Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5F:61425:61267
Extra
PDB:
ATOM 1 O3' U A1424 242.345 -27.681 275.397 1.00 70.36 O
ATOM 2 P C A1425 241.093 -26.844 275.939 1.00 73.83 P
ATOM 3 OP1 C A1425 240.343 -27.736 276.852 1.00 74.08 O
ATOM 4 OP2 C A1425 240.390 -26.286 274.756 1.00 73.62 O
ATOM 5 O5' C A1425 241.779 -25.671 276.769 1.00 74.10 O
ATOM 6 C5' C A1425 243.031 -25.870 277.412 1.00 74.18 C
ATOM 7 C4' C A1425 243.118 -25.140 278.728 1.00 74.62 C
ATOM 8 O4' C A1425 243.654 -23.815 278.493 1.00 74.65 O
ATOM 9 C3' C A1425 241.792 -24.973 279.486 1.00 74.95 C
ATOM 10 O3' C A1425 241.940 -25.370 280.847 1.00 75.33 O
ATOM 11 C2' C A1425 241.501 -23.471 279.423 1.00 75.11 C
ATOM 12 O2' C A1425 240.907 -22.922 280.593 1.00 75.60 O
ATOM 13 C1' C A1425 242.866 -22.836 279.141 1.00 74.99 C
ATOM 14 N1 C A1425 242.739 -21.678 278.248 1.00 74.85 N
ATOM 15 C2 C A1425 242.939 -20.373 278.675 1.00 75.12 C
ATOM 16 O2 C A1425 243.340 -20.142 279.824 1.00 75.49 O
ATOM 17 N3 C A1425 242.705 -19.388 277.796 1.00 74.97 N
ATOM 18 C4 C A1425 242.265 -19.673 276.573 1.00 74.58 C
ATOM 19 N4 C A1425 242.036 -18.683 275.711 1.00 74.45 N
ATOM 20 C5 C A1425 242.030 -20.995 276.143 1.00 74.33 C
ATOM 21 C6 C A1425 242.256 -21.957 277.016 1.00 74.48 C
ATOM 22 P U A1426 240.782 -26.223 281.578 1.00 84.96 P
ATOM 23 OP1 U A1426 239.472 -25.682 281.130 1.00 85.01 O
ATOM 24 OP2 U A1426 241.102 -26.220 283.033 1.00 85.40 O
ATOM 25 O5' U A1426 240.980 -27.685 280.973 1.00 84.60 O
TER
ATOM 1 O3' U B1266 236.602 -17.957 273.464 1.00 86.62 O
ATOM 2 P G B1267 236.758 -19.065 272.310 1.00 74.92 P
ATOM 3 OP1 G B1267 236.055 -18.554 271.106 1.00 74.74 O
ATOM 4 OP2 G B1267 236.330 -20.361 272.895 1.00 75.03 O
ATOM 5 O5' G B1267 238.322 -19.070 272.029 1.00 74.64 O
ATOM 6 C5' G B1267 239.212 -19.919 272.736 1.00 74.65 C
ATOM 7 C4' G B1267 240.573 -19.908 272.096 1.00 74.35 C
ATOM 8 O4' G B1267 241.543 -20.540 272.983 1.00 74.46 O
ATOM 9 C3' G B1267 240.672 -20.651 270.754 1.00 73.93 C
ATOM 10 O3' G B1267 241.508 -19.905 269.838 1.00 73.70 O
ATOM 11 C2' G B1267 241.371 -21.949 271.154 1.00 73.88 C
ATOM 12 O2' G B1267 242.063 -22.582 270.105 1.00 73.54 O
ATOM 13 C1' G B1267 242.319 -21.420 272.215 1.00 74.13 C
ATOM 14 N9 G B1267 242.916 -22.422 273.078 1.00 74.24 N
ATOM 15 C8 G B1267 242.415 -23.569 273.592 1.00 74.31 C
ATOM 16 N7 G B1267 243.299 -24.198 274.304 1.00 74.40 N
ATOM 17 C5 G B1267 244.434 -23.429 274.223 1.00 74.40 C
ATOM 18 C6 G B1267 245.726 -23.596 274.784 1.00 74.51 C
ATOM 19 O6 G B1267 246.113 -24.530 275.473 1.00 74.61 O
ATOM 20 N1 G B1267 246.636 -22.585 274.470 1.00 74.51 N
ATOM 21 C2 G B1267 246.310 -21.534 273.678 1.00 74.39 C
ATOM 22 N2 G B1267 247.301 -20.661 273.480 1.00 74.41 N
ATOM 23 N3 G B1267 245.103 -21.355 273.146 1.00 74.27 N
ATOM 24 C4 G B1267 244.220 -22.334 273.461 1.00 74.30 C
ATOM 25 P C B1268 240.903 -19.395 268.439 1.00 91.98 P
