Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RG5:B39:B33
Extra
PDB:
ATOM 1 O3' A A 38 4.241 -21.417 7.655 1.00 39.00 O
ATOM 2 P A A 39 4.514 -20.041 6.902 1.00 38.01 P
ATOM 3 OP1 A A 39 5.824 -19.669 7.467 1.00 41.04 O
ATOM 4 OP2 A A 39 3.352 -19.142 6.969 1.00 40.09 O
ATOM 5 O5' A A 39 4.696 -20.532 5.393 1.00 39.07 O
ATOM 6 C5' A A 39 4.047 -19.891 4.319 1.00 38.57 C
ATOM 7 C4' A A 39 3.159 -20.883 3.602 1.00 35.40 C
ATOM 8 O4' A A 39 2.122 -21.293 4.536 1.00 34.19 O
ATOM 9 C3' A A 39 2.408 -20.211 2.473 1.00 35.48 C
ATOM 10 O3' A A 39 3.082 -20.316 1.267 1.00 37.18 O
ATOM 11 C2' A A 39 1.093 -20.982 2.442 1.00 35.17 C
ATOM 12 O2' A A 39 1.201 -22.235 1.846 1.00 31.89 O
ATOM 13 C1' A A 39 0.846 -21.210 3.912 1.00 35.29 C
ATOM 14 N9 A A 39 0.008 -20.173 4.535 1.00 35.66 N
ATOM 15 C8 A A 39 0.379 -19.273 5.504 1.00 35.92 C
ATOM 16 N7 A A 39 -0.587 -18.473 5.898 1.00 35.99 N
ATOM 17 C5 A A 39 -1.676 -18.869 5.146 1.00 36.15 C
ATOM 18 C6 A A 39 -3.013 -18.425 5.110 1.00 33.71 C
ATOM 19 N6 A A 39 -3.488 -17.434 5.870 1.00 31.81 N
ATOM 20 N1 A A 39 -3.855 -19.046 4.253 1.00 35.01 N
ATOM 21 C2 A A 39 -3.393 -20.049 3.490 1.00 35.41 C
ATOM 22 N3 A A 39 -2.157 -20.561 3.453 1.00 34.65 N
ATOM 23 C4 A A 39 -1.333 -19.928 4.304 1.00 36.27 C
ATOM 24 P C A 40 3.199 -19.058 0.276 1.00 40.24 P
ATOM 25 OP1 C A 40 4.053 -19.489 -0.863 1.00 36.82 O
ATOM 26 OP2 C A 40 3.459 -17.869 1.087 1.00 39.21 O
ATOM 27 O5' C A 40 1.763 -18.840 -0.362 1.00 40.25 O
TER
ATOM 1 O3' G B 32 -12.640 -13.829 4.549 1.00 25.84 O
ATOM 2 P C B 33 -12.840 -15.162 5.395 1.00 26.65 P
ATOM 3 OP1 C B 33 -14.290 -15.365 5.335 1.00 25.19 O
ATOM 4 OP2 C B 33 -12.235 -15.110 6.695 1.00 26.04 O
ATOM 5 O5' C B 33 -11.952 -16.204 4.560 1.00 27.11 O
ATOM 6 C5' C B 33 -12.192 -16.426 3.156 1.00 25.00 C
ATOM 7 C4' C B 33 -11.086 -17.287 2.585 1.00 26.90 C
ATOM 8 O4' C B 33 -9.821 -16.595 2.727 1.00 26.23 O
ATOM 9 C3' C B 33 -10.858 -18.598 3.353 1.00 26.97 C
ATOM 10 O3' C B 33 -11.754 -19.561 2.857 1.00 29.26 O
ATOM 11 C2' C B 33 -9.396 -18.922 3.054 1.00 25.13 C
ATOM 12 O2' C B 33 -9.226 -19.368 1.730 1.00 23.80 O
ATOM 13 C1' C B 33 -8.799 -17.507 3.105 1.00 26.74 C
ATOM 14 N1 C B 33 -8.229 -17.024 4.401 1.00 26.81 N
ATOM 15 C2 C B 33 -6.916 -17.384 4.643 1.00 26.40 C
ATOM 16 O2 C B 33 -6.336 -18.084 3.801 1.00 26.31 O
ATOM 17 N3 C B 33 -6.300 -16.930 5.743 1.00 26.51 N
ATOM 18 C4 C B 33 -6.950 -16.182 6.609 1.00 25.94 C
ATOM 19 N4 C B 33 -6.245 -15.833 7.686 1.00 26.66 N
ATOM 20 C5 C B 33 -8.315 -15.790 6.398 1.00 26.21 C
ATOM 21 C6 C B 33 -8.907 -16.231 5.271 1.00 25.88 C
