Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0430:030
Extra
PDB:
ATOM 1 O3' A A 429 53.890 128.020 36.991 1.00 56.07 O
ATOM 2 P A A 430 53.263 129.087 38.008 1.00 55.47 P
ATOM 3 OP1 A A 430 53.925 128.889 39.324 1.00 55.90 O
ATOM 4 OP2 A A 430 51.792 129.008 37.914 1.00 55.86 O
ATOM 5 O5' A A 430 53.701 130.486 37.394 1.00 55.78 O
ATOM 6 C5' A A 430 54.826 131.219 37.908 1.00 54.88 C
ATOM 7 C4' A A 430 55.494 131.967 36.787 1.00 55.17 C
ATOM 8 O4' A A 430 56.248 131.037 35.972 1.00 55.48 O
ATOM 9 C3' A A 430 54.519 132.607 35.820 1.00 55.26 C
ATOM 10 O3' A A 430 54.070 133.863 36.284 1.00 55.53 O
ATOM 11 C2' A A 430 55.333 132.701 34.545 1.00 56.62 C
ATOM 12 O2' A A 430 56.220 133.797 34.577 1.00 58.57 O
ATOM 13 C1' A A 430 56.127 131.392 34.603 1.00 57.08 C
ATOM 14 N9 A A 430 55.500 130.270 33.897 1.00 57.77 N
ATOM 15 C8 A A 430 55.087 129.078 34.438 1.00 58.72 C
ATOM 16 N7 A A 430 54.574 128.249 33.564 1.00 58.89 N
ATOM 17 C5 A A 430 54.652 128.939 32.366 1.00 58.30 C
ATOM 18 C6 A A 430 54.269 128.601 31.064 1.00 58.79 C
ATOM 19 N6 A A 430 53.718 127.434 30.739 1.00 60.47 N
ATOM 20 N1 A A 430 54.472 129.513 30.094 1.00 58.68 N
ATOM 21 C2 A A 430 55.024 130.682 30.425 1.00 58.24 C
ATOM 22 N3 A A 430 55.428 131.118 31.614 1.00 57.28 N
ATOM 23 C4 A A 430 55.213 130.187 32.555 1.00 57.68 C
ATOM 24 P C A 431 52.500 134.187 36.275 1.00 57.78 P
ATOM 25 OP1 C A 431 52.300 135.565 36.794 1.00 57.95 O
ATOM 26 OP2 C A 431 51.796 133.055 36.921 1.00 57.72 O
ATOM 27 O5' C A 431 52.129 134.176 34.729 1.00 57.56 O
TER
ATOM 1 O3' G B 29 48.060 124.635 22.722 1.00 53.01 O
ATOM 2 P C B 30 49.604 124.470 22.292 1.00 53.04 P
ATOM 3 OP1 C B 30 49.613 124.524 20.814 1.00 54.76 O
ATOM 4 OP2 C B 30 50.187 123.294 22.979 1.00 53.47 O
ATOM 5 O5' C B 30 50.330 125.779 22.846 1.00 52.43 O
ATOM 6 C5' C B 30 49.933 127.103 22.420 1.00 51.31 C
ATOM 7 C4' C B 30 50.545 128.153 23.326 1.00 50.28 C
ATOM 8 O4' C B 30 50.066 127.955 24.684 1.00 50.53 O
ATOM 9 C3' C B 30 52.058 128.107 23.446 1.00 50.58 C
ATOM 10 O3' C B 30 52.684 128.827 22.389 1.00 49.49 O
ATOM 11 C2' C B 30 52.302 128.739 24.811 1.00 51.36 C
ATOM 12 O2' C B 30 52.236 130.151 24.784 1.00 53.16 O
ATOM 13 C1' C B 30 51.116 128.193 25.609 1.00 51.26 C
ATOM 14 N1 C B 30 51.410 126.924 26.309 1.00 52.54 N
ATOM 15 C2 C B 30 52.125 126.950 27.523 1.00 52.67 C
ATOM 16 O2 C B 30 52.493 128.040 27.991 1.00 51.47 O
ATOM 17 N3 C B 30 52.394 125.780 28.149 1.00 53.16 N
ATOM 18 C4 C B 30 51.986 124.625 27.615 1.00 54.18 C
ATOM 19 N4 C B 30 52.285 123.493 28.253 1.00 54.81 N
ATOM 20 C5 C B 30 51.256 124.574 26.395 1.00 53.50 C
ATOM 21 C6 C B 30 50.993 125.732 25.783 1.00 53.03 C
