Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2D2K:C5:D13
Extra
PDB:
ATOM 1 O3' G A 4 14.307 20.750 42.424 1.00 67.48 O
ATOM 2 P A A 5 15.420 19.598 42.565 1.00 72.60 P
ATOM 3 OP1 A A 5 14.734 18.295 42.372 1.00 74.53 O
ATOM 4 OP2 A A 5 16.185 19.851 43.818 1.00 74.03 O
ATOM 5 O5' A A 5 16.379 19.840 41.321 1.00 63.95 O
ATOM 6 C5' A A 5 15.851 19.729 40.018 1.00 56.98 C
ATOM 7 C4' A A 5 16.641 20.557 39.045 1.00 52.34 C
ATOM 8 O4' A A 5 16.788 21.902 39.573 1.00 48.71 O
ATOM 9 C3' A A 5 18.076 20.116 38.866 1.00 50.82 C
ATOM 10 O3' A A 5 18.196 19.025 37.990 1.00 53.51 O
ATOM 11 C2' A A 5 18.742 21.371 38.334 1.00 50.55 C
ATOM 12 O2' A A 5 18.500 21.577 36.958 1.00 49.81 O
ATOM 13 C1' A A 5 18.040 22.440 39.164 1.00 52.10 C
ATOM 14 N9 A A 5 18.838 22.781 40.340 1.00 52.88 N
ATOM 15 C8 A A 5 18.597 22.571 41.679 1.00 52.62 C
ATOM 16 N7 A A 5 19.564 22.992 42.460 1.00 50.03 N
ATOM 17 C5 A A 5 20.496 23.520 41.576 1.00 49.17 C
ATOM 18 C6 A A 5 21.741 24.128 41.772 1.00 51.31 C
ATOM 19 N6 A A 5 22.279 24.323 42.976 1.00 51.63 N
ATOM 20 N1 A A 5 22.424 24.540 40.675 1.00 53.74 N
ATOM 21 C2 A A 5 21.872 24.351 39.468 1.00 52.46 C
ATOM 22 N3 A A 5 20.705 23.796 39.158 1.00 49.00 N
ATOM 23 C4 A A 5 20.061 23.399 40.271 1.00 50.42 C
ATOM 24 P G A 6 19.216 17.853 38.361 1.00 56.51 P
ATOM 25 OP1 G A 6 19.172 16.843 37.273 1.00 54.19 O
ATOM 26 OP2 G A 6 18.926 17.451 39.768 1.00 55.86 O
ATOM 27 O5' G A 6 20.623 18.586 38.313 1.00 51.95 O
TER
ATOM 1 O3' A B 12 30.209 30.413 39.565 1.00 53.44 O
ATOM 2 P C B 13 28.997 31.370 39.161 1.00 58.64 P
ATOM 3 OP1 C B 13 29.625 32.596 38.611 1.00 59.54 O
ATOM 4 OP2 C B 13 28.047 31.474 40.292 1.00 55.25 O
ATOM 5 O5' C B 13 28.261 30.578 37.998 1.00 57.32 O
ATOM 6 C5' C B 13 28.828 30.489 36.698 1.00 55.92 C
ATOM 7 C4' C B 13 27.962 29.616 35.842 1.00 53.18 C
ATOM 8 O4' C B 13 28.039 28.259 36.333 1.00 52.19 O
ATOM 9 C3' C B 13 26.490 29.948 35.934 1.00 56.91 C
ATOM 10 O3' C B 13 26.158 31.015 35.072 1.00 58.45 O
ATOM 11 C2' C B 13 25.834 28.633 35.548 1.00 54.37 C
ATOM 12 O2' C B 13 25.808 28.420 34.153 1.00 56.30 O
ATOM 13 C1' C B 13 26.772 27.636 36.223 1.00 49.54 C
ATOM 14 N1 C B 13 26.341 27.326 37.581 1.00 48.91 N
ATOM 15 C2 C B 13 25.293 26.440 37.772 1.00 51.18 C
ATOM 16 O2 C B 13 24.736 25.948 36.780 1.00 52.89 O
ATOM 17 N3 C B 13 24.907 26.143 39.034 1.00 52.11 N
ATOM 18 C4 C B 13 25.525 26.713 40.073 1.00 50.31 C
ATOM 19 N4 C B 13 25.107 26.399 41.301 1.00 51.68 N
ATOM 20 C5 C B 13 26.595 27.629 39.899 1.00 48.64 C
ATOM 21 C6 C B 13 26.968 27.903 38.649 1.00 50.01 C
