Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:B25:B23
Extra
PDB:
ATOM 1 O3' U A 24 -188.924 -55.614 30.039 1.00 22.77 O
ATOM 2 P C A 25 -187.624 -54.744 30.353 1.00 26.58 P
ATOM 3 OP1 C A 25 -187.975 -53.808 31.459 1.00 26.58 O
ATOM 4 OP2 C A 25 -187.136 -54.188 29.056 1.00 26.58 O
ATOM 5 O5' C A 25 -186.629 -55.852 30.878 1.00 26.58 O
ATOM 6 C5' C A 25 -187.080 -56.803 31.818 1.00 26.58 C
ATOM 7 C4' C A 25 -186.158 -57.967 31.893 1.00 26.58 C
ATOM 8 O4' C A 25 -186.394 -58.847 30.776 1.00 26.58 O
ATOM 9 C3' C A 25 -184.688 -57.638 31.807 1.00 26.58 C
ATOM 10 O3' C A 25 -184.176 -57.211 33.041 1.00 26.58 O
ATOM 11 C2' C A 25 -184.091 -58.947 31.343 1.00 26.58 C
ATOM 12 O2' C A 25 -183.945 -59.835 32.441 1.00 26.58 O
ATOM 13 C1' C A 25 -185.191 -59.482 30.417 1.00 26.58 C
ATOM 14 N1 C A 25 -184.924 -59.194 28.996 1.00 26.62 N
ATOM 15 C2 C A 25 -184.177 -60.095 28.202 1.00 26.62 C
ATOM 16 O2 C A 25 -183.719 -61.129 28.705 1.00 26.62 O
ATOM 17 N3 C A 25 -183.956 -59.792 26.900 1.00 26.62 N
ATOM 18 C4 C A 25 -184.463 -58.653 26.395 1.00 26.62 C
ATOM 19 N4 C A 25 -184.238 -58.378 25.110 1.00 26.62 N
ATOM 20 C5 C A 25 -185.233 -57.730 27.171 1.00 26.62 C
ATOM 21 C6 C A 25 -185.444 -58.039 28.461 1.00 26.62 C
ATOM 22 P C A 26 -183.239 -55.917 33.131 1.00 14.47 P
ATOM 23 OP1 C A 26 -183.081 -55.618 34.570 1.00 14.47 O
ATOM 24 OP2 C A 26 -183.819 -54.865 32.239 1.00 14.47 O
ATOM 25 O5' C A 26 -181.854 -56.437 32.518 1.00 14.47 O
TER
ATOM 1 O3' G B 22 -185.860 -57.341 18.927 1.00 15.02 O
ATOM 2 P G B 23 -186.692 -56.004 19.219 1.00 11.04 P
ATOM 3 OP1 G B 23 -188.135 -56.368 19.159 1.00 11.04 O
ATOM 4 OP2 G B 23 -186.172 -54.937 18.302 1.00 11.04 O
ATOM 5 O5' G B 23 -186.292 -55.682 20.712 1.00 11.04 O
ATOM 6 C5' G B 23 -186.593 -56.611 21.738 1.00 11.04 C
ATOM 7 C4' G B 23 -186.304 -56.035 23.085 1.00 11.04 C
ATOM 8 O4' G B 23 -184.870 -55.907 23.230 1.00 11.04 O
ATOM 9 C3' G B 23 -186.888 -54.651 23.299 1.00 11.04 C
ATOM 10 O3' G B 23 -187.223 -54.466 24.670 1.00 11.04 O
ATOM 11 C2' G B 23 -185.757 -53.719 22.903 1.00 11.04 C
ATOM 12 O2' G B 23 -185.786 -52.468 23.574 1.00 11.04 O
ATOM 13 C1' G B 23 -184.495 -54.543 23.256 1.00 11.04 C
ATOM 14 N9 G B 23 -183.386 -54.365 22.306 1.00 10.89 N
ATOM 15 C8 G B 23 -183.536 -53.976 21.009 1.00 10.89 C
ATOM 16 N7 G B 23 -182.408 -53.866 20.389 1.00 10.89 N
ATOM 17 C5 G B 23 -181.439 -54.202 21.325 1.00 10.89 C
ATOM 18 C6 G B 23 -180.010 -54.271 21.222 1.00 10.89 C
ATOM 19 O6 G B 23 -179.283 -54.039 20.250 1.00 10.89 O
ATOM 20 N1 G B 23 -179.381 -54.674 22.379 1.00 10.89 N
ATOM 21 C2 G B 23 -180.064 -54.949 23.514 1.00 10.89 C
ATOM 22 N2 G B 23 -179.287 -55.315 24.545 1.00 10.89 N
ATOM 23 N3 G B 23 -181.393 -54.878 23.633 1.00 10.89 N
ATOM 24 C4 G B 23 -182.031 -54.513 22.510 1.00 10.89 C
ATOM 25 P U B 24 -188.751 -54.228 25.059 1.00 22.77 P
