Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21179:21158
Extra
PDB:
ATOM 1 O3' A A1178 -67.317 -53.041 57.124 1.00 74.90 O
ATOM 2 P C A1179 -68.532 -52.522 56.182 1.00 72.18 P
ATOM 3 OP1 C A1179 -69.745 -52.494 57.021 1.00 72.58 O
ATOM 4 OP2 C A1179 -68.532 -53.367 54.974 1.00 72.32 O
ATOM 5 O5' C A1179 -68.138 -51.031 55.790 1.00 71.69 O
ATOM 6 C5' C A1179 -68.295 -50.576 54.451 1.00 71.56 C
ATOM 7 C4' C A1179 -68.451 -49.081 54.367 1.00 71.27 C
ATOM 8 O4' C A1179 -67.297 -48.429 54.975 1.00 70.83 O
ATOM 9 C3' C A1179 -68.482 -48.516 52.961 1.00 71.13 C
ATOM 10 O3' C A1179 -69.747 -48.623 52.349 1.00 71.51 O
ATOM 11 C2' C A1179 -68.021 -47.087 53.164 1.00 70.71 C
ATOM 12 O2' C A1179 -69.062 -46.305 53.705 1.00 70.87 O
ATOM 13 C1' C A1179 -66.959 -47.270 54.241 1.00 70.47 C
ATOM 14 N1 C A1179 -65.616 -47.454 53.654 1.00 70.14 N
ATOM 15 C2 C A1179 -64.984 -46.348 53.087 1.00 69.74 C
ATOM 16 O2 C A1179 -65.560 -45.246 53.120 1.00 69.67 O
ATOM 17 N3 C A1179 -63.769 -46.480 52.524 1.00 69.46 N
ATOM 18 C4 C A1179 -63.175 -47.661 52.519 1.00 69.56 C
ATOM 19 N4 C A1179 -61.972 -47.756 51.939 1.00 69.30 N
ATOM 20 C5 C A1179 -63.790 -48.812 53.089 1.00 69.96 C
ATOM 21 C6 C A1179 -64.997 -48.665 53.637 1.00 70.24 C
ATOM 22 P G A1180 -69.879 -49.269 50.888 1.00 71.32 P
ATOM 23 OP1 G A1180 -71.237 -49.800 50.766 1.00 71.85 O
ATOM 24 OP2 G A1180 -68.729 -50.197 50.712 1.00 71.18 O
ATOM 25 O5' G A1180 -69.719 -48.008 49.947 1.00 71.03 O
TER
ATOM 1 O3' U B1157 -60.972 -56.525 50.464 1.00 69.67 O
ATOM 2 P G B1158 -59.815 -55.587 49.868 1.00 70.78 P
ATOM 3 OP1 G B1158 -60.194 -55.172 48.507 1.00 70.72 O
ATOM 4 OP2 G B1158 -58.553 -56.321 50.065 1.00 70.75 O
ATOM 5 O5' G B1158 -59.847 -54.355 50.828 1.00 70.49 O
ATOM 6 C5' G B1158 -60.637 -53.231 50.536 1.00 70.36 C
ATOM 7 C4' G B1158 -60.768 -52.352 51.749 1.00 70.20 C
ATOM 8 O4' G B1158 -60.751 -53.182 52.949 1.00 70.44 O
ATOM 9 C3' G B1158 -59.643 -51.354 51.975 1.00 69.75 C
ATOM 10 O3' G B1158 -59.789 -50.178 51.198 1.00 69.49 O
ATOM 11 C2' G B1158 -59.744 -51.106 53.467 1.00 69.75 C
ATOM 12 O2' G B1158 -60.875 -50.285 53.732 1.00 69.79 O
ATOM 13 C1' G B1158 -60.068 -52.512 53.983 1.00 70.18 C
ATOM 14 N9 G B1158 -58.865 -53.298 54.343 1.00 70.18 N
ATOM 15 C8 G B1158 -58.445 -54.429 53.678 1.00 70.37 C
ATOM 16 N7 G B1158 -57.377 -54.981 54.190 1.00 70.37 N
ATOM 17 C5 G B1158 -57.090 -54.185 55.274 1.00 70.18 C
ATOM 18 C6 G B1158 -56.031 -54.296 56.193 1.00 70.11 C
ATOM 19 O6 G B1158 -55.127 -55.141 56.225 1.00 70.23 O
ATOM 20 N1 G B1158 -56.092 -53.296 57.154 1.00 69.91 N
ATOM 21 C2 G B1158 -57.037 -52.315 57.203 1.00 69.79 C
ATOM 22 N2 G B1158 -56.897 -51.444 58.203 1.00 69.61 N
ATOM 23 N3 G B1158 -58.035 -52.200 56.338 1.00 69.87 N
ATOM 24 C4 G B1158 -58.003 -53.159 55.403 1.00 70.05 C
