Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M5V:E6:P2
Extra
PDB:
ATOM 1 O3' G A 5 8.240 27.529 129.842 1.00 87.31 O
ATOM 2 P A A 6 6.948 27.841 128.926 1.00 89.13 P
ATOM 3 OP1 A A 6 5.934 28.503 129.784 1.00 91.76 O
ATOM 4 OP2 A A 6 6.590 26.600 128.192 1.00 88.26 O
ATOM 5 O5' A A 6 7.459 28.900 127.849 1.00 80.21 O
ATOM 6 C5' A A 6 7.777 30.238 128.223 1.00 74.47 C
ATOM 7 C4' A A 6 8.373 30.982 127.048 1.00 80.67 C
ATOM 8 O4' A A 6 9.596 30.315 126.630 1.00 77.28 O
ATOM 9 C3' A A 6 7.519 31.017 125.789 1.00 79.82 C
ATOM 10 O3' A A 6 6.576 32.084 125.831 1.00 79.80 O
ATOM 11 C2' A A 6 8.568 31.237 124.708 1.00 75.99 C
ATOM 12 O2' A A 6 9.003 32.580 124.639 1.00 75.87 O
ATOM 13 C1' A A 6 9.704 30.349 125.215 1.00 77.12 C
ATOM 14 N9 A A 6 9.597 28.977 124.717 1.00 77.11 N
ATOM 15 C8 A A 6 9.073 27.885 125.366 1.00 77.44 C
ATOM 16 N7 A A 6 9.092 26.785 124.654 1.00 75.60 N
ATOM 17 C5 A A 6 9.672 27.175 123.456 1.00 75.41 C
ATOM 18 C6 A A 6 9.978 26.469 122.280 1.00 75.43 C
ATOM 19 N6 A A 6 9.729 25.167 122.112 1.00 74.58 N
ATOM 20 N1 A A 6 10.556 27.153 121.270 1.00 75.71 N
ATOM 21 C2 A A 6 10.807 28.457 121.440 1.00 75.64 C
ATOM 22 N3 A A 6 10.568 29.231 122.497 1.00 76.29 N
ATOM 23 C4 A A 6 9.993 28.521 123.482 1.00 75.50 C
ATOM 24 P G A 7 5.106 31.871 125.219 1.00 83.59 P
ATOM 25 OP1 G A 7 4.310 33.102 125.461 1.00 85.69 O
ATOM 26 OP2 G A 7 4.604 30.564 125.716 1.00 72.04 O
ATOM 27 O5' G A 7 5.352 31.745 123.650 1.00 80.79 O
TER
ATOM 1 O3' U B 1 15.335 23.830 112.712 1.00 59.85 O
ATOM 2 P C B 2 16.362 24.280 113.865 1.00 50.31 P
ATOM 3 OP1 C B 2 17.752 24.109 113.367 1.00 56.99 O
ATOM 4 OP2 C B 2 15.951 23.612 115.123 1.00 55.43 O
ATOM 5 O5' C B 2 16.076 25.836 114.020 1.00 58.03 O
ATOM 6 C5' C B 2 16.016 26.685 112.878 1.00 56.26 C
ATOM 7 C4' C B 2 15.389 28.004 113.249 1.00 46.42 C
ATOM 8 O4' C B 2 13.996 27.810 113.606 1.00 53.40 O
ATOM 9 C3' C B 2 15.992 28.639 114.484 1.00 55.34 C
ATOM 10 O3' C B 2 17.173 29.335 114.128 1.00 60.66 O
ATOM 11 C2' C B 2 14.877 29.560 114.952 1.00 58.97 C
ATOM 12 O2' C B 2 14.851 30.764 114.219 1.00 68.24 O
ATOM 13 C1' C B 2 13.633 28.728 114.622 1.00 58.82 C
ATOM 14 N1 C B 2 13.104 27.959 115.759 1.00 64.73 N
ATOM 15 C2 C B 2 12.267 28.597 116.681 1.00 66.41 C
ATOM 16 O2 C B 2 12.004 29.798 116.525 1.00 70.30 O
ATOM 17 N3 C B 2 11.766 27.887 117.719 1.00 66.18 N
ATOM 18 C4 C B 2 12.074 26.595 117.852 1.00 66.69 C
ATOM 19 N4 C B 2 11.556 25.931 118.886 1.00 65.75 N
ATOM 20 C5 C B 2 12.928 25.925 116.931 1.00 66.45 C
ATOM 21 C6 C B 2 13.416 26.638 115.910 1.00 65.26 C
ATOM 22 P C B 3 18.387 29.415 115.171 1.00 63.22 P