ATOM 26 OP1 U B 24 -189.563 -55.165 24.228 1.00 22.77 O
ATOM 27 OP2 U B 24 -188.993 -52.770 24.938 1.00 22.77 O
ATOM 28 O5' U B 24 -188.828 -54.668 26.580 1.00 22.77 O
TER
ATOM 2 P C A 25 -187.624 -54.744 30.353 1.00 26.58 P
ATOM 3 OP1 C A 25 -187.975 -53.808 31.459 1.00 26.58 O
ATOM 4 OP2 C A 25 -187.136 -54.188 29.056 1.00 26.58 O
ATOM 5 O5' C A 25 -186.629 -55.852 30.878 1.00 26.58 O
ATOM 6 C5' C A 25 -187.080 -56.803 31.818 1.00 26.58 C
ATOM 7 C4' C A 25 -186.158 -57.967 31.893 1.00 26.58 C
ATOM 8 O4' C A 25 -186.394 -58.847 30.776 1.00 26.58 O
ATOM 9 C3' C A 25 -184.688 -57.638 31.807 1.00 26.58 C
ATOM 10 O3' C A 25 -184.176 -57.211 33.041 1.00 26.58 O
ATOM 11 C2' C A 25 -184.091 -58.947 31.343 1.00 26.58 C
ATOM 12 O2' C A 25 -183.945 -59.835 32.441 1.00 26.58 O
ATOM 13 C1' C A 25 -185.191 -59.482 30.417 1.00 26.58 C
ATOM 14 N1 C A 25 -184.924 -59.194 28.996 1.00 26.62 N
ATOM 15 C2 C A 25 -184.177 -60.095 28.202 1.00 26.62 C
ATOM 16 O2 C A 25 -183.719 -61.129 28.705 1.00 26.62 O
ATOM 17 N3 C A 25 -183.956 -59.792 26.900 1.00 26.62 N
ATOM 18 C4 C A 25 -184.463 -58.653 26.395 1.00 26.62 C
ATOM 19 N4 C A 25 -184.238 -58.378 25.110 1.00 26.62 N
ATOM 20 C5 C A 25 -185.233 -57.730 27.171 1.00 26.62 C
ATOM 21 C6 C A 25 -185.444 -58.039 28.461 1.00 26.62 C
ATOM 22 P C A 26 -183.239 -55.917 33.131 1.00 14.47 P
ATOM 23 OP1 C A 26 -183.081 -55.618 34.570 1.00 14.47 O
ATOM 24 OP2 C A 26 -183.819 -54.865 32.239 1.00 14.47 O
ATOM 25 O5' C A 26 -181.854 -56.437 32.518 1.00 14.47 O
TER
ATOM 1 O3' G B 22 -185.860 -57.341 18.927 1.00 15.02 O
ATOM 2 P G B 23 -186.692 -56.004 19.219 1.00 11.04 P
ATOM 3 OP1 G B 23 -188.135 -56.368 19.159 1.00 11.04 O
ATOM 4 OP2 G B 23 -186.172 -54.937 18.302 1.00 11.04 O
ATOM 5 O5' G B 23 -186.292 -55.682 20.712 1.00 11.04 O
ATOM 6 C5' G B 23 -186.593 -56.611 21.738 1.00 11.04 C
ATOM 7 C4' G B 23 -186.304 -56.035 23.085 1.00 11.04 C
ATOM 8 O4' G B 23 -184.870 -55.907 23.230 1.00 11.04 O
ATOM 9 C3' G B 23 -186.888 -54.651 23.299 1.00 11.04 C
ATOM 10 O3' G B 23 -187.223 -54.466 24.670 1.00 11.04 O
ATOM 11 C2' G B 23 -185.757 -53.719 22.903 1.00 11.04 C
ATOM 12 O2' G B 23 -185.786 -52.468 23.574 1.00 11.04 O
ATOM 13 C1' G B 23 -184.495 -54.543 23.256 1.00 11.04 C
ATOM 14 N9 G B 23 -183.386 -54.365 22.306 1.00 10.89 N
ATOM 15 C8 G B 23 -183.536 -53.976 21.009 1.00 10.89 C
ATOM 16 N7 G B 23 -182.408 -53.866 20.389 1.00 10.89 N
ATOM 17 C5 G B 23 -181.439 -54.202 21.325 1.00 10.89 C
ATOM 18 C6 G B 23 -180.010 -54.271 21.222 1.00 10.89 C
ATOM 19 O6 G B 23 -179.283 -54.039 20.250 1.00 10.89 O
ATOM 20 N1 G B 23 -179.381 -54.674 22.379 1.00 10.89 N
ATOM 21 C2 G B 23 -180.064 -54.949 23.514 1.00 10.89 C
ATOM 22 N2 G B 23 -179.287 -55.315 24.545 1.00 10.89 N
ATOM 23 N3 G B 23 -181.393 -54.878 23.633 1.00 10.89 N
ATOM 24 C4 G B 23 -182.031 -54.513 22.510 1.00 10.89 C
