Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:972:9107
Extra
PDB:
ATOM 1 O3' C A 71 39.322 47.575 116.764 1.00 85.40 O
ATOM 2 P A A 72 39.156 48.843 117.743 1.00 85.83 P
ATOM 3 OP1 A A 72 37.860 49.500 117.428 1.00 86.10 O
ATOM 4 OP2 A A 72 40.409 49.641 117.707 1.00 85.28 O
ATOM 5 O5' A A 72 39.044 48.186 119.188 1.00 86.08 O
ATOM 6 C5' A A 72 37.951 47.309 119.524 1.00 85.30 C
ATOM 7 C4' A A 72 37.984 46.986 120.995 1.00 85.36 C
ATOM 8 O4' A A 72 39.174 46.214 121.294 1.00 85.16 O
ATOM 9 C3' A A 72 38.096 48.195 121.905 1.00 86.26 C
ATOM 10 O3' A A 72 36.826 48.797 122.118 1.00 87.40 O
ATOM 11 C2' A A 72 38.706 47.602 123.169 1.00 86.04 C
ATOM 12 O2' A A 72 37.771 46.930 123.987 1.00 87.49 O
ATOM 13 C1' A A 72 39.663 46.568 122.578 1.00 85.15 C
ATOM 14 N9 A A 72 41.039 47.044 122.437 1.00 84.81 N
ATOM 15 C8 A A 72 41.661 47.519 121.308 1.00 85.11 C
ATOM 16 N7 A A 72 42.917 47.842 121.495 1.00 86.03 N
ATOM 17 C5 A A 72 43.136 47.567 122.840 1.00 85.52 C
ATOM 18 C6 A A 72 44.273 47.689 123.661 1.00 85.26 C
ATOM 19 N6 A A 72 45.456 48.133 123.229 1.00 86.23 N
ATOM 20 N1 A A 72 44.151 47.333 124.957 1.00 84.01 N
ATOM 21 C2 A A 72 42.973 46.886 125.389 1.00 83.57 C
ATOM 22 N3 A A 72 41.837 46.723 124.719 1.00 84.70 N
ATOM 23 C4 A A 72 41.987 47.085 123.433 1.00 85.04 C
ATOM 24 P G A 73 36.728 50.382 122.362 1.00 88.63 P
ATOM 25 OP1 G A 73 35.277 50.690 122.479 1.00 88.44 O
ATOM 26 OP2 G A 73 37.547 51.073 121.327 1.00 87.71 O
ATOM 27 O5' G A 73 37.412 50.598 123.790 1.00 86.98 O
TER
ATOM 1 O3' C B 106 52.266 49.204 130.664 1.00 86.67 O
ATOM 2 P C B 107 52.178 47.643 130.272 1.00 87.79 P
ATOM 3 OP1 C B 107 52.834 46.878 131.361 1.00 88.53 O
ATOM 4 OP2 C B 107 52.629 47.445 128.869 1.00 87.20 O
ATOM 5 O5' C B 107 50.617 47.350 130.325 1.00 85.61 O
ATOM 6 C5' C B 107 49.888 47.510 131.548 1.00 84.43 C
ATOM 7 C4' C B 107 48.459 47.096 131.348 1.00 84.38 C
ATOM 8 O4' C B 107 47.745 48.111 130.592 1.00 84.08 O
ATOM 9 C3' C B 107 48.299 45.851 130.502 1.00 84.93 C
ATOM 10 O3' C B 107 48.584 44.651 131.191 1.00 85.62 O
ATOM 11 C2' C B 107 46.869 45.984 130.004 1.00 84.53 C
ATOM 12 O2' C B 107 45.894 45.614 130.956 1.00 83.68 O
ATOM 13 C1' C B 107 46.807 47.486 129.724 1.00 84.28 C
ATOM 14 N1 C B 107 47.192 47.773 128.330 1.00 84.67 N
ATOM 15 C2 C B 107 46.186 47.882 127.359 1.00 85.21 C
ATOM 16 O2 C B 107 44.997 47.767 127.702 1.00 86.62 O
ATOM 17 N3 C B 107 46.532 48.110 126.073 1.00 84.68 N
ATOM 18 C4 C B 107 47.815 48.230 125.739 1.00 84.06 C
ATOM 19 N4 C B 107 48.103 48.444 124.457 1.00 84.86 N
ATOM 20 C5 C B 107 48.859 48.136 126.705 1.00 84.38 C
ATOM 21 C6 C B 107 48.507 47.912 127.976 1.00 84.12 C
