Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M5P:E6:P2
Extra
PDB:
ATOM 1 O3' G A 5 10.365 28.153 130.816 1.00122.07 O
ATOM 2 P A A 6 8.991 28.300 129.994 1.00135.69 P
ATOM 3 OP1 A A 6 7.951 28.822 130.915 1.00132.94 O
ATOM 4 OP2 A A 6 8.754 27.018 129.279 1.00112.45 O
ATOM 5 O5' A A 6 9.323 29.426 128.912 1.00124.97 O
ATOM 6 C5' A A 6 9.775 30.715 129.320 1.00113.40 C
ATOM 7 C4' A A 6 10.408 31.447 128.158 1.00123.95 C
ATOM 8 O4' A A 6 11.616 30.751 127.739 1.00125.94 O
ATOM 9 C3' A A 6 9.576 31.528 126.889 1.00127.22 C
ATOM 10 O3' A A 6 8.626 32.584 126.944 1.00125.58 O
ATOM 11 C2' A A 6 10.648 31.762 125.834 1.00121.22 C
ATOM 12 O2' A A 6 11.127 33.092 125.828 1.00125.30 O
ATOM 13 C1' A A 6 11.744 30.817 126.325 1.00118.51 C
ATOM 14 N9 A A 6 11.565 29.467 125.791 1.00114.18 N
ATOM 15 C8 A A 6 10.918 28.407 126.383 1.00113.51 C
ATOM 16 N7 A A 6 10.891 27.324 125.645 1.00109.70 N
ATOM 17 C5 A A 6 11.570 27.690 124.494 1.00106.78 C
ATOM 18 C6 A A 6 11.883 26.988 123.325 1.00104.93 C
ATOM 19 N6 A A 6 11.539 25.717 123.113 1.00 98.53 N
ATOM 20 N1 A A 6 12.573 27.642 122.366 1.00107.53 N
ATOM 21 C2 A A 6 12.920 28.918 122.582 1.00108.62 C
ATOM 22 N3 A A 6 12.685 29.687 123.641 1.00109.53 N
ATOM 23 C4 A A 6 11.997 29.005 124.572 1.00110.22 C
ATOM 24 P G A 7 7.154 32.357 126.339 1.00118.46 P
ATOM 25 OP1 G A 7 6.389 33.611 126.538 1.00132.48 O
ATOM 26 OP2 G A 7 6.620 31.079 126.878 1.00 84.63 O
ATOM 27 O5' G A 7 7.405 32.169 124.778 1.00120.83 O
TER
ATOM 1 O3' U B 1 16.827 24.184 113.768 1.00 76.58 O
ATOM 2 P C B 2 17.951 24.582 114.841 1.00 81.49 P
ATOM 3 OP1 C B 2 19.282 24.363 114.234 1.00 87.74 O
ATOM 4 OP2 C B 2 17.619 23.928 116.132 1.00 75.18 O
ATOM 5 O5' C B 2 17.750 26.148 115.016 1.00 95.42 O
ATOM 6 C5' C B 2 17.650 27.005 113.883 1.00 77.41 C
ATOM 7 C4' C B 2 17.125 28.357 114.306 1.00 81.70 C
ATOM 8 O4' C B 2 15.722 28.266 114.668 1.00 83.14 O
ATOM 9 C3' C B 2 17.791 28.919 115.547 1.00 76.65 C
ATOM 10 O3' C B 2 19.022 29.534 115.186 1.00 80.16 O
ATOM 11 C2' C B 2 16.748 29.904 116.059 1.00 68.27 C
ATOM 12 O2' C B 2 16.784 31.122 115.354 1.00 92.38 O
ATOM 13 C1' C B 2 15.442 29.180 115.715 1.00 82.94 C
ATOM 14 N1 C B 2 14.842 28.436 116.836 1.00 90.57 N
ATOM 15 C2 C B 2 13.942 29.093 117.672 1.00 91.52 C
ATOM 16 O2 C B 2 13.685 30.280 117.452 1.00 97.29 O
ATOM 17 N3 C B 2 13.374 28.420 118.699 1.00 88.57 N
ATOM 18 C4 C B 2 13.684 27.141 118.906 1.00 87.02 C
ATOM 19 N4 C B 2 13.107 26.514 119.933 1.00 83.87 N
ATOM 20 C5 C B 2 14.602 26.445 118.072 1.00 89.08 C
ATOM 21 C6 C B 2 15.154 27.124 117.058 1.00 93.06 C
ATOM 22 P C B 3 20.184 29.694 116.282 1.00 74.12 P