ATOM 26 OP1 C B1268 239.887 -20.353 268.043 1.00 91.90 O
ATOM 27 OP2 C B1268 242.000 -19.147 267.551 1.00 91.72 O
ATOM 28 O5' C B1268 240.237 -18.011 268.831 1.00 92.24 O
TER
ATOM 2 P C A1425 241.093 -26.844 275.939 1.00 73.83 P
ATOM 3 OP1 C A1425 240.343 -27.736 276.852 1.00 74.08 O
ATOM 4 OP2 C A1425 240.390 -26.286 274.756 1.00 73.62 O
ATOM 5 O5' C A1425 241.779 -25.671 276.769 1.00 74.10 O
ATOM 6 C5' C A1425 243.031 -25.870 277.412 1.00 74.18 C
ATOM 7 C4' C A1425 243.118 -25.140 278.728 1.00 74.62 C
ATOM 8 O4' C A1425 243.654 -23.815 278.493 1.00 74.65 O
ATOM 9 C3' C A1425 241.792 -24.973 279.486 1.00 74.95 C
ATOM 10 O3' C A1425 241.940 -25.370 280.847 1.00 75.33 O
ATOM 11 C2' C A1425 241.501 -23.471 279.423 1.00 75.11 C
ATOM 12 O2' C A1425 240.907 -22.922 280.593 1.00 75.60 O
ATOM 13 C1' C A1425 242.866 -22.836 279.141 1.00 74.99 C
ATOM 14 N1 C A1425 242.739 -21.678 278.248 1.00 74.85 N
ATOM 15 C2 C A1425 242.939 -20.373 278.675 1.00 75.12 C
ATOM 16 O2 C A1425 243.340 -20.142 279.824 1.00 75.49 O
ATOM 17 N3 C A1425 242.705 -19.388 277.796 1.00 74.97 N
ATOM 18 C4 C A1425 242.265 -19.673 276.573 1.00 74.58 C
ATOM 19 N4 C A1425 242.036 -18.683 275.711 1.00 74.45 N
ATOM 20 C5 C A1425 242.030 -20.995 276.143 1.00 74.33 C
ATOM 21 C6 C A1425 242.256 -21.957 277.016 1.00 74.48 C
ATOM 22 P U A1426 240.782 -26.223 281.578 1.00 84.96 P
ATOM 23 OP1 U A1426 239.472 -25.682 281.130 1.00 85.01 O
ATOM 24 OP2 U A1426 241.102 -26.220 283.033 1.00 85.40 O
ATOM 25 O5' U A1426 240.980 -27.685 280.973 1.00 84.60 O
TER
ATOM 1 O3' U B1266 236.602 -17.957 273.464 1.00 86.62 O
ATOM 2 P G B1267 236.758 -19.065 272.310 1.00 74.92 P
ATOM 3 OP1 G B1267 236.055 -18.554 271.106 1.00 74.74 O
ATOM 4 OP2 G B1267 236.330 -20.361 272.895 1.00 75.03 O
ATOM 5 O5' G B1267 238.322 -19.070 272.029 1.00 74.64 O
ATOM 6 C5' G B1267 239.212 -19.919 272.736 1.00 74.65 C
ATOM 7 C4' G B1267 240.573 -19.908 272.096 1.00 74.35 C
ATOM 8 O4' G B1267 241.543 -20.540 272.983 1.00 74.46 O
ATOM 9 C3' G B1267 240.672 -20.651 270.754 1.00 73.93 C
ATOM 10 O3' G B1267 241.508 -19.905 269.838 1.00 73.70 O
ATOM 11 C2' G B1267 241.371 -21.949 271.154 1.00 73.88 C
ATOM 12 O2' G B1267 242.063 -22.582 270.105 1.00 73.54 O
ATOM 13 C1' G B1267 242.319 -21.420 272.215 1.00 74.13 C
ATOM 14 N9 G B1267 242.916 -22.422 273.078 1.00 74.24 N
ATOM 15 C8 G B1267 242.415 -23.569 273.592 1.00 74.31 C
ATOM 16 N7 G B1267 243.299 -24.198 274.304 1.00 74.40 N
ATOM 17 C5 G B1267 244.434 -23.429 274.223 1.00 74.40 C
ATOM 18 C6 G B1267 245.726 -23.596 274.784 1.00 74.51 C
ATOM 19 O6 G B1267 246.113 -24.530 275.473 1.00 74.61 O
ATOM 20 N1 G B1267 246.636 -22.585 274.470 1.00 74.51 N
ATOM 21 C2 G B1267 246.310 -21.534 273.678 1.00 74.39 C
ATOM 22 N2 G B1267 247.301 -20.661 273.480 1.00 74.41 N
ATOM 23 N3 G B1267 245.103 -21.355 273.146 1.00 74.27 N