ATOM 22 P U B 34 -12.346 -20.670 3.828 1.00 32.44 P
ATOM 23 OP1 U B 34 -13.331 -21.306 2.950 1.00 36.15 O
ATOM 24 OP2 U B 34 -12.618 -20.260 5.212 1.00 30.34 O
ATOM 25 O5' U B 34 -11.089 -21.664 4.035 1.00 31.39 O
TER
ATOM 2 P A A 39 4.514 -20.041 6.902 1.00 38.01 P
ATOM 3 OP1 A A 39 5.824 -19.669 7.467 1.00 41.04 O
ATOM 4 OP2 A A 39 3.352 -19.142 6.969 1.00 40.09 O
ATOM 5 O5' A A 39 4.696 -20.532 5.393 1.00 39.07 O
ATOM 6 C5' A A 39 4.047 -19.891 4.319 1.00 38.57 C
ATOM 7 C4' A A 39 3.159 -20.883 3.602 1.00 35.40 C
ATOM 8 O4' A A 39 2.122 -21.293 4.536 1.00 34.19 O
ATOM 9 C3' A A 39 2.408 -20.211 2.473 1.00 35.48 C
ATOM 10 O3' A A 39 3.082 -20.316 1.267 1.00 37.18 O
ATOM 11 C2' A A 39 1.093 -20.982 2.442 1.00 35.17 C
ATOM 12 O2' A A 39 1.201 -22.235 1.846 1.00 31.89 O
ATOM 13 C1' A A 39 0.846 -21.210 3.912 1.00 35.29 C
ATOM 14 N9 A A 39 0.008 -20.173 4.535 1.00 35.66 N
ATOM 15 C8 A A 39 0.379 -19.273 5.504 1.00 35.92 C
ATOM 16 N7 A A 39 -0.587 -18.473 5.898 1.00 35.99 N
ATOM 17 C5 A A 39 -1.676 -18.869 5.146 1.00 36.15 C
ATOM 18 C6 A A 39 -3.013 -18.425 5.110 1.00 33.71 C
ATOM 19 N6 A A 39 -3.488 -17.434 5.870 1.00 31.81 N
ATOM 20 N1 A A 39 -3.855 -19.046 4.253 1.00 35.01 N
ATOM 21 C2 A A 39 -3.393 -20.049 3.490 1.00 35.41 C
ATOM 22 N3 A A 39 -2.157 -20.561 3.453 1.00 34.65 N
ATOM 23 C4 A A 39 -1.333 -19.928 4.304 1.00 36.27 C
ATOM 24 P C A 40 3.199 -19.058 0.276 1.00 40.24 P
ATOM 25 OP1 C A 40 4.053 -19.489 -0.863 1.00 36.82 O
ATOM 26 OP2 C A 40 3.459 -17.869 1.087 1.00 39.21 O
ATOM 27 O5' C A 40 1.763 -18.840 -0.362 1.00 40.25 O
TER
ATOM 1 O3' G B 32 -12.640 -13.829 4.549 1.00 25.84 O
ATOM 2 P C B 33 -12.840 -15.162 5.395 1.00 26.65 P
ATOM 3 OP1 C B 33 -14.290 -15.365 5.335 1.00 25.19 O
ATOM 4 OP2 C B 33 -12.235 -15.110 6.695 1.00 26.04 O
ATOM 5 O5' C B 33 -11.952 -16.204 4.560 1.00 27.11 O
ATOM 6 C5' C B 33 -12.192 -16.426 3.156 1.00 25.00 C
ATOM 7 C4' C B 33 -11.086 -17.287 2.585 1.00 26.90 C
ATOM 8 O4' C B 33 -9.821 -16.595 2.727 1.00 26.23 O
ATOM 9 C3' C B 33 -10.858 -18.598 3.353 1.00 26.97 C
ATOM 10 O3' C B 33 -11.754 -19.561 2.857 1.00 29.26 O
ATOM 11 C2' C B 33 -9.396 -18.922 3.054 1.00 25.13 C
ATOM 12 O2' C B 33 -9.226 -19.368 1.730 1.00 23.80 O
ATOM 13 C1' C B 33 -8.799 -17.507 3.105 1.00 26.74 C
ATOM 14 N1 C B 33 -8.229 -17.024 4.401 1.00 26.81 N
ATOM 15 C2 C B 33 -6.916 -17.384 4.643 1.00 26.40 C
ATOM 16 O2 C B 33 -6.336 -18.084 3.801 1.00 26.31 O
ATOM 17 N3 C B 33 -6.300 -16.930 5.743 1.00 26.51 N
ATOM 18 C4 C B 33 -6.950 -16.182 6.609 1.00 25.94 C
ATOM 19 N4 C B 33 -6.245 -15.833 7.686 1.00 26.66 N
