Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M5K:E19:E62
Extra
PDB:
ATOM 1 O3' G A 18 -9.377 3.361 122.146 1.00 93.81 O
ATOM 2 P A A 19 -8.270 3.779 121.057 1.00 92.96 P
ATOM 3 OP1 A A 19 -7.401 2.605 120.789 1.00 78.44 O
ATOM 4 OP2 A A 19 -7.660 5.055 121.517 1.00 64.91 O
ATOM 5 O5' A A 19 -9.130 4.050 119.743 1.00 87.76 O
ATOM 6 C5' A A 19 -9.783 2.972 119.079 1.00 86.94 C
ATOM 7 C4' A A 19 -10.738 3.493 118.035 1.00 83.97 C
ATOM 8 O4' A A 19 -11.775 4.281 118.681 1.00 78.39 O
ATOM 9 C3' A A 19 -10.148 4.447 117.011 1.00 85.25 C
ATOM 10 O3' A A 19 -9.469 3.763 115.965 1.00 86.06 O
ATOM 11 C2' A A 19 -11.392 5.180 116.523 1.00 81.72 C
ATOM 12 O2' A A 19 -12.169 4.437 115.604 1.00 64.50 O
ATOM 13 C1' A A 19 -12.159 5.351 117.833 1.00 76.13 C
ATOM 14 N9 A A 19 -11.795 6.601 118.492 1.00 76.41 N
ATOM 15 C8 A A 19 -10.943 6.784 119.553 1.00 76.62 C
ATOM 16 N7 A A 19 -10.803 8.038 119.908 1.00 75.31 N
ATOM 17 C5 A A 19 -11.620 8.726 119.022 1.00 72.71 C
ATOM 18 C6 A A 19 -11.909 10.089 118.870 1.00 68.33 C
ATOM 19 N6 A A 19 -11.386 11.047 119.639 1.00 74.79 N
ATOM 20 N1 A A 19 -12.764 10.442 117.888 1.00 70.53 N
ATOM 21 C2 A A 19 -13.287 9.481 117.116 1.00 75.45 C
ATOM 22 N3 A A 19 -13.093 8.167 117.160 1.00 72.09 N
ATOM 23 C4 A A 19 -12.239 7.852 118.147 1.00 74.02 C
ATOM 24 P G A 20 -8.224 4.473 115.238 1.00 84.42 P
ATOM 25 OP1 G A 20 -7.799 3.659 114.071 1.00 76.45 O
ATOM 26 OP2 G A 20 -7.244 4.797 116.301 1.00 77.96 O
ATOM 27 O5' G A 20 -8.844 5.835 114.687 1.00 84.41 O
TER
ATOM 1 O3' A B 61 -17.362 18.717 114.699 1.00 96.23 O
ATOM 2 P C B 62 -18.612 17.845 115.213 1.00 95.27 P
ATOM 3 OP1 C B 62 -19.837 18.583 114.822 1.00 98.89 O
ATOM 4 OP2 C B 62 -18.399 17.483 116.640 1.00 69.87 O
ATOM 5 O5' C B 62 -18.532 16.513 114.342 1.00 87.14 O
ATOM 6 C5' C B 62 -18.983 16.501 112.991 1.00 96.00 C
ATOM 7 C4' C B 62 -18.946 15.098 112.435 1.00 91.21 C
ATOM 8 O4' C B 62 -17.580 14.707 112.146 1.00 94.58 O
ATOM 9 C3' C B 62 -19.451 14.018 113.373 1.00 93.87 C
ATOM 10 O3' C B 62 -20.866 13.935 113.348 1.00 95.74 O
ATOM 11 C2' C B 62 -18.787 12.774 112.803 1.00 95.71 C
ATOM 12 O2' C B 62 -19.437 12.281 111.650 1.00 90.32 O
ATOM 13 C1' C B 62 -17.411 13.324 112.423 1.00 95.14 C
ATOM 14 N1 C B 62 -16.443 13.196 113.521 1.00 95.88 N
ATOM 15 C2 C B 62 -15.771 11.982 113.696 1.00 94.58 C
ATOM 16 O2 C B 62 -16.000 11.049 112.910 1.00 90.50 O
ATOM 17 N3 C B 62 -14.891 11.857 114.715 1.00 97.76 N
ATOM 18 C4 C B 62 -14.672 12.888 115.538 1.00100.22 C
ATOM 19 N4 C B 62 -13.798 12.724 116.535 1.00101.56 N
ATOM 20 C5 C B 62 -15.340 14.136 115.378 1.00 97.68 C
ATOM 21 C6 C B 62 -16.207 14.245 114.366 1.00 95.93 C