ATOM 23 OP1 C B 3 19.674 29.502 114.434 1.00 54.75 O
ATOM 24 OP2 C B 3 18.189 28.342 116.176 1.00 65.91 O
ATOM 25 O5' C B 3 18.135 30.804 115.894 1.00 65.73 O
TER
ATOM 2 P A A 6 6.948 27.841 128.926 1.00 89.13 P
ATOM 3 OP1 A A 6 5.934 28.503 129.784 1.00 91.76 O
ATOM 4 OP2 A A 6 6.590 26.600 128.192 1.00 88.26 O
ATOM 5 O5' A A 6 7.459 28.900 127.849 1.00 80.21 O
ATOM 6 C5' A A 6 7.777 30.238 128.223 1.00 74.47 C
ATOM 7 C4' A A 6 8.373 30.982 127.048 1.00 80.67 C
ATOM 8 O4' A A 6 9.596 30.315 126.630 1.00 77.28 O
ATOM 9 C3' A A 6 7.519 31.017 125.789 1.00 79.82 C
ATOM 10 O3' A A 6 6.576 32.084 125.831 1.00 79.80 O
ATOM 11 C2' A A 6 8.568 31.237 124.708 1.00 75.99 C
ATOM 12 O2' A A 6 9.003 32.580 124.639 1.00 75.87 O
ATOM 13 C1' A A 6 9.704 30.349 125.215 1.00 77.12 C
ATOM 14 N9 A A 6 9.597 28.977 124.717 1.00 77.11 N
ATOM 15 C8 A A 6 9.073 27.885 125.366 1.00 77.44 C
ATOM 16 N7 A A 6 9.092 26.785 124.654 1.00 75.60 N
ATOM 17 C5 A A 6 9.672 27.175 123.456 1.00 75.41 C
ATOM 18 C6 A A 6 9.978 26.469 122.280 1.00 75.43 C
ATOM 19 N6 A A 6 9.729 25.167 122.112 1.00 74.58 N
ATOM 20 N1 A A 6 10.556 27.153 121.270 1.00 75.71 N
ATOM 21 C2 A A 6 10.807 28.457 121.440 1.00 75.64 C
ATOM 22 N3 A A 6 10.568 29.231 122.497 1.00 76.29 N
ATOM 23 C4 A A 6 9.993 28.521 123.482 1.00 75.50 C
ATOM 24 P G A 7 5.106 31.871 125.219 1.00 83.59 P
ATOM 25 OP1 G A 7 4.310 33.102 125.461 1.00 85.69 O
ATOM 26 OP2 G A 7 4.604 30.564 125.716 1.00 72.04 O
ATOM 27 O5' G A 7 5.352 31.745 123.650 1.00 80.79 O
TER
ATOM 1 O3' U B 1 15.335 23.830 112.712 1.00 59.85 O
ATOM 2 P C B 2 16.362 24.280 113.865 1.00 50.31 P
ATOM 3 OP1 C B 2 17.752 24.109 113.367 1.00 56.99 O
ATOM 4 OP2 C B 2 15.951 23.612 115.123 1.00 55.43 O
ATOM 5 O5' C B 2 16.076 25.836 114.020 1.00 58.03 O
ATOM 6 C5' C B 2 16.016 26.685 112.878 1.00 56.26 C
ATOM 7 C4' C B 2 15.389 28.004 113.249 1.00 46.42 C
ATOM 8 O4' C B 2 13.996 27.810 113.606 1.00 53.40 O
ATOM 9 C3' C B 2 15.992 28.639 114.484 1.00 55.34 C
ATOM 10 O3' C B 2 17.173 29.335 114.128 1.00 60.66 O
ATOM 11 C2' C B 2 14.877 29.560 114.952 1.00 58.97 C
ATOM 12 O2' C B 2 14.851 30.764 114.219 1.00 68.24 O
ATOM 13 C1' C B 2 13.633 28.728 114.622 1.00 58.82 C
ATOM 14 N1 C B 2 13.104 27.959 115.759 1.00 64.73 N
ATOM 15 C2 C B 2 12.267 28.597 116.681 1.00 66.41 C
ATOM 16 O2 C B 2 12.004 29.798 116.525 1.00 70.30 O
ATOM 17 N3 C B 2 11.766 27.887 117.719 1.00 66.18 N
ATOM 18 C4 C B 2 12.074 26.595 117.852 1.00 66.69 C
ATOM 19 N4 C B 2 11.556 25.931 118.886 1.00 65.75 N
ATOM 20 C5 C B 2 12.928 25.925 116.931 1.00 66.45 C
