ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5H:52572:52216

Extra

PDB:
ATOM 1 O3' U A2571 145.055 -5.727 241.794 1.00 36.21 O
ATOM 2 P A A2572 145.173 -4.650 242.981 1.00 44.55 P
ATOM 3 OP1 A A2572 144.864 -5.358 244.273 1.00 44.54 O
ATOM 4 OP2 A A2572 144.347 -3.482 242.582 1.00 44.52 O
ATOM 5 O5' A A2572 146.729 -4.246 242.929 1.00 44.48 O
ATOM 6 C5' A A2572 147.740 -5.152 243.357 1.00 44.51 C
ATOM 7 C4' A A2572 149.077 -4.830 242.745 1.00 44.50 C
ATOM 8 O4' A A2572 149.057 -5.126 241.340 1.00 44.61 O
ATOM 9 C3' A A2572 149.500 -3.373 242.796 1.00 44.38 C
ATOM 10 O3' A A2572 150.052 -3.005 244.047 1.00 44.28 O
ATOM 11 C2' A A2572 150.488 -3.282 241.643 1.00 44.44 C
ATOM 12 O2' A A2572 151.714 -3.912 241.978 1.00 44.46 O
ATOM 13 C1' A A2572 149.799 -4.151 240.628 1.00 44.58 C
ATOM 14 N9 A A2572 148.891 -3.376 239.755 1.00 44.61 N
ATOM 15 C8 A A2572 147.536 -3.362 239.712 1.00 44.63 C
ATOM 16 N7 A A2572 147.009 -2.590 238.787 1.00 44.66 N
ATOM 17 C5 A A2572 148.113 -2.072 238.172 1.00 44.66 C
ATOM 18 C6 A A2572 148.226 -1.200 237.089 1.00 44.70 C
ATOM 19 N6 A A2572 147.204 -0.665 236.417 1.00 44.75 N
ATOM 20 N1 A A2572 149.475 -0.922 236.698 1.00 44.71 N
ATOM 21 C2 A A2572 150.510 -1.464 237.358 1.00 44.67 C
ATOM 22 N3 A A2572 150.506 -2.302 238.372 1.00 44.63 N
ATOM 23 C4 A A2572 149.264 -2.565 238.739 1.00 44.63 C
ATOM 24 P A A2573 149.926 -1.521 244.575 1.00 55.10 P
ATOM 25 OP1 A A2573 150.697 -1.472 245.822 1.00 55.04 O
ATOM 26 OP2 A A2573 148.499 -1.202 244.611 1.00 55.10 O
ATOM 27 O5' A A2573 150.633 -0.650 243.433 1.00 55.11 O
TER

ATOM 1 O3' A B2215 150.774 0.420 226.711 1.00115.74 O
ATOM 2 P C B2216 151.690 -0.478 227.688 1.00 58.52 P
ATOM 3 OP1 C B2216 152.984 -0.743 226.943 1.00 58.65 O
ATOM 4 OP2 C B2216 150.845 -1.680 228.127 1.00 58.53 O
ATOM 5 O5' C B2216 151.991 0.510 228.935 1.00 58.29 O
ATOM 6 C5' C B2216 153.330 0.706 229.413 1.00 58.22 C
ATOM 7 C4' C B2216 153.437 0.624 230.941 1.00 58.02 C
ATOM 8 O4' C B2216 152.479 1.517 231.574 1.00 57.89 O
ATOM 9 C3' C B2216 153.175 -0.731 231.590 1.00 58.01 C
ATOM 10 O3' C B2216 154.292 -1.597 231.540 1.00 58.08 O
ATOM 11 C2' C B2216 152.777 -0.345 233.009 1.00 57.82 C
ATOM 12 O2' C B2216 153.914 -0.075 233.780 1.00 57.72 O
ATOM 13 C1' C B2216 152.025 0.964 232.786 1.00 57.77 C
ATOM 14 N1 C B2216 150.552 0.760 232.693 1.00 57.79 N
ATOM 15 C2 C B2216 149.760 0.657 233.857 1.00 57.67 C
ATOM 16 O2 C B2216 150.264 0.743 234.961 1.00 57.54 O
ATOM 17 N3 C B2216 148.437 0.482 233.789 1.00 57.70 N
ATOM 18 C4 C B2216 147.884 0.402 232.598 1.00 57.85 C
ATOM 19 N4 C B2216 146.573 0.216 232.579 1.00 57.88 N
ATOM 20 C5 C B2216 148.629 0.495 231.388 1.00 57.98 C
ATOM 21 C6 C B2216 149.942 0.670 231.476 1.00 57.95 C
ATOM 22 P C B2217 154.127 -3.188 231.821 1.00 40.20 P
ATOM 23 OP1 C B2217 155.501 -3.765 232.098 1.00 40.23 O
ATOM 24 OP2 C B2217 153.337 -3.760 230.697 1.00 40.38 O
ATOM 25 O5' C B2217 153.262 -3.215 233.149 1.00 40.03 O
TER

Atoms:
OP1: (144.864,-5.358,244.273)
OP2: (144.347,-3.482,242.582)
C3': (149.500,-3.373,242.796)
C1': (149.799,-4.151,240.628)
C5': (147.740,-5.152,243.357)
O4': (149.057,-5.126,241.340)
C8: (147.536,-3.362,239.712)
O2': (151.714,-3.912,241.978)
C6: (148.226,-1.200,237.089)
C5: (148.113,-2.072,238.172)
C4: (149.264,-2.565,238.739)
P: (145.173,-4.650,242.981)
C4': (149.077,-4.830,242.745)
C2': (150.488,-3.282,241.643)
C2: (150.510,-1.464,237.358)
N1: (149.475,-0.922,236.698)
N3: (150.506,-2.302,238.372)
N6: (147.204,-0.665,236.417)
N7: (147.009,-2.590,238.787)
N9: (148.891,-3.376,239.755)
O5': (146.729,-4.246,242.929)
O3': (150.052,-3.005,244.047)
C2: (149.760,0.657,233.857)
OP1: (152.984,-0.743,226.943)
OP2: (150.845,-1.680,228.127)
C4: (147.884,0.402,232.598)
O5': (151.991,0.510,228.935)
C3': (153.175,-0.731,231.590)
C1': (152.025,0.964,232.786)
O4': (152.479,1.517,231.574)
C5': (153.330,0.706,229.413)
P: (151.690,-0.478,227.688)
O2: (150.264,0.743,234.961)
C4': (153.437,0.624,230.941)
C2': (152.777,-0.345,233.009)
O2': (153.914,-0.075,233.780)
N1: (150.552,0.760,232.693)
N3: (148.437,0.482,233.789)
N4: (146.573,0.216,232.579)
C6: (149.942,0.670,231.476)
C5: (148.629,0.495,231.388)
O3': (154.292,-1.597,231.540)
Image (generated by PyMOL):
PyMOL image
show in jmol