ATOM 22 P G B 108 49.089 43.377 130.355 1.00 87.74 P
ATOM 23 OP1 G B 108 49.452 42.317 131.325 1.00 88.55 O
ATOM 24 OP2 G B 108 50.098 43.843 129.367 1.00 87.95 O
ATOM 25 O5' G B 108 47.776 42.911 129.579 1.00 86.92 O
TER
ATOM 2 P A A 72 39.156 48.843 117.743 1.00 85.83 P
ATOM 3 OP1 A A 72 37.860 49.500 117.428 1.00 86.10 O
ATOM 4 OP2 A A 72 40.409 49.641 117.707 1.00 85.28 O
ATOM 5 O5' A A 72 39.044 48.186 119.188 1.00 86.08 O
ATOM 6 C5' A A 72 37.951 47.309 119.524 1.00 85.30 C
ATOM 7 C4' A A 72 37.984 46.986 120.995 1.00 85.36 C
ATOM 8 O4' A A 72 39.174 46.214 121.294 1.00 85.16 O
ATOM 9 C3' A A 72 38.096 48.195 121.905 1.00 86.26 C
ATOM 10 O3' A A 72 36.826 48.797 122.118 1.00 87.40 O
ATOM 11 C2' A A 72 38.706 47.602 123.169 1.00 86.04 C
ATOM 12 O2' A A 72 37.771 46.930 123.987 1.00 87.49 O
ATOM 13 C1' A A 72 39.663 46.568 122.578 1.00 85.15 C
ATOM 14 N9 A A 72 41.039 47.044 122.437 1.00 84.81 N
ATOM 15 C8 A A 72 41.661 47.519 121.308 1.00 85.11 C
ATOM 16 N7 A A 72 42.917 47.842 121.495 1.00 86.03 N
ATOM 17 C5 A A 72 43.136 47.567 122.840 1.00 85.52 C
ATOM 18 C6 A A 72 44.273 47.689 123.661 1.00 85.26 C
ATOM 19 N6 A A 72 45.456 48.133 123.229 1.00 86.23 N
ATOM 20 N1 A A 72 44.151 47.333 124.957 1.00 84.01 N
ATOM 21 C2 A A 72 42.973 46.886 125.389 1.00 83.57 C
ATOM 22 N3 A A 72 41.837 46.723 124.719 1.00 84.70 N
ATOM 23 C4 A A 72 41.987 47.085 123.433 1.00 85.04 C
ATOM 24 P G A 73 36.728 50.382 122.362 1.00 88.63 P
ATOM 25 OP1 G A 73 35.277 50.690 122.479 1.00 88.44 O
ATOM 26 OP2 G A 73 37.547 51.073 121.327 1.00 87.71 O
ATOM 27 O5' G A 73 37.412 50.598 123.790 1.00 86.98 O
TER
ATOM 1 O3' C B 106 52.266 49.204 130.664 1.00 86.67 O
ATOM 2 P C B 107 52.178 47.643 130.272 1.00 87.79 P
ATOM 3 OP1 C B 107 52.834 46.878 131.361 1.00 88.53 O
ATOM 4 OP2 C B 107 52.629 47.445 128.869 1.00 87.20 O
ATOM 5 O5' C B 107 50.617 47.350 130.325 1.00 85.61 O
ATOM 6 C5' C B 107 49.888 47.510 131.548 1.00 84.43 C
ATOM 7 C4' C B 107 48.459 47.096 131.348 1.00 84.38 C
ATOM 8 O4' C B 107 47.745 48.111 130.592 1.00 84.08 O
ATOM 9 C3' C B 107 48.299 45.851 130.502 1.00 84.93 C
ATOM 10 O3' C B 107 48.584 44.651 131.191 1.00 85.62 O
ATOM 11 C2' C B 107 46.869 45.984 130.004 1.00 84.53 C
ATOM 12 O2' C B 107 45.894 45.614 130.956 1.00 83.68 O
ATOM 13 C1' C B 107 46.807 47.486 129.724 1.00 84.28 C
ATOM 14 N1 C B 107 47.192 47.773 128.330 1.00 84.67 N
ATOM 15 C2 C B 107 46.186 47.882 127.359 1.00 85.21 C
ATOM 16 O2 C B 107 44.997 47.767 127.702 1.00 86.62 O
ATOM 17 N3 C B 107 46.532 48.110 126.073 1.00 84.68 N
ATOM 18 C4 C B 107 47.815 48.230 125.739 1.00 84.06 C
ATOM 19 N4 C B 107 48.103 48.444 124.457 1.00 84.86 N
ATOM 20 C5 C B 107 48.859 48.136 126.705 1.00 84.38 C
