Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1DDY:A16:A28
Extra
PDB:
ATOM 1 O3' A A 15 27.450 -12.765 3.029 1.00 35.82 O
ATOM 2 P A A 16 28.587 -12.421 4.111 1.00 36.76 P
ATOM 3 OP1 A A 16 29.568 -13.537 4.122 1.00 36.60 O
ATOM 4 OP2 A A 16 27.918 -12.023 5.371 1.00 33.44 O
ATOM 5 O5' A A 16 29.296 -11.120 3.519 1.00 35.91 O
ATOM 6 C5' A A 16 29.771 -11.070 2.173 1.00 32.02 C
ATOM 7 C4' A A 16 30.219 -9.667 1.849 1.00 30.47 C
ATOM 8 O4' A A 16 29.063 -8.789 1.847 1.00 30.49 O
ATOM 9 C3' A A 16 31.151 -9.055 2.882 1.00 30.57 C
ATOM 10 O3' A A 16 32.500 -9.444 2.697 1.00 30.31 O
ATOM 11 C2' A A 16 30.914 -7.561 2.709 1.00 30.15 C
ATOM 12 O2' A A 16 31.607 -6.988 1.620 1.00 30.63 O
ATOM 13 C1' A A 16 29.411 -7.539 2.430 1.00 30.11 C
ATOM 14 N9 A A 16 28.625 -7.373 3.649 1.00 29.44 N
ATOM 15 C8 A A 16 27.762 -8.273 4.224 1.00 31.47 C
ATOM 16 N7 A A 16 27.172 -7.821 5.305 1.00 31.70 N
ATOM 17 C5 A A 16 27.688 -6.540 5.456 1.00 30.77 C
ATOM 18 C6 A A 16 27.460 -5.529 6.407 1.00 29.95 C
ATOM 19 N6 A A 16 26.600 -5.644 7.421 1.00 30.34 N
ATOM 20 N1 A A 16 28.148 -4.376 6.278 1.00 28.20 N
ATOM 21 C2 A A 16 28.998 -4.256 5.261 1.00 26.09 C
ATOM 22 N3 A A 16 29.294 -5.127 4.300 1.00 28.10 N
ATOM 23 C4 A A 16 28.595 -6.260 4.452 1.00 29.43 C
ATOM 24 P C A 17 33.440 -9.623 3.981 1.00 30.45 P
ATOM 25 OP1 C A 17 34.825 -9.975 3.553 1.00 28.86 O
ATOM 26 OP2 C A 17 32.694 -10.531 4.893 1.00 29.77 O
ATOM 27 O5' C A 17 33.471 -8.167 4.617 1.00 22.47 O
TER
ATOM 1 O3' G B 27 26.153 -0.116 16.435 1.00 30.93 O
ATOM 2 P C B 28 24.817 0.454 15.765 1.00 30.85 P
ATOM 3 OP1 C B 28 24.818 1.915 16.045 1.00 29.97 O
ATOM 4 OP2 C B 28 23.675 -0.382 16.216 1.00 32.87 O
ATOM 5 O5' C B 28 25.055 0.191 14.216 1.00 25.08 O
ATOM 6 C5' C B 28 26.099 0.871 13.547 1.00 25.81 C
ATOM 7 C4' C B 28 26.189 0.418 12.120 1.00 26.26 C
ATOM 8 O4' C B 28 26.690 -0.936 12.061 1.00 25.30 O
ATOM 9 C3' C B 28 24.873 0.346 11.370 1.00 26.92 C
ATOM 10 O3' C B 28 24.425 1.611 10.914 1.00 29.40 O
ATOM 11 C2' C B 28 25.221 -0.570 10.211 1.00 26.13 C
ATOM 12 O2' C B 28 25.812 0.124 9.133 1.00 25.60 O
ATOM 13 C1' C B 28 26.202 -1.546 10.882 1.00 25.25 C
ATOM 14 N1 C B 28 25.519 -2.781 11.252 1.00 26.04 N
ATOM 15 C2 C B 28 25.457 -3.809 10.304 1.00 28.40 C
ATOM 16 O2 C B 28 26.042 -3.659 9.215 1.00 27.82 O
ATOM 17 N3 C B 28 24.766 -4.931 10.591 1.00 28.88 N
ATOM 18 C4 C B 28 24.150 -5.048 11.764 1.00 27.49 C
ATOM 19 N4 C B 28 23.441 -6.153 11.972 1.00 31.03 N
ATOM 20 C5 C B 28 24.226 -4.029 12.768 1.00 25.29 C
ATOM 21 C6 C B 28 24.920 -2.925 12.473 1.00 24.84 C