ATOM 22 P C B 14 25.057 32.077 35.538 1.00 60.30 P
ATOM 23 OP1 C B 14 25.235 33.278 34.691 1.00 57.00 O
ATOM 24 OP2 C B 14 25.114 32.199 37.020 1.00 64.58 O
ATOM 25 O5' C B 14 23.687 31.360 35.180 1.00 50.05 O
TER
ATOM 2 P A A 5 15.420 19.598 42.565 1.00 72.60 P
ATOM 3 OP1 A A 5 14.734 18.295 42.372 1.00 74.53 O
ATOM 4 OP2 A A 5 16.185 19.851 43.818 1.00 74.03 O
ATOM 5 O5' A A 5 16.379 19.840 41.321 1.00 63.95 O
ATOM 6 C5' A A 5 15.851 19.729 40.018 1.00 56.98 C
ATOM 7 C4' A A 5 16.641 20.557 39.045 1.00 52.34 C
ATOM 8 O4' A A 5 16.788 21.902 39.573 1.00 48.71 O
ATOM 9 C3' A A 5 18.076 20.116 38.866 1.00 50.82 C
ATOM 10 O3' A A 5 18.196 19.025 37.990 1.00 53.51 O
ATOM 11 C2' A A 5 18.742 21.371 38.334 1.00 50.55 C
ATOM 12 O2' A A 5 18.500 21.577 36.958 1.00 49.81 O
ATOM 13 C1' A A 5 18.040 22.440 39.164 1.00 52.10 C
ATOM 14 N9 A A 5 18.838 22.781 40.340 1.00 52.88 N
ATOM 15 C8 A A 5 18.597 22.571 41.679 1.00 52.62 C
ATOM 16 N7 A A 5 19.564 22.992 42.460 1.00 50.03 N
ATOM 17 C5 A A 5 20.496 23.520 41.576 1.00 49.17 C
ATOM 18 C6 A A 5 21.741 24.128 41.772 1.00 51.31 C
ATOM 19 N6 A A 5 22.279 24.323 42.976 1.00 51.63 N
ATOM 20 N1 A A 5 22.424 24.540 40.675 1.00 53.74 N
ATOM 21 C2 A A 5 21.872 24.351 39.468 1.00 52.46 C
ATOM 22 N3 A A 5 20.705 23.796 39.158 1.00 49.00 N
ATOM 23 C4 A A 5 20.061 23.399 40.271 1.00 50.42 C
ATOM 24 P G A 6 19.216 17.853 38.361 1.00 56.51 P
ATOM 25 OP1 G A 6 19.172 16.843 37.273 1.00 54.19 O
ATOM 26 OP2 G A 6 18.926 17.451 39.768 1.00 55.86 O
ATOM 27 O5' G A 6 20.623 18.586 38.313 1.00 51.95 O
TER
ATOM 1 O3' A B 12 30.209 30.413 39.565 1.00 53.44 O
ATOM 2 P C B 13 28.997 31.370 39.161 1.00 58.64 P
ATOM 3 OP1 C B 13 29.625 32.596 38.611 1.00 59.54 O
ATOM 4 OP2 C B 13 28.047 31.474 40.292 1.00 55.25 O
ATOM 5 O5' C B 13 28.261 30.578 37.998 1.00 57.32 O
ATOM 6 C5' C B 13 28.828 30.489 36.698 1.00 55.92 C
ATOM 7 C4' C B 13 27.962 29.616 35.842 1.00 53.18 C
ATOM 8 O4' C B 13 28.039 28.259 36.333 1.00 52.19 O
ATOM 9 C3' C B 13 26.490 29.948 35.934 1.00 56.91 C
ATOM 10 O3' C B 13 26.158 31.015 35.072 1.00 58.45 O
ATOM 11 C2' C B 13 25.834 28.633 35.548 1.00 54.37 C
ATOM 12 O2' C B 13 25.808 28.420 34.153 1.00 56.30 O
ATOM 13 C1' C B 13 26.772 27.636 36.223 1.00 49.54 C
ATOM 14 N1 C B 13 26.341 27.326 37.581 1.00 48.91 N
ATOM 15 C2 C B 13 25.293 26.440 37.772 1.00 51.18 C
ATOM 16 O2 C B 13 24.736 25.948 36.780 1.00 52.89 O
ATOM 17 N3 C B 13 24.907 26.143 39.034 1.00 52.11 N
ATOM 18 C4 C B 13 25.525 26.713 40.073 1.00 50.31 C
ATOM 19 N4 C B 13 25.107 26.399 41.301 1.00 51.68 N
ATOM 20 C5 C B 13 26.595 27.629 39.899 1.00 48.64 C