ATOM 22 P G B 31 54.244 128.596 22.079 1.00 48.70 P
ATOM 23 OP1 G B 31 54.652 129.615 21.076 1.00 49.63 O
ATOM 24 OP2 G B 31 54.468 127.153 21.799 1.00 47.85 O
ATOM 25 O5' G B 31 54.975 128.958 23.444 1.00 48.20 O
TER
ATOM 2 P A A 430 53.263 129.087 38.008 1.00 55.47 P
ATOM 3 OP1 A A 430 53.925 128.889 39.324 1.00 55.90 O
ATOM 4 OP2 A A 430 51.792 129.008 37.914 1.00 55.86 O
ATOM 5 O5' A A 430 53.701 130.486 37.394 1.00 55.78 O
ATOM 6 C5' A A 430 54.826 131.219 37.908 1.00 54.88 C
ATOM 7 C4' A A 430 55.494 131.967 36.787 1.00 55.17 C
ATOM 8 O4' A A 430 56.248 131.037 35.972 1.00 55.48 O
ATOM 9 C3' A A 430 54.519 132.607 35.820 1.00 55.26 C
ATOM 10 O3' A A 430 54.070 133.863 36.284 1.00 55.53 O
ATOM 11 C2' A A 430 55.333 132.701 34.545 1.00 56.62 C
ATOM 12 O2' A A 430 56.220 133.797 34.577 1.00 58.57 O
ATOM 13 C1' A A 430 56.127 131.392 34.603 1.00 57.08 C
ATOM 14 N9 A A 430 55.500 130.270 33.897 1.00 57.77 N
ATOM 15 C8 A A 430 55.087 129.078 34.438 1.00 58.72 C
ATOM 16 N7 A A 430 54.574 128.249 33.564 1.00 58.89 N
ATOM 17 C5 A A 430 54.652 128.939 32.366 1.00 58.30 C
ATOM 18 C6 A A 430 54.269 128.601 31.064 1.00 58.79 C
ATOM 19 N6 A A 430 53.718 127.434 30.739 1.00 60.47 N
ATOM 20 N1 A A 430 54.472 129.513 30.094 1.00 58.68 N
ATOM 21 C2 A A 430 55.024 130.682 30.425 1.00 58.24 C
ATOM 22 N3 A A 430 55.428 131.118 31.614 1.00 57.28 N
ATOM 23 C4 A A 430 55.213 130.187 32.555 1.00 57.68 C
ATOM 24 P C A 431 52.500 134.187 36.275 1.00 57.78 P
ATOM 25 OP1 C A 431 52.300 135.565 36.794 1.00 57.95 O
ATOM 26 OP2 C A 431 51.796 133.055 36.921 1.00 57.72 O
ATOM 27 O5' C A 431 52.129 134.176 34.729 1.00 57.56 O
TER
ATOM 1 O3' G B 29 48.060 124.635 22.722 1.00 53.01 O
ATOM 2 P C B 30 49.604 124.470 22.292 1.00 53.04 P
ATOM 3 OP1 C B 30 49.613 124.524 20.814 1.00 54.76 O
ATOM 4 OP2 C B 30 50.187 123.294 22.979 1.00 53.47 O
ATOM 5 O5' C B 30 50.330 125.779 22.846 1.00 52.43 O
ATOM 6 C5' C B 30 49.933 127.103 22.420 1.00 51.31 C
ATOM 7 C4' C B 30 50.545 128.153 23.326 1.00 50.28 C
ATOM 8 O4' C B 30 50.066 127.955 24.684 1.00 50.53 O
ATOM 9 C3' C B 30 52.058 128.107 23.446 1.00 50.58 C
ATOM 10 O3' C B 30 52.684 128.827 22.389 1.00 49.49 O
ATOM 11 C2' C B 30 52.302 128.739 24.811 1.00 51.36 C
ATOM 12 O2' C B 30 52.236 130.151 24.784 1.00 53.16 O
ATOM 13 C1' C B 30 51.116 128.193 25.609 1.00 51.26 C
ATOM 14 N1 C B 30 51.410 126.924 26.309 1.00 52.54 N
ATOM 15 C2 C B 30 52.125 126.950 27.523 1.00 52.67 C
ATOM 16 O2 C B 30 52.493 128.040 27.991 1.00 51.47 O
ATOM 17 N3 C B 30 52.394 125.780 28.149 1.00 53.16 N
ATOM 18 C4 C B 30 51.986 124.625 27.615 1.00 54.18 C
ATOM 19 N4 C B 30 52.285 123.493 28.253 1.00 54.81 N
ATOM 20 C5 C B 30 51.256 124.574 26.395 1.00 53.50 C