ATOM 22 P C B 63 -21.651 13.469 114.665 1.00107.96 P
ATOM 23 OP1 C B 63 -23.108 13.532 114.385 1.00115.36 O
ATOM 24 OP2 C B 63 -21.091 14.233 115.808 1.00104.05 O
ATOM 25 O5' C B 63 -21.230 11.942 114.822 1.00 96.96 O
TER
ATOM 2 P A A 19 -8.270 3.779 121.057 1.00 92.96 P
ATOM 3 OP1 A A 19 -7.401 2.605 120.789 1.00 78.44 O
ATOM 4 OP2 A A 19 -7.660 5.055 121.517 1.00 64.91 O
ATOM 5 O5' A A 19 -9.130 4.050 119.743 1.00 87.76 O
ATOM 6 C5' A A 19 -9.783 2.972 119.079 1.00 86.94 C
ATOM 7 C4' A A 19 -10.738 3.493 118.035 1.00 83.97 C
ATOM 8 O4' A A 19 -11.775 4.281 118.681 1.00 78.39 O
ATOM 9 C3' A A 19 -10.148 4.447 117.011 1.00 85.25 C
ATOM 10 O3' A A 19 -9.469 3.763 115.965 1.00 86.06 O
ATOM 11 C2' A A 19 -11.392 5.180 116.523 1.00 81.72 C
ATOM 12 O2' A A 19 -12.169 4.437 115.604 1.00 64.50 O
ATOM 13 C1' A A 19 -12.159 5.351 117.833 1.00 76.13 C
ATOM 14 N9 A A 19 -11.795 6.601 118.492 1.00 76.41 N
ATOM 15 C8 A A 19 -10.943 6.784 119.553 1.00 76.62 C
ATOM 16 N7 A A 19 -10.803 8.038 119.908 1.00 75.31 N
ATOM 17 C5 A A 19 -11.620 8.726 119.022 1.00 72.71 C
ATOM 18 C6 A A 19 -11.909 10.089 118.870 1.00 68.33 C
ATOM 19 N6 A A 19 -11.386 11.047 119.639 1.00 74.79 N
ATOM 20 N1 A A 19 -12.764 10.442 117.888 1.00 70.53 N
ATOM 21 C2 A A 19 -13.287 9.481 117.116 1.00 75.45 C
ATOM 22 N3 A A 19 -13.093 8.167 117.160 1.00 72.09 N
ATOM 23 C4 A A 19 -12.239 7.852 118.147 1.00 74.02 C
ATOM 24 P G A 20 -8.224 4.473 115.238 1.00 84.42 P
ATOM 25 OP1 G A 20 -7.799 3.659 114.071 1.00 76.45 O
ATOM 26 OP2 G A 20 -7.244 4.797 116.301 1.00 77.96 O
ATOM 27 O5' G A 20 -8.844 5.835 114.687 1.00 84.41 O
TER
ATOM 1 O3' A B 61 -17.362 18.717 114.699 1.00 96.23 O
ATOM 2 P C B 62 -18.612 17.845 115.213 1.00 95.27 P
ATOM 3 OP1 C B 62 -19.837 18.583 114.822 1.00 98.89 O
ATOM 4 OP2 C B 62 -18.399 17.483 116.640 1.00 69.87 O
ATOM 5 O5' C B 62 -18.532 16.513 114.342 1.00 87.14 O
ATOM 6 C5' C B 62 -18.983 16.501 112.991 1.00 96.00 C
ATOM 7 C4' C B 62 -18.946 15.098 112.435 1.00 91.21 C
ATOM 8 O4' C B 62 -17.580 14.707 112.146 1.00 94.58 O
ATOM 9 C3' C B 62 -19.451 14.018 113.373 1.00 93.87 C
ATOM 10 O3' C B 62 -20.866 13.935 113.348 1.00 95.74 O
ATOM 11 C2' C B 62 -18.787 12.774 112.803 1.00 95.71 C
ATOM 12 O2' C B 62 -19.437 12.281 111.650 1.00 90.32 O
ATOM 13 C1' C B 62 -17.411 13.324 112.423 1.00 95.14 C
ATOM 14 N1 C B 62 -16.443 13.196 113.521 1.00 95.88 N
ATOM 15 C2 C B 62 -15.771 11.982 113.696 1.00 94.58 C
ATOM 16 O2 C B 62 -16.000 11.049 112.910 1.00 90.50 O
ATOM 17 N3 C B 62 -14.891 11.857 114.715 1.00 97.76 N
ATOM 18 C4 C B 62 -14.672 12.888 115.538 1.00100.22 C
ATOM 19 N4 C B 62 -13.798 12.724 116.535 1.00101.56 N
ATOM 20 C5 C B 62 -15.340 14.136 115.378 1.00 97.68 C
