ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1H:A498:A521

Extra

PDB:
ATOM 1 O3' G A 497 -46.886-106.943 39.270 1.00 41.89 O
ATOM 2 P A A 498 -47.502-106.846 40.743 1.00 43.48 P
ATOM 3 OP1 A A 498 -48.467-107.960 40.873 1.00 66.13 O
ATOM 4 OP2 A A 498 -47.914-105.448 40.979 1.00 51.33 O
ATOM 5 O5' A A 498 -46.313-107.097 41.781 1.00 69.15 O
ATOM 6 C5' A A 498 -46.552-106.758 43.153 1.00 67.31 C
ATOM 7 C4' A A 498 -45.391-107.131 44.050 1.00 69.88 C
ATOM 8 O4' A A 498 -45.341-108.571 44.166 1.00 63.02 O
ATOM 9 C3' A A 498 -44.027-106.679 43.538 1.00 61.05 C
ATOM 10 O3' A A 498 -43.665-105.447 44.155 1.00 49.53 O
ATOM 11 C2' A A 498 -43.100-107.782 44.006 1.00 57.99 C
ATOM 12 O2' A A 498 -42.706-107.515 45.334 1.00 67.19 O
ATOM 13 C1' A A 498 -44.011-109.008 43.947 1.00 64.71 C
ATOM 14 N9 A A 498 -43.984-109.758 42.693 1.00 65.49 N
ATOM 15 C8 A A 498 -45.031-109.960 41.837 1.00 68.55 C
ATOM 16 N7 A A 498 -44.722-110.685 40.785 1.00 69.13 N
ATOM 17 C5 A A 498 -43.380-110.988 40.959 1.00 65.76 C
ATOM 18 C6 A A 498 -42.459-111.733 40.185 1.00 64.16 C
ATOM 19 N6 A A 498 -42.763-112.338 39.032 1.00 66.51 N
ATOM 20 N1 A A 498 -41.197-111.831 40.648 1.00 61.55 N
ATOM 21 C2 A A 498 -40.888-111.226 41.806 1.00 63.72 C
ATOM 22 N3 A A 498 -41.664-110.502 42.621 1.00 61.45 N
ATOM 23 C4 A A 498 -42.912-110.422 42.135 1.00 64.01 C
ATOM 24 P A A 499 -43.091-104.249 43.250 1.00 61.89 P
ATOM 25 OP1 A A 499 -42.962-103.072 44.140 1.00 78.39 O
ATOM 26 OP2 A A 499 -43.888-104.130 42.000 1.00 53.78 O
ATOM 27 O5' A A 499 -41.624-104.765 42.868 1.00 65.46 O
TER

ATOM 1 O3' G B 520 -41.960-114.645 37.212 1.00 62.82 O
ATOM 2 P A B 521 -42.400-116.161 37.448 1.00 55.08 P
ATOM 3 OP1 A B 521 -42.718-116.300 38.886 1.00 65.68 O
ATOM 4 OP2 A B 521 -41.389-117.026 36.800 1.00 61.27 O
ATOM 5 O5' A B 521 -43.752-116.285 36.608 1.00 44.03 O
ATOM 6 C5' A B 521 -44.483-117.499 36.649 1.00 50.16 C
ATOM 7 C4' A B 521 -45.917-117.349 36.165 1.00 53.78 C
ATOM 8 O4' A B 521 -46.749-116.815 37.222 1.00 52.04 O
ATOM 9 C3' A B 521 -46.090-116.406 34.994 1.00 49.20 C
ATOM 10 O3' A B 521 -45.997-117.128 33.791 1.00 44.58 O
ATOM 11 C2' A B 521 -47.506-115.900 35.181 1.00 53.23 C
ATOM 12 O2' A B 521 -48.408-116.819 34.613 1.00 42.07 O
ATOM 13 C1' A B 521 -47.637-115.848 36.701 1.00 55.92 C
ATOM 14 N9 A B 521 -47.276-114.554 37.279 1.00 58.51 N
ATOM 15 C8 A B 521 -46.127-114.249 37.959 1.00 61.44 C
ATOM 16 N7 A B 521 -46.067-113.004 38.366 1.00 61.23 N
ATOM 17 C5 A B 521 -47.260-112.445 37.922 1.00 60.50 C
ATOM 18 C6 A B 521 -47.812-111.139 38.034 1.00 62.72 C
ATOM 19 N6 A B 521 -47.199-110.117 38.659 1.00 58.00 N
ATOM 20 N1 A B 521 -49.027-110.928 37.470 1.00 63.45 N
ATOM 21 C2 A B 521 -49.631-111.949 36.847 1.00 63.53 C
ATOM 22 N3 A B 521 -49.211-113.207 36.684 1.00 58.92 N
ATOM 23 C4 A B 521 -48.012-113.393 37.249 1.00 56.98 C
ATOM 24 P A B 522 -45.277-116.411 32.560 1.00 65.95 P
ATOM 25 OP1 A B 522 -45.179-117.304 31.391 1.00 63.77 O
ATOM 26 OP2 A B 522 -44.055-115.765 33.101 1.00 68.70 O
ATOM 27 O5' A B 522 -46.349-115.283 32.209 1.00 75.00 O
TER

Atoms:
OP1: (-48.467,-107.960,40.873)
OP2: (-47.914,-105.448,40.979)
C3': (-44.027,-106.679,43.538)
C1': (-44.011,-109.008,43.947)
C5': (-46.552,-106.758,43.153)
O4': (-45.341,-108.571,44.166)
C8: (-45.031,-109.960,41.837)
O2': (-42.706,-107.515,45.334)
C6: (-42.459,-111.733,40.185)
C5: (-43.380,-110.988,40.959)
C4: (-42.912,-110.422,42.135)
P: (-47.502,-106.846,40.743)
C4': (-45.391,-107.131,44.050)
C2': (-43.100,-107.782,44.006)
C2: (-40.888,-111.226,41.806)
N1: (-41.197,-111.831,40.648)
N3: (-41.664,-110.502,42.621)
N6: (-42.763,-112.338,39.032)
N7: (-44.722,-110.685,40.785)
N9: (-43.984,-109.758,42.693)
O5': (-46.313,-107.097,41.781)
O3': (-43.665,-105.447,44.155)
OP1: (-42.718,-116.300,38.886)
OP2: (-41.389,-117.026,36.800)
C3': (-46.090,-116.406,34.994)
C1': (-47.637,-115.848,36.701)
C5': (-44.483,-117.499,36.649)
O4': (-46.749,-116.815,37.222)
C8: (-46.127,-114.249,37.959)
O2': (-48.408,-116.819,34.613)
C6: (-47.812,-111.139,38.034)
C5: (-47.260,-112.445,37.922)
C4: (-48.012,-113.393,37.249)
P: (-42.400,-116.161,37.448)
C4': (-45.917,-117.349,36.165)
C2': (-47.506,-115.900,35.181)
C2: (-49.631,-111.949,36.847)
N1: (-49.027,-110.928,37.470)
N3: (-49.211,-113.207,36.684)
N6: (-47.199,-110.117,38.659)
N7: (-46.067,-113.004,38.366)
N9: (-47.276,-114.554,37.279)
O5': (-43.752,-116.285,36.608)
O3': (-45.997,-117.128,33.791)
Image (generated by PyMOL):
PyMOL image
show in jmol