ATOM 22 P G B 29 22.947 1.750 10.303 1.00 32.96 P
ATOM 23 OP1 G B 29 22.945 1.058 8.975 1.00 31.12 O
ATOM 24 OP2 G B 29 22.577 3.182 10.392 1.00 33.28 O
ATOM 25 O5' G B 29 22.031 0.934 11.324 1.00 31.33 O
TER
ATOM 2 P A A 16 28.587 -12.421 4.111 1.00 36.76 P
ATOM 3 OP1 A A 16 29.568 -13.537 4.122 1.00 36.60 O
ATOM 4 OP2 A A 16 27.918 -12.023 5.371 1.00 33.44 O
ATOM 5 O5' A A 16 29.296 -11.120 3.519 1.00 35.91 O
ATOM 6 C5' A A 16 29.771 -11.070 2.173 1.00 32.02 C
ATOM 7 C4' A A 16 30.219 -9.667 1.849 1.00 30.47 C
ATOM 8 O4' A A 16 29.063 -8.789 1.847 1.00 30.49 O
ATOM 9 C3' A A 16 31.151 -9.055 2.882 1.00 30.57 C
ATOM 10 O3' A A 16 32.500 -9.444 2.697 1.00 30.31 O
ATOM 11 C2' A A 16 30.914 -7.561 2.709 1.00 30.15 C
ATOM 12 O2' A A 16 31.607 -6.988 1.620 1.00 30.63 O
ATOM 13 C1' A A 16 29.411 -7.539 2.430 1.00 30.11 C
ATOM 14 N9 A A 16 28.625 -7.373 3.649 1.00 29.44 N
ATOM 15 C8 A A 16 27.762 -8.273 4.224 1.00 31.47 C
ATOM 16 N7 A A 16 27.172 -7.821 5.305 1.00 31.70 N
ATOM 17 C5 A A 16 27.688 -6.540 5.456 1.00 30.77 C
ATOM 18 C6 A A 16 27.460 -5.529 6.407 1.00 29.95 C
ATOM 19 N6 A A 16 26.600 -5.644 7.421 1.00 30.34 N
ATOM 20 N1 A A 16 28.148 -4.376 6.278 1.00 28.20 N
ATOM 21 C2 A A 16 28.998 -4.256 5.261 1.00 26.09 C
ATOM 22 N3 A A 16 29.294 -5.127 4.300 1.00 28.10 N
ATOM 23 C4 A A 16 28.595 -6.260 4.452 1.00 29.43 C
ATOM 24 P C A 17 33.440 -9.623 3.981 1.00 30.45 P
ATOM 25 OP1 C A 17 34.825 -9.975 3.553 1.00 28.86 O
ATOM 26 OP2 C A 17 32.694 -10.531 4.893 1.00 29.77 O
ATOM 27 O5' C A 17 33.471 -8.167 4.617 1.00 22.47 O
TER
ATOM 1 O3' G B 27 26.153 -0.116 16.435 1.00 30.93 O
ATOM 2 P C B 28 24.817 0.454 15.765 1.00 30.85 P
ATOM 3 OP1 C B 28 24.818 1.915 16.045 1.00 29.97 O
ATOM 4 OP2 C B 28 23.675 -0.382 16.216 1.00 32.87 O
ATOM 5 O5' C B 28 25.055 0.191 14.216 1.00 25.08 O
ATOM 6 C5' C B 28 26.099 0.871 13.547 1.00 25.81 C
ATOM 7 C4' C B 28 26.189 0.418 12.120 1.00 26.26 C
ATOM 8 O4' C B 28 26.690 -0.936 12.061 1.00 25.30 O
ATOM 9 C3' C B 28 24.873 0.346 11.370 1.00 26.92 C
ATOM 10 O3' C B 28 24.425 1.611 10.914 1.00 29.40 O
ATOM 11 C2' C B 28 25.221 -0.570 10.211 1.00 26.13 C
ATOM 12 O2' C B 28 25.812 0.124 9.133 1.00 25.60 O
ATOM 13 C1' C B 28 26.202 -1.546 10.882 1.00 25.25 C
ATOM 14 N1 C B 28 25.519 -2.781 11.252 1.00 26.04 N
ATOM 15 C2 C B 28 25.457 -3.809 10.304 1.00 28.40 C
ATOM 16 O2 C B 28 26.042 -3.659 9.215 1.00 27.82 O
ATOM 17 N3 C B 28 24.766 -4.931 10.591 1.00 28.88 N
ATOM 18 C4 C B 28 24.150 -5.048 11.764 1.00 27.49 C
ATOM 19 N4 C B 28 23.441 -6.153 11.972 1.00 31.03 N