ATOM 21 C6 C B 107 48.507 47.912 127.976 1.00 84.12 C
ATOM 22 P G B 108 49.089 43.377 130.355 1.00 87.74 P
ATOM 23 OP1 G B 108 49.452 42.317 131.325 1.00 88.55 O
ATOM 24 OP2 G B 108 50.098 43.843 129.367 1.00 87.95 O
ATOM 25 O5' G B 108 47.776 42.911 129.579 1.00 86.92 O
TER
Atoms:
OP1: (37.860,49.500,117.428)
OP2: (40.409,49.641,117.707)
C3': (38.096,48.195,121.905)
C1': (39.663,46.568,122.578)
C5': (37.951,47.309,119.524)
O4': (39.174,46.214,121.294)
C8: (41.661,47.519,121.308)
O2': (37.771,46.930,123.987)
C6: (44.273,47.689,123.661)
C5: (43.136,47.567,122.840)
C4: (41.987,47.085,123.433)
P: (39.156,48.843,117.743)
C4': (37.984,46.986,120.995)
C2': (38.706,47.602,123.169)
C2: (42.973,46.886,125.389)
N1: (44.151,47.333,124.957)
N3: (41.837,46.723,124.719)
N6: (45.456,48.133,123.229)
N7: (42.917,47.842,121.495)
N9: (41.039,47.044,122.437)
O5': (39.044,48.186,119.188)
O3': (36.826,48.797,122.118)
OP2: (40.409,49.641,117.707)
C3': (38.096,48.195,121.905)
C1': (39.663,46.568,122.578)
C5': (37.951,47.309,119.524)
O4': (39.174,46.214,121.294)
C8: (41.661,47.519,121.308)
O2': (37.771,46.930,123.987)
C6: (44.273,47.689,123.661)
C5: (43.136,47.567,122.840)
C4: (41.987,47.085,123.433)
P: (39.156,48.843,117.743)
C4': (37.984,46.986,120.995)
C2': (38.706,47.602,123.169)
C2: (42.973,46.886,125.389)
N1: (44.151,47.333,124.957)
N3: (41.837,46.723,124.719)
N6: (45.456,48.133,123.229)
N7: (42.917,47.842,121.495)
N9: (41.039,47.044,122.437)
O5': (39.044,48.186,119.188)
O3': (36.826,48.797,122.118)
C2: (46.186,47.882,127.359)
OP1: (52.834,46.878,131.361)
OP2: (52.629,47.445,128.869)
C4: (47.815,48.230,125.739)
O5': (50.617,47.350,130.325)
C3': (48.299,45.851,130.502)
C1': (46.807,47.486,129.724)
O4': (47.745,48.111,130.592)
C5': (49.888,47.510,131.548)
P: (52.178,47.643,130.272)
O2: (44.997,47.767,127.702)
C4': (48.459,47.096,131.348)
C2': (46.869,45.984,130.004)
O2': (45.894,45.614,130.956)
N1: (47.192,47.773,128.330)
N3: (46.532,48.110,126.073)
N4: (48.103,48.444,124.457)
C6: (48.507,47.912,127.976)
C5: (48.859,48.136,126.705)
O3': (48.584,44.651,131.191)
OP1: (52.834,46.878,131.361)
OP2: (52.629,47.445,128.869)
C4: (47.815,48.230,125.739)
O5': (50.617,47.350,130.325)
C3': (48.299,45.851,130.502)
C1': (46.807,47.486,129.724)
O4': (47.745,48.111,130.592)
C5': (49.888,47.510,131.548)
P: (52.178,47.643,130.272)
O2: (44.997,47.767,127.702)
C4': (48.459,47.096,131.348)
C2': (46.869,45.984,130.004)
O2': (45.894,45.614,130.956)
N1: (47.192,47.773,128.330)
N3: (46.532,48.110,126.073)
N4: (48.103,48.444,124.457)
C6: (48.507,47.912,127.976)
C5: (48.859,48.136,126.705)
O3': (48.584,44.651,131.191)
Image (generated by PyMOL):