ATOM 21 C6 C B 2 13.416 26.638 115.910 1.00 65.26 C
ATOM 22 P C B 3 18.387 29.415 115.171 1.00 63.22 P
ATOM 23 OP1 C B 3 19.674 29.502 114.434 1.00 54.75 O
ATOM 24 OP2 C B 3 18.189 28.342 116.176 1.00 65.91 O
ATOM 25 O5' C B 3 18.135 30.804 115.894 1.00 65.73 O
TER
Atoms:
OP1: (5.934,28.503,129.784)
OP2: (6.590,26.600,128.192)
C3': (7.519,31.017,125.789)
C1': (9.704,30.349,125.215)
C5': (7.777,30.238,128.223)
O4': (9.596,30.315,126.630)
C8: (9.073,27.885,125.366)
O2': (9.003,32.580,124.639)
C6: (9.978,26.469,122.280)
C5: (9.672,27.175,123.456)
C4: (9.993,28.521,123.482)
P: (6.948,27.841,128.926)
C4': (8.373,30.982,127.048)
C2': (8.568,31.237,124.708)
C2: (10.807,28.457,121.440)
N1: (10.556,27.153,121.270)
N3: (10.568,29.231,122.497)
N6: (9.729,25.167,122.112)
N7: (9.092,26.785,124.654)
N9: (9.597,28.977,124.717)
O5': (7.459,28.900,127.849)
O3': (6.576,32.084,125.831)
OP2: (6.590,26.600,128.192)
C3': (7.519,31.017,125.789)
C1': (9.704,30.349,125.215)
C5': (7.777,30.238,128.223)
O4': (9.596,30.315,126.630)
C8: (9.073,27.885,125.366)
O2': (9.003,32.580,124.639)
C6: (9.978,26.469,122.280)
C5: (9.672,27.175,123.456)
C4: (9.993,28.521,123.482)
P: (6.948,27.841,128.926)
C4': (8.373,30.982,127.048)
C2': (8.568,31.237,124.708)
C2: (10.807,28.457,121.440)
N1: (10.556,27.153,121.270)
N3: (10.568,29.231,122.497)
N6: (9.729,25.167,122.112)
N7: (9.092,26.785,124.654)
N9: (9.597,28.977,124.717)
O5': (7.459,28.900,127.849)
O3': (6.576,32.084,125.831)
C2: (12.267,28.597,116.681)
OP1: (17.752,24.109,113.367)
OP2: (15.951,23.612,115.123)
C4: (12.074,26.595,117.852)
O5': (16.076,25.836,114.020)
C3': (15.992,28.639,114.484)
C1': (13.633,28.728,114.622)
O4': (13.996,27.810,113.606)
C5': (16.016,26.685,112.878)
P: (16.362,24.280,113.865)
O2: (12.004,29.798,116.525)
C4': (15.389,28.004,113.249)
C2': (14.877,29.560,114.952)
O2': (14.851,30.764,114.219)
N1: (13.104,27.959,115.759)
N3: (11.766,27.887,117.719)
N4: (11.556,25.931,118.886)
C6: (13.416,26.638,115.910)
C5: (12.928,25.925,116.931)
O3': (17.173,29.335,114.128)
OP1: (17.752,24.109,113.367)
OP2: (15.951,23.612,115.123)
C4: (12.074,26.595,117.852)
O5': (16.076,25.836,114.020)
C3': (15.992,28.639,114.484)
C1': (13.633,28.728,114.622)
O4': (13.996,27.810,113.606)
C5': (16.016,26.685,112.878)
P: (16.362,24.280,113.865)
O2: (12.004,29.798,116.525)
C4': (15.389,28.004,113.249)
C2': (14.877,29.560,114.952)
O2': (14.851,30.764,114.219)
N1: (13.104,27.959,115.759)
N3: (11.766,27.887,117.719)
N4: (11.556,25.931,118.886)
C6: (13.416,26.638,115.910)
C5: (12.928,25.925,116.931)
O3': (17.173,29.335,114.128)
Image (generated by PyMOL):