ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1Z7F:B10:C5

Extra

PDB:
ATOM 1 O3' A A 9 3.021 14.410 48.496 1.00 30.25 O
ATOM 2 P A A 10 2.629 14.926 47.030 1.00 31.89 P
ATOM 3 OP1 A A 10 3.131 13.952 46.031 1.00 32.76 O
ATOM 4 OP2 A A 10 3.043 16.350 46.941 1.00 30.02 O
ATOM 5 O5' A A 10 1.042 14.852 47.056 1.00 30.92 O
ATOM 6 C5' A A 10 0.243 15.784 46.347 1.00 31.37 C
ATOM 7 C4' A A 10 -1.188 15.668 46.806 1.00 31.05 C
ATOM 8 O4' A A 10 -1.319 16.246 48.134 1.00 30.46 O
ATOM 9 C3' A A 10 -2.208 16.422 45.983 1.00 30.48 C
ATOM 10 O3' A A 10 -2.569 15.658 44.841 1.00 31.34 O
ATOM 11 C2' A A 10 -3.354 16.551 46.972 1.00 29.98 C
ATOM 12 O2' A A 10 -4.070 15.344 47.128 1.00 30.30 O
ATOM 13 C1' A A 10 -2.588 16.865 48.259 1.00 30.68 C
ATOM 14 N9 A A 10 -2.372 18.302 48.431 1.00 31.00 N
ATOM 15 C8 A A 10 -1.194 18.999 48.301 1.00 29.97 C
ATOM 16 N7 A A 10 -1.320 20.292 48.504 1.00 32.44 N
ATOM 17 C5 A A 10 -2.671 20.452 48.796 1.00 31.14 C
ATOM 18 C6 A A 10 -3.442 21.584 49.117 1.00 30.91 C
ATOM 19 N6 A A 10 -2.938 22.824 49.210 1.00 34.83 N
ATOM 20 N1 A A 10 -4.761 21.400 49.346 1.00 29.37 N
ATOM 21 C2 A A 10 -5.263 20.160 49.258 1.00 30.37 C
ATOM 22 N3 A A 10 -4.640 19.017 48.972 1.00 32.41 N
ATOM 23 C4 A A 10 -3.329 19.235 48.751 1.00 30.24 C
ATOM 24 P U A 11 -2.605 16.364 43.398 1.00 32.41 P
ATOM 25 OP1 U A 11 -2.917 15.306 42.396 1.00 28.84 O
ATOM 26 OP2 U A 11 -1.385 17.177 43.253 1.00 29.55 O
ATOM 27 O5' U A 11 -3.864 17.336 43.473 1.00 30.56 O
TER

ATOM 1 O3' A B 4 -9.718 30.269 50.801 1.00 39.66 O
ATOM 2 P C B 5 -9.573 29.666 52.287 1.00 42.14 P
ATOM 3 OP1 C B 5 -10.788 30.071 53.056 1.00 42.86 O
ATOM 4 OP2 C B 5 -8.225 29.965 52.832 1.00 40.51 O
ATOM 5 O5' C B 5 -9.615 28.088 52.074 1.00 37.31 O
ATOM 6 C5' C B 5 -10.680 27.463 51.367 1.00 33.97 C
ATOM 7 C4' C B 5 -10.294 26.041 51.045 1.00 33.08 C
ATOM 8 O4' C B 5 -9.233 26.049 50.053 1.00 32.16 O
ATOM 9 C3' C B 5 -9.676 25.302 52.224 1.00 31.29 C
ATOM 10 O3' C B 5 -10.683 24.781 53.081 1.00 29.32 O
ATOM 11 C2' C B 5 -8.858 24.218 51.533 1.00 31.14 C
ATOM 12 O2' C B 5 -9.644 23.117 51.138 1.00 26.76 O
ATOM 13 C1' C B 5 -8.349 24.966 50.295 1.00 31.97 C
ATOM 14 N1 C B 5 -6.986 25.494 50.471 1.00 32.54 N
ATOM 15 C2 C B 5 -5.915 24.662 50.152 1.00 32.60 C
ATOM 16 O2 C B 5 -6.156 23.527 49.718 1.00 32.78 O
ATOM 17 N3 C B 5 -4.648 25.111 50.319 1.00 34.20 N
ATOM 18 C4 C B 5 -4.435 26.348 50.778 1.00 34.52 C
ATOM 19 N4 C B 5 -3.164 26.751 50.916 1.00 31.78 N
ATOM 20 C5 C B 5 -5.514 27.224 51.111 1.00 32.81 C
ATOM 21 C6 C B 5 -6.763 26.760 50.940 1.00 33.07 C
ATOM 22 P U B 6 -10.287 24.241 54.540 1.00 30.50 P
ATOM 23 OP1 U B 6 -11.536 24.325 55.337 1.00 31.23 O
ATOM 24 OP2 U B 6 -9.065 24.905 55.035 1.00 28.77 O
ATOM 25 O5' U B 6 -9.916 22.708 54.283 1.00 29.83 O
TER

Atoms:
OP1: (3.131,13.952,46.031)
OP2: (3.043,16.350,46.941)
C3': (-2.208,16.422,45.983)
C1': (-2.588,16.865,48.259)
C5': (0.243,15.784,46.347)
O4': (-1.319,16.246,48.134)
C8: (-1.194,18.999,48.301)
O2': (-4.070,15.344,47.128)
C6: (-3.442,21.584,49.117)
C5: (-2.671,20.452,48.796)
C4: (-3.329,19.235,48.751)
P: (2.629,14.926,47.030)
C4': (-1.188,15.668,46.806)
C2': (-3.354,16.551,46.972)
C2: (-5.263,20.160,49.258)
N1: (-4.761,21.400,49.346)
N3: (-4.640,19.017,48.972)
N6: (-2.938,22.824,49.210)
N7: (-1.320,20.292,48.504)
N9: (-2.372,18.302,48.431)
O5': (1.042,14.852,47.056)
O3': (-2.569,15.658,44.841)
C2: (-5.915,24.662,50.152)
OP1: (-10.788,30.071,53.056)
OP2: (-8.225,29.965,52.832)
C4: (-4.435,26.348,50.778)
O5': (-9.615,28.088,52.074)
C3': (-9.676,25.302,52.224)
C1': (-8.349,24.966,50.295)
O4': (-9.233,26.049,50.053)
C5': (-10.680,27.463,51.367)
P: (-9.573,29.666,52.287)
O2: (-6.156,23.527,49.718)
C4': (-10.294,26.041,51.045)
C2': (-8.858,24.218,51.533)
O2': (-9.644,23.117,51.138)
N1: (-6.986,25.494,50.471)
N3: (-4.648,25.111,50.319)
N4: (-3.164,26.751,50.916)
C6: (-6.763,26.760,50.940)
C5: (-5.514,27.224,51.111)
O3': (-10.683,24.781,53.081)
Image (generated by PyMOL):
PyMOL image
show in jmol