ATOM 21 C6 C B 13 26.968 27.903 38.649 1.00 50.01 C
ATOM 22 P C B 14 25.057 32.077 35.538 1.00 60.30 P
ATOM 23 OP1 C B 14 25.235 33.278 34.691 1.00 57.00 O
ATOM 24 OP2 C B 14 25.114 32.199 37.020 1.00 64.58 O
ATOM 25 O5' C B 14 23.687 31.360 35.180 1.00 50.05 O
TER
Atoms:
OP1: (14.734,18.295,42.372)
OP2: (16.185,19.851,43.818)
C3': (18.076,20.116,38.866)
C1': (18.040,22.440,39.164)
C5': (15.851,19.729,40.018)
O4': (16.788,21.902,39.573)
C8: (18.597,22.571,41.679)
O2': (18.500,21.577,36.958)
C6: (21.741,24.128,41.772)
C5: (20.496,23.520,41.576)
C4: (20.061,23.399,40.271)
P: (15.420,19.598,42.565)
C4': (16.641,20.557,39.045)
C2': (18.742,21.371,38.334)
C2: (21.872,24.351,39.468)
N1: (22.424,24.540,40.675)
N3: (20.705,23.796,39.158)
N6: (22.279,24.323,42.976)
N7: (19.564,22.992,42.460)
N9: (18.838,22.781,40.340)
O5': (16.379,19.840,41.321)
O3': (18.196,19.025,37.990)
OP2: (16.185,19.851,43.818)
C3': (18.076,20.116,38.866)
C1': (18.040,22.440,39.164)
C5': (15.851,19.729,40.018)
O4': (16.788,21.902,39.573)
C8: (18.597,22.571,41.679)
O2': (18.500,21.577,36.958)
C6: (21.741,24.128,41.772)
C5: (20.496,23.520,41.576)
C4: (20.061,23.399,40.271)
P: (15.420,19.598,42.565)
C4': (16.641,20.557,39.045)
C2': (18.742,21.371,38.334)
C2: (21.872,24.351,39.468)
N1: (22.424,24.540,40.675)
N3: (20.705,23.796,39.158)
N6: (22.279,24.323,42.976)
N7: (19.564,22.992,42.460)
N9: (18.838,22.781,40.340)
O5': (16.379,19.840,41.321)
O3': (18.196,19.025,37.990)
C2: (25.293,26.440,37.772)
OP1: (29.625,32.596,38.611)
OP2: (28.047,31.474,40.292)
C4: (25.525,26.713,40.073)
O5': (28.261,30.578,37.998)
C3': (26.490,29.948,35.934)
C1': (26.772,27.636,36.223)
O4': (28.039,28.259,36.333)
C5': (28.828,30.489,36.698)
P: (28.997,31.370,39.161)
O2: (24.736,25.948,36.780)
C4': (27.962,29.616,35.842)
C2': (25.834,28.633,35.548)
O2': (25.808,28.420,34.153)
N1: (26.341,27.326,37.581)
N3: (24.907,26.143,39.034)
N4: (25.107,26.399,41.301)
C6: (26.968,27.903,38.649)
C5: (26.595,27.629,39.899)
O3': (26.158,31.015,35.072)
OP1: (29.625,32.596,38.611)
OP2: (28.047,31.474,40.292)
C4: (25.525,26.713,40.073)
O5': (28.261,30.578,37.998)
C3': (26.490,29.948,35.934)
C1': (26.772,27.636,36.223)
O4': (28.039,28.259,36.333)
C5': (28.828,30.489,36.698)
P: (28.997,31.370,39.161)
O2: (24.736,25.948,36.780)
C4': (27.962,29.616,35.842)
C2': (25.834,28.633,35.548)
O2': (25.808,28.420,34.153)
N1: (26.341,27.326,37.581)
N3: (24.907,26.143,39.034)
N4: (25.107,26.399,41.301)
C6: (26.968,27.903,38.649)
C5: (26.595,27.629,39.899)
O3': (26.158,31.015,35.072)
Image (generated by PyMOL):