ATOM 20 C5 C B 28 24.226 -4.029 12.768 1.00 25.29 C
ATOM 21 C6 C B 28 24.920 -2.925 12.473 1.00 24.84 C
ATOM 22 P G B 29 22.947 1.750 10.303 1.00 32.96 P
ATOM 23 OP1 G B 29 22.945 1.058 8.975 1.00 31.12 O
ATOM 24 OP2 G B 29 22.577 3.182 10.392 1.00 33.28 O
ATOM 25 O5' G B 29 22.031 0.934 11.324 1.00 31.33 O
TER
Atoms:
OP1: (29.568,-13.537,4.122)
OP2: (27.918,-12.023,5.371)
C3': (31.151,-9.055,2.882)
C1': (29.411,-7.539,2.430)
C5': (29.771,-11.070,2.173)
O4': (29.063,-8.789,1.847)
C8: (27.762,-8.273,4.224)
O2': (31.607,-6.988,1.620)
C6: (27.460,-5.529,6.407)
C5: (27.688,-6.540,5.456)
C4: (28.595,-6.260,4.452)
P: (28.587,-12.421,4.111)
C4': (30.219,-9.667,1.849)
C2': (30.914,-7.561,2.709)
C2: (28.998,-4.256,5.261)
N1: (28.148,-4.376,6.278)
N3: (29.294,-5.127,4.300)
N6: (26.600,-5.644,7.421)
N7: (27.172,-7.821,5.305)
N9: (28.625,-7.373,3.649)
O5': (29.296,-11.120,3.519)
O3': (32.500,-9.444,2.697)
OP2: (27.918,-12.023,5.371)
C3': (31.151,-9.055,2.882)
C1': (29.411,-7.539,2.430)
C5': (29.771,-11.070,2.173)
O4': (29.063,-8.789,1.847)
C8: (27.762,-8.273,4.224)
O2': (31.607,-6.988,1.620)
C6: (27.460,-5.529,6.407)
C5: (27.688,-6.540,5.456)
C4: (28.595,-6.260,4.452)
P: (28.587,-12.421,4.111)
C4': (30.219,-9.667,1.849)
C2': (30.914,-7.561,2.709)
C2: (28.998,-4.256,5.261)
N1: (28.148,-4.376,6.278)
N3: (29.294,-5.127,4.300)
N6: (26.600,-5.644,7.421)
N7: (27.172,-7.821,5.305)
N9: (28.625,-7.373,3.649)
O5': (29.296,-11.120,3.519)
O3': (32.500,-9.444,2.697)
C2: (25.457,-3.809,10.304)
OP1: (24.818,1.915,16.045)
OP2: (23.675,-0.382,16.216)
C4: (24.150,-5.048,11.764)
O5': (25.055,0.191,14.216)
C3': (24.873,0.346,11.370)
C1': (26.202,-1.546,10.882)
O4': (26.690,-0.936,12.061)
C5': (26.099,0.871,13.547)
P: (24.817,0.454,15.765)
O2: (26.042,-3.659,9.215)
C4': (26.189,0.418,12.120)
C2': (25.221,-0.570,10.211)
O2': (25.812,0.124,9.133)
N1: (25.519,-2.781,11.252)
N3: (24.766,-4.931,10.591)
N4: (23.441,-6.153,11.972)
C6: (24.920,-2.925,12.473)
C5: (24.226,-4.029,12.768)
O3': (24.425,1.611,10.914)
OP1: (24.818,1.915,16.045)
OP2: (23.675,-0.382,16.216)
C4: (24.150,-5.048,11.764)
O5': (25.055,0.191,14.216)
C3': (24.873,0.346,11.370)
C1': (26.202,-1.546,10.882)
O4': (26.690,-0.936,12.061)
C5': (26.099,0.871,13.547)
P: (24.817,0.454,15.765)
O2: (26.042,-3.659,9.215)
C4': (26.189,0.418,12.120)
C2': (25.221,-0.570,10.211)
O2': (25.812,0.124,9.133)
N1: (25.519,-2.781,11.252)
N3: (24.766,-4.931,10.591)
N4: (23.441,-6.153,11.972)
C6: (24.920,-2.925,12.473)
C5: (24.226,-4.029,12.768)
O3': (24.425,1.611,10.914)
Image (generated by PyMOL):