ATOM 24 C4 G B1267 244.220 -22.334 273.461 1.00 74.30 C
ATOM 25 P C B1268 240.903 -19.395 268.439 1.00 91.98 P
ATOM 26 OP1 C B1268 239.887 -20.353 268.043 1.00 91.90 O
ATOM 27 OP2 C B1268 242.000 -19.147 267.551 1.00 91.72 O
ATOM 28 O5' C B1268 240.237 -18.011 268.831 1.00 92.24 O
TER
Atoms:
C2: (242.939,-20.373,278.675)
OP1: (240.343,-27.736,276.852)
OP2: (240.390,-26.286,274.756)
C4: (242.265,-19.673,276.573)
O5': (241.779,-25.671,276.769)
C3': (241.792,-24.973,279.486)
C1': (242.866,-22.836,279.141)
O4': (243.654,-23.815,278.493)
C5': (243.031,-25.870,277.412)
P: (241.093,-26.844,275.939)
O2: (243.340,-20.142,279.824)
C4': (243.118,-25.140,278.728)
C2': (241.501,-23.471,279.423)
O2': (240.907,-22.922,280.593)
N1: (242.739,-21.678,278.248)
N3: (242.705,-19.388,277.796)
N4: (242.036,-18.683,275.711)
C6: (242.256,-21.957,277.016)
C5: (242.030,-20.995,276.143)
O3': (241.940,-25.370,280.847)
OP1: (240.343,-27.736,276.852)
OP2: (240.390,-26.286,274.756)
C4: (242.265,-19.673,276.573)
O5': (241.779,-25.671,276.769)
C3': (241.792,-24.973,279.486)
C1': (242.866,-22.836,279.141)
O4': (243.654,-23.815,278.493)
C5': (243.031,-25.870,277.412)
P: (241.093,-26.844,275.939)
O2: (243.340,-20.142,279.824)
C4': (243.118,-25.140,278.728)
C2': (241.501,-23.471,279.423)
O2': (240.907,-22.922,280.593)
N1: (242.739,-21.678,278.248)
N3: (242.705,-19.388,277.796)
N4: (242.036,-18.683,275.711)
C6: (242.256,-21.957,277.016)
C5: (242.030,-20.995,276.143)
O3': (241.940,-25.370,280.847)
OP1: (236.055,-18.554,271.106)
OP2: (236.330,-20.361,272.895)
C3': (240.672,-20.651,270.754)
C1': (242.319,-21.420,272.215)
C5': (239.212,-19.919,272.736)
O6: (246.113,-24.530,275.473)
O4': (241.543,-20.540,272.983)
C8: (242.415,-23.569,273.592)
C2: (246.310,-21.534,273.678)
C6: (245.726,-23.596,274.784)
C5: (244.434,-23.429,274.223)
C4: (244.220,-22.334,273.461)
P: (236.758,-19.065,272.310)
C4': (240.573,-19.908,272.096)
C2': (241.371,-21.949,271.154)
O2': (242.063,-22.582,270.105)
N1: (246.636,-22.585,274.470)
N2: (247.301,-20.661,273.480)
N3: (245.103,-21.355,273.146)
N7: (243.299,-24.198,274.304)
N9: (242.916,-22.422,273.078)
O5': (238.322,-19.070,272.029)
O3': (241.508,-19.905,269.838)
OP2: (236.330,-20.361,272.895)
C3': (240.672,-20.651,270.754)
C1': (242.319,-21.420,272.215)
C5': (239.212,-19.919,272.736)
O6: (246.113,-24.530,275.473)
O4': (241.543,-20.540,272.983)
C8: (242.415,-23.569,273.592)
C2: (246.310,-21.534,273.678)
C6: (245.726,-23.596,274.784)
C5: (244.434,-23.429,274.223)
C4: (244.220,-22.334,273.461)
P: (236.758,-19.065,272.310)
C4': (240.573,-19.908,272.096)
C2': (241.371,-21.949,271.154)
O2': (242.063,-22.582,270.105)
N1: (246.636,-22.585,274.470)
N2: (247.301,-20.661,273.480)
N3: (245.103,-21.355,273.146)
N7: (243.299,-24.198,274.304)
N9: (242.916,-22.422,273.078)
O5': (238.322,-19.070,272.029)
O3': (241.508,-19.905,269.838)
Image (generated by PyMOL):