Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01817:01828
Extra
PDB:
ATOM 1 O3' A A1816 114.908 120.982 57.177 1.00 38.85 O
ATOM 2 P A A1817 113.414 120.704 57.720 1.00 39.13 P
ATOM 3 OP1 A A1817 113.227 119.231 57.713 1.00 39.43 O
ATOM 4 OP2 A A1817 112.455 121.567 56.977 1.00 38.60 O
ATOM 5 O5' A A1817 113.448 121.181 59.240 1.00 37.20 O
ATOM 6 C5' A A1817 114.115 120.397 60.249 1.00 36.09 C
ATOM 7 C4' A A1817 114.019 121.087 61.590 1.00 37.80 C
ATOM 8 O4' A A1817 114.601 122.411 61.479 1.00 37.29 O
ATOM 9 C3' A A1817 112.602 121.344 62.079 1.00 37.31 C
ATOM 10 O3' A A1817 112.060 120.213 62.749 1.00 39.30 O
ATOM 11 C2' A A1817 112.781 122.534 63.004 1.00 35.72 C
ATOM 12 O2' A A1817 113.270 122.172 64.278 1.00 33.41 O
ATOM 13 C1' A A1817 113.838 123.335 62.242 1.00 35.43 C
ATOM 14 N9 A A1817 113.246 124.303 61.318 1.00 32.91 N
ATOM 15 C8 A A1817 113.122 124.205 59.953 1.00 33.26 C
ATOM 16 N7 A A1817 112.536 125.241 59.401 1.00 32.50 N
ATOM 17 C5 A A1817 112.261 126.077 60.473 1.00 30.09 C
ATOM 18 C6 A A1817 111.647 127.336 60.553 1.00 28.94 C
ATOM 19 N6 A A1817 111.205 128.014 59.494 1.00 29.00 N
ATOM 20 N1 A A1817 111.506 127.888 61.773 1.00 28.75 N
ATOM 21 C2 A A1817 111.972 127.221 62.833 1.00 32.17 C
ATOM 22 N3 A A1817 112.582 126.036 62.886 1.00 31.94 N
ATOM 23 C4 A A1817 112.692 125.511 61.658 1.00 31.34 C
ATOM 24 P U A1818 110.564 119.731 62.412 1.00 41.14 P
ATOM 25 OP1 U A1818 110.301 118.595 63.328 1.00 39.80 O
ATOM 26 OP2 U A1818 110.428 119.545 60.933 1.00 36.74 O
ATOM 27 O5' U A1818 109.654 120.968 62.839 1.00 36.99 O
TER
ATOM 1 O3' A B1827 104.894 136.107 57.852 1.00 33.55 O
ATOM 2 P C B1828 106.350 136.770 57.956 1.00 31.90 P
ATOM 3 OP1 C B1828 106.135 138.084 58.604 1.00 32.28 O
ATOM 4 OP2 C B1828 107.032 136.698 56.647 1.00 32.30 O
ATOM 5 O5' C B1828 107.142 135.831 58.966 1.00 32.76 O
ATOM 6 C5' C B1828 106.828 135.817 60.373 1.00 33.21 C
ATOM 7 C4' C B1828 107.606 134.723 61.065 1.00 34.97 C
ATOM 8 O4' C B1828 107.294 133.450 60.435 1.00 35.74 O
ATOM 9 C3' C B1828 109.120 134.821 60.950 1.00 35.20 C
ATOM 10 O3' C B1828 109.647 135.704 61.937 1.00 37.63 O
ATOM 11 C2' C B1828 109.554 133.377 61.163 1.00 33.11 C
ATOM 12 O2' C B1828 109.514 132.992 62.519 1.00 37.23 O
ATOM 13 C1' C B1828 108.447 132.624 60.431 1.00 31.16 C
ATOM 14 N1 C B1828 108.776 132.283 59.040 1.00 29.44 N
ATOM 15 C2 C B1828 109.547 131.150 58.798 1.00 29.44 C
ATOM 16 O2 C B1828 109.987 130.506 59.761 1.00 31.37 O
ATOM 17 N3 C B1828 109.810 130.790 57.526 1.00 30.00 N
ATOM 18 C4 C B1828 109.362 131.537 56.515 1.00 29.66 C
ATOM 19 N4 C B1828 109.650 131.140 55.273 1.00 29.40 N
ATOM 20 C5 C B1828 108.602 132.719 56.733 1.00 27.95 C
ATOM 21 C6 C B1828 108.329 133.049 57.998 1.00 28.35 C
