ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2ZZM:B40:B34

Extra

PDB:
ATOM 1 O3' G A 39 18.368 -8.441 -18.187 1.00 41.77 O
ATOM 2 P A A 40 17.793 -9.780 -18.835 1.00 32.33 P
ATOM 3 OP1 A A 40 16.397 -9.509 -19.263 1.00 57.15 O
ATOM 4 OP2 A A 40 18.068 -10.908 -17.906 1.00 36.79 O
ATOM 5 O5' A A 40 18.664 -10.020 -20.138 1.00 40.35 O
ATOM 6 C5' A A 40 19.712 -9.153 -20.487 1.00 27.99 C
ATOM 7 C4' A A 40 19.507 -8.631 -21.891 1.00 38.26 C
ATOM 8 O4' A A 40 20.278 -7.413 -22.010 1.00 28.32 O
ATOM 9 C3' A A 40 19.952 -9.496 -23.067 1.00 32.19 C
ATOM 10 O3' A A 40 18.952 -10.442 -23.489 1.00 38.93 O
ATOM 11 C2' A A 40 20.160 -8.429 -24.135 1.00 37.95 C
ATOM 12 O2' A A 40 18.924 -7.981 -24.623 1.00 38.53 O
ATOM 13 C1' A A 40 20.775 -7.290 -23.316 1.00 34.90 C
ATOM 14 N9 A A 40 22.235 -7.309 -23.239 1.00 35.74 N
ATOM 15 C8 A A 40 23.017 -7.701 -22.183 1.00 31.03 C
ATOM 16 N7 A A 40 24.304 -7.634 -22.425 1.00 35.67 N
ATOM 17 C5 A A 40 24.372 -7.154 -23.722 1.00 35.48 C
ATOM 18 C6 A A 40 25.450 -6.877 -24.557 1.00 44.06 C
ATOM 19 N6 A A 40 26.716 -7.032 -24.179 1.00 63.56 N
ATOM 20 N1 A A 40 25.187 -6.437 -25.808 1.00 41.40 N
ATOM 21 C2 A A 40 23.907 -6.289 -26.173 1.00 43.20 C
ATOM 22 N3 A A 40 22.800 -6.508 -25.470 1.00 38.38 N
ATOM 23 C4 A A 40 23.107 -6.947 -24.237 1.00 41.58 C
ATOM 24 P C A 41 19.389 -11.830 -24.210 1.00 42.79 P
ATOM 25 OP1 C A 41 18.154 -12.554 -24.597 1.00 41.67 O
ATOM 26 OP2 C A 41 20.413 -12.522 -23.393 1.00 36.82 O
ATOM 27 O5' C A 41 20.120 -11.407 -25.558 1.00 37.38 O
TER

ATOM 1 O3' G B 33 34.877 -8.537 -30.444 1.00 84.19 O
ATOM 2 P C B 34 34.793 -6.945 -30.456 1.00 89.43 P
ATOM 3 OP1 C B 34 35.653 -6.398 -31.546 1.00 78.47 O
ATOM 4 OP2 C B 34 35.020 -6.518 -29.043 1.00 60.55 O
ATOM 5 O5' C B 34 33.274 -6.714 -30.863 1.00 81.23 O
ATOM 6 C5' C B 34 32.534 -5.657 -30.304 1.00 80.98 C
ATOM 7 C4' C B 34 31.071 -6.000 -30.274 1.00 78.22 C
ATOM 8 O4' C B 34 30.862 -7.256 -29.585 1.00 70.87 O
ATOM 9 C3' C B 34 30.282 -4.963 -29.504 1.00 79.47 C
ATOM 10 O3' C B 34 29.847 -3.983 -30.434 1.00 92.27 O
ATOM 11 C2' C B 34 29.137 -5.774 -28.923 1.00 74.16 C
ATOM 12 O2' C B 34 28.085 -5.953 -29.850 1.00 84.81 O
ATOM 13 C1' C B 34 29.828 -7.111 -28.639 1.00 66.39 C
ATOM 14 N1 C B 34 30.440 -7.234 -27.308 1.00 61.11 N
ATOM 15 C2 C B 34 29.625 -7.205 -26.172 1.00 61.04 C
ATOM 16 O2 C B 34 28.407 -7.071 -26.314 1.00 68.36 O
ATOM 17 N3 C B 34 30.189 -7.340 -24.948 1.00 60.68 N
ATOM 18 C4 C B 34 31.505 -7.526 -24.842 1.00 60.66 C
ATOM 19 N4 C B 34 32.014 -7.703 -23.626 1.00 69.03 N
ATOM 20 C5 C B 34 32.357 -7.551 -25.982 1.00 54.40 C
ATOM 21 C6 C B 34 31.791 -7.394 -27.181 1.00 46.34 C
ATOM 22 P C B 35 30.813 -2.749 -30.810 1.00101.03 P
ATOM 23 OP1 C B 35 30.665 -2.491 -32.270 1.00 89.58 O
ATOM 24 OP2 C B 35 32.174 -2.978 -30.230 1.00 71.84 O
ATOM 25 O5' C B 35 30.175 -1.535 -30.007 1.00 92.75 O
TER

Atoms:
OP1: (16.397,-9.509,-19.263)
OP2: (18.068,-10.908,-17.906)
C3': (19.952,-9.496,-23.067)
C1': (20.775,-7.290,-23.316)
C5': (19.712,-9.153,-20.487)
O4': (20.278,-7.413,-22.010)
C8: (23.017,-7.701,-22.183)
O2': (18.924,-7.981,-24.623)
C6: (25.450,-6.877,-24.557)
C5: (24.372,-7.154,-23.722)
C4: (23.107,-6.947,-24.237)
P: (17.793,-9.780,-18.835)
C4': (19.507,-8.631,-21.891)
C2': (20.160,-8.429,-24.135)
C2: (23.907,-6.289,-26.173)
N1: (25.187,-6.437,-25.808)
N3: (22.800,-6.508,-25.470)
N6: (26.716,-7.032,-24.179)
N7: (24.304,-7.634,-22.425)
N9: (22.235,-7.309,-23.239)
O5': (18.664,-10.020,-20.138)
O3': (18.952,-10.442,-23.489)
C2: (29.625,-7.205,-26.172)
OP1: (35.653,-6.398,-31.546)
OP2: (35.020,-6.518,-29.043)
C4: (31.505,-7.526,-24.842)
O5': (33.274,-6.714,-30.863)
C3': (30.282,-4.963,-29.504)
C1': (29.828,-7.111,-28.639)
O4': (30.862,-7.256,-29.585)
C5': (32.534,-5.657,-30.304)
P: (34.793,-6.945,-30.456)
O2: (28.407,-7.071,-26.314)
C4': (31.071,-6.000,-30.274)
C2': (29.137,-5.774,-28.923)
O2': (28.085,-5.953,-29.850)
N1: (30.440,-7.234,-27.308)
N3: (30.189,-7.340,-24.948)
N4: (32.014,-7.703,-23.626)
C6: (31.791,-7.394,-27.181)
C5: (32.357,-7.551,-25.982)
O3': (29.847,-3.983,-30.434)
Image (generated by PyMOL):
PyMOL image
show in jmol