ATOM 23 OP1 C B 3 21.481 30.007 115.626 1.00 59.92 O
ATOM 24 OP2 C B 3 20.097 28.540 117.209 1.00 77.05 O
ATOM 25 O5' C B 3 19.720 30.990 117.065 1.00 79.76 O
TER
ATOM 2 P A A 6 8.991 28.300 129.994 1.00135.69 P
ATOM 3 OP1 A A 6 7.951 28.822 130.915 1.00132.94 O
ATOM 4 OP2 A A 6 8.754 27.018 129.279 1.00112.45 O
ATOM 5 O5' A A 6 9.323 29.426 128.912 1.00124.97 O
ATOM 6 C5' A A 6 9.775 30.715 129.320 1.00113.40 C
ATOM 7 C4' A A 6 10.408 31.447 128.158 1.00123.95 C
ATOM 8 O4' A A 6 11.616 30.751 127.739 1.00125.94 O
ATOM 9 C3' A A 6 9.576 31.528 126.889 1.00127.22 C
ATOM 10 O3' A A 6 8.626 32.584 126.944 1.00125.58 O
ATOM 11 C2' A A 6 10.648 31.762 125.834 1.00121.22 C
ATOM 12 O2' A A 6 11.127 33.092 125.828 1.00125.30 O
ATOM 13 C1' A A 6 11.744 30.817 126.325 1.00118.51 C
ATOM 14 N9 A A 6 11.565 29.467 125.791 1.00114.18 N
ATOM 15 C8 A A 6 10.918 28.407 126.383 1.00113.51 C
ATOM 16 N7 A A 6 10.891 27.324 125.645 1.00109.70 N
ATOM 17 C5 A A 6 11.570 27.690 124.494 1.00106.78 C
ATOM 18 C6 A A 6 11.883 26.988 123.325 1.00104.93 C
ATOM 19 N6 A A 6 11.539 25.717 123.113 1.00 98.53 N
ATOM 20 N1 A A 6 12.573 27.642 122.366 1.00107.53 N
ATOM 21 C2 A A 6 12.920 28.918 122.582 1.00108.62 C
ATOM 22 N3 A A 6 12.685 29.687 123.641 1.00109.53 N
ATOM 23 C4 A A 6 11.997 29.005 124.572 1.00110.22 C
ATOM 24 P G A 7 7.154 32.357 126.339 1.00118.46 P
ATOM 25 OP1 G A 7 6.389 33.611 126.538 1.00132.48 O
ATOM 26 OP2 G A 7 6.620 31.079 126.878 1.00 84.63 O
ATOM 27 O5' G A 7 7.405 32.169 124.778 1.00120.83 O
TER
ATOM 1 O3' U B 1 16.827 24.184 113.768 1.00 76.58 O
ATOM 2 P C B 2 17.951 24.582 114.841 1.00 81.49 P
ATOM 3 OP1 C B 2 19.282 24.363 114.234 1.00 87.74 O
ATOM 4 OP2 C B 2 17.619 23.928 116.132 1.00 75.18 O
ATOM 5 O5' C B 2 17.750 26.148 115.016 1.00 95.42 O
ATOM 6 C5' C B 2 17.650 27.005 113.883 1.00 77.41 C
ATOM 7 C4' C B 2 17.125 28.357 114.306 1.00 81.70 C
ATOM 8 O4' C B 2 15.722 28.266 114.668 1.00 83.14 O
ATOM 9 C3' C B 2 17.791 28.919 115.547 1.00 76.65 C
ATOM 10 O3' C B 2 19.022 29.534 115.186 1.00 80.16 O
ATOM 11 C2' C B 2 16.748 29.904 116.059 1.00 68.27 C
ATOM 12 O2' C B 2 16.784 31.122 115.354 1.00 92.38 O
ATOM 13 C1' C B 2 15.442 29.180 115.715 1.00 82.94 C
ATOM 14 N1 C B 2 14.842 28.436 116.836 1.00 90.57 N
ATOM 15 C2 C B 2 13.942 29.093 117.672 1.00 91.52 C
ATOM 16 O2 C B 2 13.685 30.280 117.452 1.00 97.29 O
ATOM 17 N3 C B 2 13.374 28.420 118.699 1.00 88.57 N
ATOM 18 C4 C B 2 13.684 27.141 118.906 1.00 87.02 C
ATOM 19 N4 C B 2 13.107 26.514 119.933 1.00 83.87 N
ATOM 20 C5 C B 2 14.602 26.445 118.072 1.00 89.08 C