ATOM 25 P C B1159 -58.488 -49.371 50.717 1.00 76.96 P
ATOM 26 OP1 C B1159 -58.958 -48.127 50.043 1.00 76.78 O
ATOM 27 OP2 C B1159 -57.655 -50.318 49.967 1.00 77.02 O
ATOM 28 O5' C B1159 -57.790 -48.989 52.080 1.00 76.76 O
TER
ATOM 2 P C A1179 -68.532 -52.522 56.182 1.00 72.18 P
ATOM 3 OP1 C A1179 -69.745 -52.494 57.021 1.00 72.58 O
ATOM 4 OP2 C A1179 -68.532 -53.367 54.974 1.00 72.32 O
ATOM 5 O5' C A1179 -68.138 -51.031 55.790 1.00 71.69 O
ATOM 6 C5' C A1179 -68.295 -50.576 54.451 1.00 71.56 C
ATOM 7 C4' C A1179 -68.451 -49.081 54.367 1.00 71.27 C
ATOM 8 O4' C A1179 -67.297 -48.429 54.975 1.00 70.83 O
ATOM 9 C3' C A1179 -68.482 -48.516 52.961 1.00 71.13 C
ATOM 10 O3' C A1179 -69.747 -48.623 52.349 1.00 71.51 O
ATOM 11 C2' C A1179 -68.021 -47.087 53.164 1.00 70.71 C
ATOM 12 O2' C A1179 -69.062 -46.305 53.705 1.00 70.87 O
ATOM 13 C1' C A1179 -66.959 -47.270 54.241 1.00 70.47 C
ATOM 14 N1 C A1179 -65.616 -47.454 53.654 1.00 70.14 N
ATOM 15 C2 C A1179 -64.984 -46.348 53.087 1.00 69.74 C
ATOM 16 O2 C A1179 -65.560 -45.246 53.120 1.00 69.67 O
ATOM 17 N3 C A1179 -63.769 -46.480 52.524 1.00 69.46 N
ATOM 18 C4 C A1179 -63.175 -47.661 52.519 1.00 69.56 C
ATOM 19 N4 C A1179 -61.972 -47.756 51.939 1.00 69.30 N
ATOM 20 C5 C A1179 -63.790 -48.812 53.089 1.00 69.96 C
ATOM 21 C6 C A1179 -64.997 -48.665 53.637 1.00 70.24 C
ATOM 22 P G A1180 -69.879 -49.269 50.888 1.00 71.32 P
ATOM 23 OP1 G A1180 -71.237 -49.800 50.766 1.00 71.85 O
ATOM 24 OP2 G A1180 -68.729 -50.197 50.712 1.00 71.18 O
ATOM 25 O5' G A1180 -69.719 -48.008 49.947 1.00 71.03 O
TER
ATOM 1 O3' U B1157 -60.972 -56.525 50.464 1.00 69.67 O
ATOM 2 P G B1158 -59.815 -55.587 49.868 1.00 70.78 P
ATOM 3 OP1 G B1158 -60.194 -55.172 48.507 1.00 70.72 O
ATOM 4 OP2 G B1158 -58.553 -56.321 50.065 1.00 70.75 O
ATOM 5 O5' G B1158 -59.847 -54.355 50.828 1.00 70.49 O
ATOM 6 C5' G B1158 -60.637 -53.231 50.536 1.00 70.36 C
ATOM 7 C4' G B1158 -60.768 -52.352 51.749 1.00 70.20 C
ATOM 8 O4' G B1158 -60.751 -53.182 52.949 1.00 70.44 O
ATOM 9 C3' G B1158 -59.643 -51.354 51.975 1.00 69.75 C
ATOM 10 O3' G B1158 -59.789 -50.178 51.198 1.00 69.49 O
ATOM 11 C2' G B1158 -59.744 -51.106 53.467 1.00 69.75 C
ATOM 12 O2' G B1158 -60.875 -50.285 53.732 1.00 69.79 O
ATOM 13 C1' G B1158 -60.068 -52.512 53.983 1.00 70.18 C
ATOM 14 N9 G B1158 -58.865 -53.298 54.343 1.00 70.18 N
ATOM 15 C8 G B1158 -58.445 -54.429 53.678 1.00 70.37 C
ATOM 16 N7 G B1158 -57.377 -54.981 54.190 1.00 70.37 N
ATOM 17 C5 G B1158 -57.090 -54.185 55.274 1.00 70.18 C
ATOM 18 C6 G B1158 -56.031 -54.296 56.193 1.00 70.11 C
ATOM 19 O6 G B1158 -55.127 -55.141 56.225 1.00 70.23 O
ATOM 20 N1 G B1158 -56.092 -53.296 57.154 1.00 69.91 N
ATOM 21 C2 G B1158 -57.037 -52.315 57.203 1.00 69.79 C
ATOM 22 N2 G B1158 -56.897 -51.444 58.203 1.00 69.61 N
ATOM 23 N3 G B1158 -58.035 -52.200 56.338 1.00 69.87 N