ATOM 20 C5 C B 33 -8.315 -15.790 6.398 1.00 26.21 C
ATOM 21 C6 C B 33 -8.907 -16.231 5.271 1.00 25.88 C
ATOM 22 P U B 34 -12.346 -20.670 3.828 1.00 32.44 P
ATOM 23 OP1 U B 34 -13.331 -21.306 2.950 1.00 36.15 O
ATOM 24 OP2 U B 34 -12.618 -20.260 5.212 1.00 30.34 O
ATOM 25 O5' U B 34 -11.089 -21.664 4.035 1.00 31.39 O
TER
Atoms:
OP1: (5.824,-19.669,7.467)
OP2: (3.352,-19.142,6.969)
C3': (2.408,-20.211,2.473)
C1': (0.846,-21.210,3.912)
C5': (4.047,-19.891,4.319)
O4': (2.122,-21.293,4.536)
C8: (0.379,-19.273,5.504)
O2': (1.201,-22.235,1.846)
C6: (-3.013,-18.425,5.110)
C5: (-1.676,-18.869,5.146)
C4: (-1.333,-19.928,4.304)
P: (4.514,-20.041,6.902)
C4': (3.159,-20.883,3.602)
C2': (1.093,-20.982,2.442)
C2: (-3.393,-20.049,3.490)
N1: (-3.855,-19.046,4.253)
N3: (-2.157,-20.561,3.453)
N6: (-3.488,-17.434,5.870)
N7: (-0.587,-18.473,5.898)
N9: (0.008,-20.173,4.535)
O5': (4.696,-20.532,5.393)
O3': (3.082,-20.316,1.267)
OP2: (3.352,-19.142,6.969)
C3': (2.408,-20.211,2.473)
C1': (0.846,-21.210,3.912)
C5': (4.047,-19.891,4.319)
O4': (2.122,-21.293,4.536)
C8: (0.379,-19.273,5.504)
O2': (1.201,-22.235,1.846)
C6: (-3.013,-18.425,5.110)
C5: (-1.676,-18.869,5.146)
C4: (-1.333,-19.928,4.304)
P: (4.514,-20.041,6.902)
C4': (3.159,-20.883,3.602)
C2': (1.093,-20.982,2.442)
C2: (-3.393,-20.049,3.490)
N1: (-3.855,-19.046,4.253)
N3: (-2.157,-20.561,3.453)
N6: (-3.488,-17.434,5.870)
N7: (-0.587,-18.473,5.898)
N9: (0.008,-20.173,4.535)
O5': (4.696,-20.532,5.393)
O3': (3.082,-20.316,1.267)
C2: (-6.916,-17.384,4.643)
OP1: (-14.290,-15.365,5.335)
OP2: (-12.235,-15.110,6.695)
C4: (-6.950,-16.182,6.609)
O5': (-11.952,-16.204,4.560)
C3': (-10.858,-18.598,3.353)
C1': (-8.799,-17.507,3.105)
O4': (-9.821,-16.595,2.727)
C5': (-12.192,-16.426,3.156)
P: (-12.840,-15.162,5.395)
O2: (-6.336,-18.084,3.801)
C4': (-11.086,-17.287,2.585)
C2': (-9.396,-18.922,3.054)
O2': (-9.226,-19.368,1.730)
N1: (-8.229,-17.024,4.401)
N3: (-6.300,-16.930,5.743)
N4: (-6.245,-15.833,7.686)
C6: (-8.907,-16.231,5.271)
C5: (-8.315,-15.790,6.398)
O3': (-11.754,-19.561,2.857)
OP1: (-14.290,-15.365,5.335)
OP2: (-12.235,-15.110,6.695)
C4: (-6.950,-16.182,6.609)
O5': (-11.952,-16.204,4.560)
C3': (-10.858,-18.598,3.353)
C1': (-8.799,-17.507,3.105)
O4': (-9.821,-16.595,2.727)
C5': (-12.192,-16.426,3.156)
P: (-12.840,-15.162,5.395)
O2: (-6.336,-18.084,3.801)
C4': (-11.086,-17.287,2.585)
C2': (-9.396,-18.922,3.054)
O2': (-9.226,-19.368,1.730)
N1: (-8.229,-17.024,4.401)
N3: (-6.300,-16.930,5.743)
N4: (-6.245,-15.833,7.686)
C6: (-8.907,-16.231,5.271)
C5: (-8.315,-15.790,6.398)
O3': (-11.754,-19.561,2.857)
Image (generated by PyMOL):