ATOM 21 C6 C B 62 -16.207 14.245 114.366 1.00 95.93 C
ATOM 22 P C B 63 -21.651 13.469 114.665 1.00107.96 P
ATOM 23 OP1 C B 63 -23.108 13.532 114.385 1.00115.36 O
ATOM 24 OP2 C B 63 -21.091 14.233 115.808 1.00104.05 O
ATOM 25 O5' C B 63 -21.230 11.942 114.822 1.00 96.96 O
TER
Atoms:
OP1: (-7.401,2.605,120.789)
OP2: (-7.660,5.055,121.517)
C3': (-10.148,4.447,117.011)
C1': (-12.159,5.351,117.833)
C5': (-9.783,2.972,119.079)
O4': (-11.775,4.281,118.681)
C8: (-10.943,6.784,119.553)
O2': (-12.169,4.437,115.604)
C6: (-11.909,10.089,118.870)
C5: (-11.620,8.726,119.022)
C4: (-12.239,7.852,118.147)
P: (-8.270,3.779,121.057)
C4': (-10.738,3.493,118.035)
C2': (-11.392,5.180,116.523)
C2: (-13.287,9.481,117.116)
N1: (-12.764,10.442,117.888)
N3: (-13.093,8.167,117.160)
N6: (-11.386,11.047,119.639)
N7: (-10.803,8.038,119.908)
N9: (-11.795,6.601,118.492)
O5': (-9.130,4.050,119.743)
O3': (-9.469,3.763,115.965)
OP2: (-7.660,5.055,121.517)
C3': (-10.148,4.447,117.011)
C1': (-12.159,5.351,117.833)
C5': (-9.783,2.972,119.079)
O4': (-11.775,4.281,118.681)
C8: (-10.943,6.784,119.553)
O2': (-12.169,4.437,115.604)
C6: (-11.909,10.089,118.870)
C5: (-11.620,8.726,119.022)
C4: (-12.239,7.852,118.147)
P: (-8.270,3.779,121.057)
C4': (-10.738,3.493,118.035)
C2': (-11.392,5.180,116.523)
C2: (-13.287,9.481,117.116)
N1: (-12.764,10.442,117.888)
N3: (-13.093,8.167,117.160)
N6: (-11.386,11.047,119.639)
N7: (-10.803,8.038,119.908)
N9: (-11.795,6.601,118.492)
O5': (-9.130,4.050,119.743)
O3': (-9.469,3.763,115.965)
C2: (-15.771,11.982,113.696)
OP1: (-19.837,18.583,114.822)
OP2: (-18.399,17.483,116.640)
C4: (-14.672,12.888,115.538)
O5': (-18.532,16.513,114.342)
C3': (-19.451,14.018,113.373)
C1': (-17.411,13.324,112.423)
O4': (-17.580,14.707,112.146)
C5': (-18.983,16.501,112.991)
P: (-18.612,17.845,115.213)
O2: (-16.000,11.049,112.910)
C4': (-18.946,15.098,112.435)
C2': (-18.787,12.774,112.803)
O2': (-19.437,12.281,111.650)
N1: (-16.443,13.196,113.521)
N3: (-14.891,11.857,114.715)
N4: (-13.798,12.724,116.535)
C6: (-16.207,14.245,114.366)
C5: (-15.340,14.136,115.378)
O3': (-20.866,13.935,113.348)
OP1: (-19.837,18.583,114.822)
OP2: (-18.399,17.483,116.640)
C4: (-14.672,12.888,115.538)
O5': (-18.532,16.513,114.342)
C3': (-19.451,14.018,113.373)
C1': (-17.411,13.324,112.423)
O4': (-17.580,14.707,112.146)
C5': (-18.983,16.501,112.991)
P: (-18.612,17.845,115.213)
O2: (-16.000,11.049,112.910)
C4': (-18.946,15.098,112.435)
C2': (-18.787,12.774,112.803)
O2': (-19.437,12.281,111.650)
N1: (-16.443,13.196,113.521)
N3: (-14.891,11.857,114.715)
N4: (-13.798,12.724,116.535)
C6: (-16.207,14.245,114.366)
C5: (-15.340,14.136,115.378)
O3': (-20.866,13.935,113.348)
Image (generated by PyMOL):