ATOM 24 C4 G B1158 -58.003 -53.159 55.403 1.00 70.05 C
ATOM 25 P C B1159 -58.488 -49.371 50.717 1.00 76.96 P
ATOM 26 OP1 C B1159 -58.958 -48.127 50.043 1.00 76.78 O
ATOM 27 OP2 C B1159 -57.655 -50.318 49.967 1.00 77.02 O
ATOM 28 O5' C B1159 -57.790 -48.989 52.080 1.00 76.76 O
TER
Atoms:
C2: (-64.984,-46.348,53.087)
OP1: (-69.745,-52.494,57.021)
OP2: (-68.532,-53.367,54.974)
C4: (-63.175,-47.661,52.519)
O5': (-68.138,-51.031,55.790)
C3': (-68.482,-48.516,52.961)
C1': (-66.959,-47.270,54.241)
O4': (-67.297,-48.429,54.975)
C5': (-68.295,-50.576,54.451)
P: (-68.532,-52.522,56.182)
O2: (-65.560,-45.246,53.120)
C4': (-68.451,-49.081,54.367)
C2': (-68.021,-47.087,53.164)
O2': (-69.062,-46.305,53.705)
N1: (-65.616,-47.454,53.654)
N3: (-63.769,-46.480,52.524)
N4: (-61.972,-47.756,51.939)
C6: (-64.997,-48.665,53.637)
C5: (-63.790,-48.812,53.089)
O3': (-69.747,-48.623,52.349)
OP1: (-69.745,-52.494,57.021)
OP2: (-68.532,-53.367,54.974)
C4: (-63.175,-47.661,52.519)
O5': (-68.138,-51.031,55.790)
C3': (-68.482,-48.516,52.961)
C1': (-66.959,-47.270,54.241)
O4': (-67.297,-48.429,54.975)
C5': (-68.295,-50.576,54.451)
P: (-68.532,-52.522,56.182)
O2: (-65.560,-45.246,53.120)
C4': (-68.451,-49.081,54.367)
C2': (-68.021,-47.087,53.164)
O2': (-69.062,-46.305,53.705)
N1: (-65.616,-47.454,53.654)
N3: (-63.769,-46.480,52.524)
N4: (-61.972,-47.756,51.939)
C6: (-64.997,-48.665,53.637)
C5: (-63.790,-48.812,53.089)
O3': (-69.747,-48.623,52.349)
OP1: (-60.194,-55.172,48.507)
OP2: (-58.553,-56.321,50.065)
C3': (-59.643,-51.354,51.975)
C1': (-60.068,-52.512,53.983)
C5': (-60.637,-53.231,50.536)
O6: (-55.127,-55.141,56.225)
O4': (-60.751,-53.182,52.949)
C8: (-58.445,-54.429,53.678)
C2: (-57.037,-52.315,57.203)
C6: (-56.031,-54.296,56.193)
C5: (-57.090,-54.185,55.274)
C4: (-58.003,-53.159,55.403)
P: (-59.815,-55.587,49.868)
C4': (-60.768,-52.352,51.749)
C2': (-59.744,-51.106,53.467)
O2': (-60.875,-50.285,53.732)
N1: (-56.092,-53.296,57.154)
N2: (-56.897,-51.444,58.203)
N3: (-58.035,-52.200,56.338)
N7: (-57.377,-54.981,54.190)
N9: (-58.865,-53.298,54.343)
O5': (-59.847,-54.355,50.828)
O3': (-59.789,-50.178,51.198)
OP2: (-58.553,-56.321,50.065)
C3': (-59.643,-51.354,51.975)
C1': (-60.068,-52.512,53.983)
C5': (-60.637,-53.231,50.536)
O6: (-55.127,-55.141,56.225)
O4': (-60.751,-53.182,52.949)
C8: (-58.445,-54.429,53.678)
C2: (-57.037,-52.315,57.203)
C6: (-56.031,-54.296,56.193)
C5: (-57.090,-54.185,55.274)
C4: (-58.003,-53.159,55.403)
P: (-59.815,-55.587,49.868)
C4': (-60.768,-52.352,51.749)
C2': (-59.744,-51.106,53.467)
O2': (-60.875,-50.285,53.732)
N1: (-56.092,-53.296,57.154)
N2: (-56.897,-51.444,58.203)
N3: (-58.035,-52.200,56.338)
N7: (-57.377,-54.981,54.190)
N9: (-58.865,-53.298,54.343)
O5': (-59.847,-54.355,50.828)
O3': (-59.789,-50.178,51.198)
Image (generated by PyMOL):