1817 113.943 123.264 62.221 1.00 38.38 C
ATOM 14 N9 A A1817 113.339 124.205 61.281 1.00 36.68 N
ATOM 15 C8 A A1817 113.169 124.039 59.928 1.00 36.30 C
ATOM 16 N7 A A1817 112.598 125.058 59.340 1.00 36.41 N
ATOM 17 C5 A A1817 112.377 125.957 60.373 1.00 34.73 C
ATOM 18 C6 A A1817 111.806 127.236 60.401 1.00 33.66 C
ATOM 19 N6 A A1817 111.353 127.870 59.321 1.00 32.19 N
ATOM 20 N1 A A1817 111.724 127.855 61.591 1.00 35.11 N
ATOM 21 C2 A A1817 112.201 127.231 62.672 1.00 36.94 C
ATOM 22 N3 A A1817 112.772 126.036 62.771 1.00 36.34 N
ATOM 23 C4 A A1817 112.826 125.442 61.573 1.00 35.21 C
ATOM 24 P U A1818 110.655 119.676 62.364 1.00 44.12 P
ATOM 25 OP1 U A1818 110.311 118.563 63.274 1.00 44.34 O
ATOM 26 OP2 U A1818 110.601 119.475 60.890 1.00 43.21 O
ATOM 27 O5' U A1818 109.751 120.922 62.766 1.00 43.00 O
TER
ATOM 1 O3' A B1827 105.010 136.069 57.852 1.00 37.92 O
ATOM 2 P C B1828 106.457 136.753 57.867 1.00 39.71 P
ATOM 3 OP1 C B1828 106.254 138.101 58.451 1.00 38.15 O
ATOM 4 OP2 C B1828 107.056 136.623 56.525 1.00 38.46 O
ATOM 5 O5' C B1828 107.293 135.851 58.883 1.00 39.08 O
ATOM 6 C5' C B1828 106.914 135.762 60.277 1.00 40.96 C
ATOM 7 C4' C B1828 107.701 134.673 60.975 1.00 41.46 C
ATOM 8 O4' C B1828 107.402 133.388 60.374 1.00 40.95 O
ATOM 9 C3' C B1828 109.211 134.778 60.861 1.00 42.20 C
ATOM 10 O3' C B1828 109.745 135.675 61.818 1.00 43.78 O
ATOM 11 C2' C B1828 109.664 133.346 61.095 1.00 40.09 C
ATOM 12 O2' C B1828 109.644 132.971 62.459 1.00 41.17 O
ATOM 13 C1' C B1828 108.567 132.579 60.369 1.00 37.01 C
ATOM 14 N1 C B1828 108.894 132.248 58.977 1.00 32.67 N
ATOM 15 C2 C B1828 109.630 131.093 58.726 1.00 31.07 C
ATOM 16 O2 C B1828 110.078 130.445 59.685 1.00 27.68 O
ATOM 17 N3 C B1828 109.850 130.717 57.447 1.00 31.02 N
ATOM 18 C4 C B1828 109.398 131.468 56.443 1.00 30.92 C
ATOM 19 N4 C B1828 109.632 131.048 55.200 1.00 29.99 N
ATOM 20 C5 C B1828 108.687 132.680 56.671 1.00 31.65 C
ATOM 21 C6 C B1828 108.461 133.030 57.942 1.00 31.80 C
ATOM 22 P U B1829 111.071 136.491 61.466 1.00 43.17 P
ATOM 23 OP1 U B1829 112.208 135.532 61.531 1.00 41.12 O
ATOM 24 OP2 U B1829 111.071 137.706 62.320 1.00 41.18 O
ATOM 25 O5' U B1829 110.846 136.905 59.947 1.00 40.85 O
TER
Atoms:
OP1: (113.305,119.341,57.540)
OP2: (112.635,121.738,56.902)
C3': (112.694,121.283,62.076)
C1': (113.943,123.264,62.221)
C5': (114.155,120.368,60.195)
O4': (114.702,122.329,61.467)
C8: (113.169,124.039,59.928)
O2': (113.435,122.126,64.265)
C6: (111.806,127.236,60.401)
C5: (112.377,125.957,60.373)
C4: (112.826,125.442,61.573)
P: (113.504,120.804,57.674)
C4': (114.097,121.018,61.554)
C2': (112.901,122.470,63.004)
C2: (112.201,127.231,62.672)
N1: (111.724,127.855,61.591)
N3: (112.772,126.036,62.771)
N6: (111.353,127.870,59.321)
N7: (112.598,125.058,59.340)
N9: (113.339,124.205,61.281)
O5': (113.442,121.163,59.227)
O3': (112.144,120.147,62.726)
OP2: (112.635,121.738,56.902)
C3': (112.694,121.283,62.076)
C1': (113.943,123.264,62.221)
C5': (114.155,120.368,60.195)
O4': (114.702,122.329,61.467)
C8: (113.169,124.039,59.928)
O2': (113.435,122.126,64.265)
C6: (111.806,127.236,60.401)
C5: (112.377,125.957,60.373)
C4: (112.826,125.442,61.573)
P: (113.504,120.804,57.674)
C4': (114.097,121.018,61.554)
C2': (112.901,122.470,63.004)
C2: (112.201,127.231,62.672)
N1: (111.724,127.855,61.591)
N3: (112.772,126.036,62.771)
N6: (111.353,127.870,59.321)
N7: (112.598,125.058,59.340)
N9: (113.339,124.205,61.281)
O5': (113.442,121.163,59.227)
O3': (112.144,120.147,62.726)
C2: (109.630,131.093,58.726)
OP1: (106.254,138.101,58.451)
OP2: (107.056,136.623,56.525)
C4: (109.398,131.468,56.443)
O5': (107.293,135.851,58.883)
C3': (109.211,134.778,60.861)
C1': (108.567,132.579,60.369)
O4': (107.402,133.388,60.374)
C5': (106.914,135.762,60.277)
P: (106.457,136.753,57.867)
O2: (110.078,130.445,59.685)
C4': (107.701,134.673,60.975)
C2': (109.664,133.346,61.095)
O2': (109.644,132.971,62.459)
N1: (108.894,132.248,58.977)
N3: (109.850,130.717,57.447)
N4: (109.632,131.048,55.200)
C6: (108.461,133.030,57.942)
C5: (108.687,132.680,56.671)
O3': (109.745,135.675,61.818)
OP1: (106.254,138.101,58.451)
OP2: (107.056,136.623,56.525)
C4: (109.398,131.468,56.443)
O5': (107.293,135.851,58.883)
C3': (109.211,134.778,60.861)
C1': (108.567,132.579,60.369)
O4': (107.402,133.388,60.374)
C5': (106.914,135.762,60.277)
P: (106.457,136.753,57.867)
O2: (110.078,130.445,59.685)
C4': (107.701,134.673,60.975)
C2': (109.664,133.346,61.095)
O2': (109.644,132.971,62.459)
N1: (108.894,132.248,58.977)
N3: (109.850,130.717,57.447)
N4: (109.632,131.048,55.200)
C6: (108.461,133.030,57.942)
C5: (108.687,132.680,56.671)
O3': (109.745,135.675,61.818)
Image (generated by PyMOL):