ATOM 21 C6 C B 2 15.154 27.124 117.058 1.00 93.06 C
ATOM 22 P C B 3 20.184 29.694 116.282 1.00 74.12 P
ATOM 23 OP1 C B 3 21.481 30.007 115.626 1.00 59.92 O
ATOM 24 OP2 C B 3 20.097 28.540 117.209 1.00 77.05 O
ATOM 25 O5' C B 3 19.720 30.990 117.065 1.00 79.76 O
TER
Atoms:
OP1: (7.951,28.822,130.915)
OP2: (8.754,27.018,129.279)
C3': (9.576,31.528,126.889)
C1': (11.744,30.817,126.325)
C5': (9.775,30.715,129.320)
O4': (11.616,30.751,127.739)
C8: (10.918,28.407,126.383)
O2': (11.127,33.092,125.828)
C6: (11.883,26.988,123.325)
C5: (11.570,27.690,124.494)
C4: (11.997,29.005,124.572)
P: (8.991,28.300,129.994)
C4': (10.408,31.447,128.158)
C2': (10.648,31.762,125.834)
C2: (12.920,28.918,122.582)
N1: (12.573,27.642,122.366)
N3: (12.685,29.687,123.641)
N6: (11.539,25.717,123.113)
N7: (10.891,27.324,125.645)
N9: (11.565,29.467,125.791)
O5': (9.323,29.426,128.912)
O3': (8.626,32.584,126.944)
OP2: (8.754,27.018,129.279)
C3': (9.576,31.528,126.889)
C1': (11.744,30.817,126.325)
C5': (9.775,30.715,129.320)
O4': (11.616,30.751,127.739)
C8: (10.918,28.407,126.383)
O2': (11.127,33.092,125.828)
C6: (11.883,26.988,123.325)
C5: (11.570,27.690,124.494)
C4: (11.997,29.005,124.572)
P: (8.991,28.300,129.994)
C4': (10.408,31.447,128.158)
C2': (10.648,31.762,125.834)
C2: (12.920,28.918,122.582)
N1: (12.573,27.642,122.366)
N3: (12.685,29.687,123.641)
N6: (11.539,25.717,123.113)
N7: (10.891,27.324,125.645)
N9: (11.565,29.467,125.791)
O5': (9.323,29.426,128.912)
O3': (8.626,32.584,126.944)
C2: (13.942,29.093,117.672)
OP1: (19.282,24.363,114.234)
OP2: (17.619,23.928,116.132)
C4: (13.684,27.141,118.906)
O5': (17.750,26.148,115.016)
C3': (17.791,28.919,115.547)
C1': (15.442,29.180,115.715)
O4': (15.722,28.266,114.668)
C5': (17.650,27.005,113.883)
P: (17.951,24.582,114.841)
O2: (13.685,30.280,117.452)
C4': (17.125,28.357,114.306)
C2': (16.748,29.904,116.059)
O2': (16.784,31.122,115.354)
N1: (14.842,28.436,116.836)
N3: (13.374,28.420,118.699)
N4: (13.107,26.514,119.933)
C6: (15.154,27.124,117.058)
C5: (14.602,26.445,118.072)
O3': (19.022,29.534,115.186)
OP1: (19.282,24.363,114.234)
OP2: (17.619,23.928,116.132)
C4: (13.684,27.141,118.906)
O5': (17.750,26.148,115.016)
C3': (17.791,28.919,115.547)
C1': (15.442,29.180,115.715)
O4': (15.722,28.266,114.668)
C5': (17.650,27.005,113.883)
P: (17.951,24.582,114.841)
O2: (13.685,30.280,117.452)
C4': (17.125,28.357,114.306)
C2': (16.748,29.904,116.059)
O2': (16.784,31.122,115.354)
N1: (14.842,28.436,116.836)
N3: (13.374,28.420,118.699)
N4: (13.107,26.514,119.933)
C6: (15.154,27.124,117.058)
C5: (14.602,26.445,118.072)
O3': (19.022,29.534,115.186)
Image (generated by PyMOL):