ATOM 21 C6 C B 30 50.993 125.732 25.783 1.00 53.03 C
ATOM 22 P G B 31 54.244 128.596 22.079 1.00 48.70 P
ATOM 23 OP1 G B 31 54.652 129.615 21.076 1.00 49.63 O
ATOM 24 OP2 G B 31 54.468 127.153 21.799 1.00 47.85 O
ATOM 25 O5' G B 31 54.975 128.958 23.444 1.00 48.20 O
TER
Atoms:
OP1: (53.925,128.889,39.324)
OP2: (51.792,129.008,37.914)
C3': (54.519,132.607,35.820)
C1': (56.127,131.392,34.603)
C5': (54.826,131.219,37.908)
O4': (56.248,131.037,35.972)
C8: (55.087,129.078,34.438)
O2': (56.220,133.797,34.577)
C6: (54.269,128.601,31.064)
C5: (54.652,128.939,32.366)
C4: (55.213,130.187,32.555)
P: (53.263,129.087,38.008)
C4': (55.494,131.967,36.787)
C2': (55.333,132.701,34.545)
C2: (55.024,130.682,30.425)
N1: (54.472,129.513,30.094)
N3: (55.428,131.118,31.614)
N6: (53.718,127.434,30.739)
N7: (54.574,128.249,33.564)
N9: (55.500,130.270,33.897)
O5': (53.701,130.486,37.394)
O3': (54.070,133.863,36.284)
OP2: (51.792,129.008,37.914)
C3': (54.519,132.607,35.820)
C1': (56.127,131.392,34.603)
C5': (54.826,131.219,37.908)
O4': (56.248,131.037,35.972)
C8: (55.087,129.078,34.438)
O2': (56.220,133.797,34.577)
C6: (54.269,128.601,31.064)
C5: (54.652,128.939,32.366)
C4: (55.213,130.187,32.555)
P: (53.263,129.087,38.008)
C4': (55.494,131.967,36.787)
C2': (55.333,132.701,34.545)
C2: (55.024,130.682,30.425)
N1: (54.472,129.513,30.094)
N3: (55.428,131.118,31.614)
N6: (53.718,127.434,30.739)
N7: (54.574,128.249,33.564)
N9: (55.500,130.270,33.897)
O5': (53.701,130.486,37.394)
O3': (54.070,133.863,36.284)
C2: (52.125,126.950,27.523)
OP1: (49.613,124.524,20.814)
OP2: (50.187,123.294,22.979)
C4: (51.986,124.625,27.615)
O5': (50.330,125.779,22.846)
C3': (52.058,128.107,23.446)
C1': (51.116,128.193,25.609)
O4': (50.066,127.955,24.684)
C5': (49.933,127.103,22.420)
P: (49.604,124.470,22.292)
O2: (52.493,128.040,27.991)
C4': (50.545,128.153,23.326)
C2': (52.302,128.739,24.811)
O2': (52.236,130.151,24.784)
N1: (51.410,126.924,26.309)
N3: (52.394,125.780,28.149)
N4: (52.285,123.493,28.253)
C6: (50.993,125.732,25.783)
C5: (51.256,124.574,26.395)
O3': (52.684,128.827,22.389)
OP1: (49.613,124.524,20.814)
OP2: (50.187,123.294,22.979)
C4: (51.986,124.625,27.615)
O5': (50.330,125.779,22.846)
C3': (52.058,128.107,23.446)
C1': (51.116,128.193,25.609)
O4': (50.066,127.955,24.684)
C5': (49.933,127.103,22.420)
P: (49.604,124.470,22.292)
O2: (52.493,128.040,27.991)
C4': (50.545,128.153,23.326)
C2': (52.302,128.739,24.811)
O2': (52.236,130.151,24.784)
N1: (51.410,126.924,26.309)
N3: (52.394,125.780,28.149)
N4: (52.285,123.493,28.253)
C6: (50.993,125.732,25.783)
C5: (51.256,124.574,26.395)
O3': (52.684,128.827,22.389)
Image (generated by PyMOL):