ATOM 25 P U B 24 -188.751 -54.228 25.059 1.00 22.77 P
ATOM 26 OP1 U B 24 -189.563 -55.165 24.228 1.00 22.77 O
ATOM 27 OP2 U B 24 -188.993 -52.770 24.938 1.00 22.77 O
ATOM 28 O5' U B 24 -188.828 -54.668 26.580 1.00 22.77 O
TER
Atoms:
C2: (-184.177,-60.095,28.202)
OP1: (-187.975,-53.808,31.459)
OP2: (-187.136,-54.188,29.056)
C4: (-184.463,-58.653,26.395)
O5': (-186.629,-55.852,30.878)
C3': (-184.688,-57.638,31.807)
C1': (-185.191,-59.482,30.417)
O4': (-186.394,-58.847,30.776)
C5': (-187.080,-56.803,31.818)
P: (-187.624,-54.744,30.353)
O2: (-183.719,-61.129,28.705)
C4': (-186.158,-57.967,31.893)
C2': (-184.091,-58.947,31.343)
O2': (-183.945,-59.835,32.441)
N1: (-184.924,-59.194,28.996)
N3: (-183.956,-59.792,26.900)
N4: (-184.238,-58.378,25.110)
C6: (-185.444,-58.039,28.461)
C5: (-185.233,-57.730,27.171)
O3': (-184.176,-57.211,33.041)
OP1: (-187.975,-53.808,31.459)
OP2: (-187.136,-54.188,29.056)
C4: (-184.463,-58.653,26.395)
O5': (-186.629,-55.852,30.878)
C3': (-184.688,-57.638,31.807)
C1': (-185.191,-59.482,30.417)
O4': (-186.394,-58.847,30.776)
C5': (-187.080,-56.803,31.818)
P: (-187.624,-54.744,30.353)
O2: (-183.719,-61.129,28.705)
C4': (-186.158,-57.967,31.893)
C2': (-184.091,-58.947,31.343)
O2': (-183.945,-59.835,32.441)
N1: (-184.924,-59.194,28.996)
N3: (-183.956,-59.792,26.900)
N4: (-184.238,-58.378,25.110)
C6: (-185.444,-58.039,28.461)
C5: (-185.233,-57.730,27.171)
O3': (-184.176,-57.211,33.041)
OP1: (-188.135,-56.368,19.159)
OP2: (-186.172,-54.937,18.302)
C3': (-186.888,-54.651,23.299)
C1': (-184.495,-54.543,23.256)
C5': (-186.593,-56.611,21.738)
O6: (-179.283,-54.039,20.250)
O4': (-184.870,-55.907,23.230)
C8: (-183.536,-53.976,21.009)
C2: (-180.064,-54.949,23.514)
C6: (-180.010,-54.271,21.222)
C5: (-181.439,-54.202,21.325)
C4: (-182.031,-54.513,22.510)
P: (-186.692,-56.004,19.219)
C4': (-186.304,-56.035,23.085)
C2': (-185.757,-53.719,22.903)
O2': (-185.786,-52.468,23.574)
N1: (-179.381,-54.674,22.379)
N2: (-179.287,-55.315,24.545)
N3: (-181.393,-54.878,23.633)
N7: (-182.408,-53.866,20.389)
N9: (-183.386,-54.365,22.306)
O5': (-186.292,-55.682,20.712)
O3': (-187.223,-54.466,24.670)
OP2: (-186.172,-54.937,18.302)
C3': (-186.888,-54.651,23.299)
C1': (-184.495,-54.543,23.256)
C5': (-186.593,-56.611,21.738)
O6: (-179.283,-54.039,20.250)
O4': (-184.870,-55.907,23.230)
C8: (-183.536,-53.976,21.009)
C2: (-180.064,-54.949,23.514)
C6: (-180.010,-54.271,21.222)
C5: (-181.439,-54.202,21.325)
C4: (-182.031,-54.513,22.510)
P: (-186.692,-56.004,19.219)
C4': (-186.304,-56.035,23.085)
C2': (-185.757,-53.719,22.903)
O2': (-185.786,-52.468,23.574)
N1: (-179.381,-54.674,22.379)
N2: (-179.287,-55.315,24.545)
N3: (-181.393,-54.878,23.633)
N7: (-182.408,-53.866,20.389)
N9: (-183.386,-54.365,22.306)
O5': (-186.292,-55.682,20.712)
O3': (-187.223,-54.466,24.670)
Image (generated by PyMOL):