ATOM 22 P U B1829 110.933 136.607 61.599 1.00 35.20 P
ATOM 23 OP1 U B1829 112.110 135.705 61.534 1.00 35.50 O
ATOM 24 OP2 U B1829 110.934 137.751 62.541 1.00 32.25 O
ATOM 25 O5' U B1829 110.649 137.146 60.131 1.00 35.20 O
TER
ATOM 2 P A A1817 113.414 120.704 57.720 1.00 39.13 P
ATOM 3 OP1 A A1817 113.227 119.231 57.713 1.00 39.43 O
ATOM 4 OP2 A A1817 112.455 121.567 56.977 1.00 38.60 O
ATOM 5 O5' A A1817 113.448 121.181 59.240 1.00 37.20 O
ATOM 6 C5' A A1817 114.115 120.397 60.249 1.00 36.09 C
ATOM 7 C4' A A1817 114.019 121.087 61.590 1.00 37.80 C
ATOM 8 O4' A A1817 114.601 122.411 61.479 1.00 37.29 O
ATOM 9 C3' A A1817 112.602 121.344 62.079 1.00 37.31 C
ATOM 10 O3' A A1817 112.060 120.213 62.749 1.00 39.30 O
ATOM 11 C2' A A1817 112.781 122.534 63.004 1.00 35.72 C
ATOM 12 O2' A A1817 113.270 122.172 64.278 1.00 33.41 O
ATOM 13 C1' A A1817 113.838 123.335 62.242 1.00 35.43 C
ATOM 14 N9 A A1817 113.246 124.303 61.318 1.00 32.91 N
ATOM 15 C8 A A1817 113.122 124.205 59.953 1.00 33.26 C
ATOM 16 N7 A A1817 112.536 125.241 59.401 1.00 32.50 N
ATOM 17 C5 A A1817 112.261 126.077 60.473 1.00 30.09 C
ATOM 18 C6 A A1817 111.647 127.336 60.553 1.00 28.94 C
ATOM 19 N6 A A1817 111.205 128.014 59.494 1.00 29.00 N
ATOM 20 N1 A A1817 111.506 127.888 61.773 1.00 28.75 N
ATOM 21 C2 A A1817 111.972 127.221 62.833 1.00 32.17 C
ATOM 22 N3 A A1817 112.582 126.036 62.886 1.00 31.94 N
ATOM 23 C4 A A1817 112.692 125.511 61.658 1.00 31.34 C
ATOM 24 P U A1818 110.564 119.731 62.412 1.00 41.14 P
ATOM 25 OP1 U A1818 110.301 118.595 63.328 1.00 39.80 O
ATOM 26 OP2 U A1818 110.428 119.545 60.933 1.00 36.74 O
ATOM 27 O5' U A1818 109.654 120.968 62.839 1.00 36.99 O
TER
ATOM 1 O3' A B1827 104.894 136.107 57.852 1.00 33.55 O
ATOM 2 P C B1828 106.350 136.770 57.956 1.00 31.90 P
ATOM 3 OP1 C B1828 106.135 138.084 58.604 1.00 32.28 O
ATOM 4 OP2 C B1828 107.032 136.698 56.647 1.00 32.30 O
ATOM 5 O5' C B1828 107.142 135.831 58.966 1.00 32.76 O
ATOM 6 C5' C B1828 106.828 135.817 60.373 1.00 33.21 C
ATOM 7 C4' C B1828 107.606 134.723 61.065 1.00 34.97 C
ATOM 8 O4' C B1828 107.294 133.450 60.435 1.00 35.74 O
ATOM 9 C3' C B1828 109.120 134.821 60.950 1.00 35.20 C
ATOM 10 O3' C B1828 109.647 135.704 61.937 1.00 37.63 O
ATOM 11 C2' C B1828 109.554 133.377 61.163 1.00 33.11 C
ATOM 12 O2' C B1828 109.514 132.992 62.519 1.00 37.23 O
ATOM 13 C1' C B1828 108.447 132.624 60.431 1.00 31.16 C
ATOM 14 N1 C B1828 108.776 132.283 59.040 1.00 29.44 N
ATOM 15 C2 C B1828 109.547 131.150 58.798 1.00 29.44 C
ATOM 16 O2 C B1828 109.987 130.506 59.761 1.00 31.37 O
ATOM 17 N3 C B1828 109.810 130.790 57.526 1.00 30.00 N
ATOM 18 C4 C B1828 109.362 131.537 56.515 1.00 29.66 C
ATOM 19 N4 C B1828 109.650 131.140 55.273 1.00 29.40 N
ATOM 20 C5 C B1828 108.602 132.719 56.733 1.00 27.95 C
ATOM 21 C6 C B1828 108.329 133.049 57.998 1.00 28.35 C
ATOM 22 P U B1829 110.933 136.607 61.599 1.00 35.20 P
ATOM 23 OP1 U B1829 112.110 135.705 61.534 1.00 35.50 O
ATOM 24 OP2 U B1829 110.934 137.751 62.541 1.00 32.25 O
ATOM 25 O5' U B1829 110.649 137.146 60.131 1.00 35.20 O
TER
Atoms:
OP1: (113.227,119.231,57.713)
OP2: (112.455,121.567,56.977)
C3': (112.602,121.344,62.079)
C1': (113.838,123.335,62.242)
C5': (114.115,120.397,60.249)
O4': (114.601,122.411,61.479)
C8: (113.122,124.205,59.953)
O2': (113.270,122.172,64.278)
C6: (111.647,127.336,60.553)
C5: (112.261,126.077,60.473)
C4: (112.692,125.511,61.658)
P: (113.414,120.704,57.720)
C4': (114.019,121.087,61.590)
C2': (112.781,122.534,63.004)
C2: (111.972,127.221,62.833)
N1: (111.506,127.888,61.773)
N3: (112.582,126.036,62.886)
N6: (111.205,128.014,59.494)
N7: (112.536,125.241,59.401)
N9: (113.246,124.303,61.318)
O5': (113.448,121.181,59.240)
O3': (112.060,120.213,62.749)
OP2: (112.455,121.567,56.977)
C3': (112.602,121.344,62.079)
C1': (113.838,123.335,62.242)
C5': (114.115,120.397,60.249)
O4': (114.601,122.411,61.479)
C8: (113.122,124.205,59.953)
O2': (113.270,122.172,64.278)
C6: (111.647,127.336,60.553)
C5: (112.261,126.077,60.473)
C4: (112.692,125.511,61.658)
P: (113.414,120.704,57.720)
C4': (114.019,121.087,61.590)
C2': (112.781,122.534,63.004)
C2: (111.972,127.221,62.833)
N1: (111.506,127.888,61.773)
N3: (112.582,126.036,62.886)
N6: (111.205,128.014,59.494)
N7: (112.536,125.241,59.401)
N9: (113.246,124.303,61.318)
O5': (113.448,121.181,59.240)
O3': (112.060,120.213,62.749)
C2: (109.547,131.150,58.798)
OP1: (106.135,138.084,58.604)
OP2: (107.032,136.698,56.647)
C4: (109.362,131.537,56.515)
O5': (107.142,135.831,58.966)
C3': (109.120,134.821,60.950)
C1': (108.447,132.624,60.431)
O4': (107.294,133.450,60.435)
C5': (106.828,135.817,60.373)
P: (106.350,136.770,57.956)
O2: (109.987,130.506,59.761)
C4': (107.606,134.723,61.065)
C2': (109.554,133.377,61.163)
O2': (109.514,132.992,62.519)
N1: (108.776,132.283,59.040)
N3: (109.810,130.790,57.526)
N4: (109.650,131.140,55.273)
C6: (108.329,133.049,57.998)
C5: (108.602,132.719,56.733)
O3': (109.647,135.704,61.937)
OP1: (106.135,138.084,58.604)
OP2: (107.032,136.698,56.647)
C4: (109.362,131.537,56.515)
O5': (107.142,135.831,58.966)
C3': (109.120,134.821,60.950)
C1': (108.447,132.624,60.431)
O4': (107.294,133.450,60.435)
C5': (106.828,135.817,60.373)
P: (106.350,136.770,57.956)
O2: (109.987,130.506,59.761)
C4': (107.606,134.723,61.065)
C2': (109.554,133.377,61.163)
O2': (109.514,132.992,62.519)
N1: (108.776,132.283,59.040)
N3: (109.810,130.790,57.526)
N4: (109.650,131.140,55.273)
C6: (108.329,133.049,57.998)
C5: (108.602,132.719,56.733)
O3': (109.647,135.704,61.937)
Image (generated by PyMOL):