ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQN:02146:02153

Extra

PDB:
ATOM 1 O3' G A2145 59.925 76.950 104.540 1.00 44.01 O
ATOM 2 P A A2146 58.399 77.125 104.060 1.00 44.44 P
ATOM 3 OP1 A A2146 58.337 78.040 102.893 1.00 45.65 O
ATOM 4 OP2 A A2146 57.621 77.447 105.273 1.00 41.70 O
ATOM 5 O5' A A2146 58.000 75.679 103.527 1.00 46.51 O
ATOM 6 C5' A A2146 56.632 75.343 103.247 1.00 46.22 C
ATOM 7 C4' A A2146 56.547 74.482 102.010 1.00 47.07 C
ATOM 8 O4' A A2146 56.759 75.300 100.829 1.00 47.25 O
ATOM 9 C3' A A2146 57.546 73.331 101.916 1.00 47.41 C
ATOM 10 O3' A A2146 56.935 72.229 101.246 1.00 49.34 O
ATOM 11 C2' A A2146 58.633 73.916 101.022 1.00 46.61 C
ATOM 12 O2' A A2146 59.366 72.901 100.362 1.00 43.77 O
ATOM 13 C1' A A2146 57.790 74.741 100.047 1.00 46.03 C
ATOM 14 N9 A A2146 58.464 75.832 99.344 1.00 47.23 N
ATOM 15 C8 A A2146 58.712 77.107 99.797 1.00 47.39 C
ATOM 16 N7 A A2146 59.300 77.878 98.914 1.00 47.68 N
ATOM 17 C5 A A2146 59.459 77.058 97.807 1.00 48.34 C
ATOM 18 C6 A A2146 60.015 77.281 96.534 1.00 48.19 C
ATOM 19 N6 A A2146 60.515 78.447 96.138 1.00 46.72 N
ATOM 20 N1 A A2146 60.031 76.247 95.666 1.00 48.25 N
ATOM 21 C2 A A2146 59.507 75.080 96.051 1.00 47.09 C
ATOM 22 N3 A A2146 58.945 74.748 97.214 1.00 47.93 N
ATOM 23 C4 A A2146 58.956 75.791 98.060 1.00 47.94 C
ATOM 24 P A A2147 56.065 71.168 102.086 1.00 50.99 P
ATOM 25 OP1 A A2147 56.913 70.676 103.206 1.00 48.15 O
ATOM 26 OP2 A A2147 55.463 70.198 101.129 1.00 51.28 O
ATOM 27 O5' A A2147 54.880 72.054 102.676 1.00 48.37 O
TER

ATOM 1 O3' U B2152 59.094 80.324 92.877 1.00 45.25 O
ATOM 2 P A B2153 60.672 80.147 92.644 1.00 43.20 P
ATOM 3 OP1 A B2153 60.893 79.919 91.196 1.00 43.96 O
ATOM 4 OP2 A B2153 61.243 79.193 93.632 1.00 45.64 O
ATOM 5 O5' A B2153 61.207 81.604 92.974 1.00 44.75 O
ATOM 6 C5' A B2153 60.680 82.748 92.284 1.00 43.72 C
ATOM 7 C4' A B2153 60.616 83.927 93.217 1.00 45.33 C
ATOM 8 O4' A B2153 59.618 83.686 94.245 1.00 45.83 O
ATOM 9 C3' A B2153 61.898 84.194 93.989 1.00 45.74 C
ATOM 10 O3' A B2153 62.815 84.944 93.198 1.00 49.00 O
ATOM 11 C2' A B2153 61.384 84.960 95.199 1.00 45.72 C
ATOM 12 O2' A B2153 61.097 86.311 94.908 1.00 46.59 O
ATOM 13 C1' A B2153 60.067 84.226 95.479 1.00 44.55 C
ATOM 14 N9 A B2153 60.216 83.122 96.429 1.00 43.23 N
ATOM 15 C8 A B2153 60.237 81.779 96.140 1.00 43.16 C
ATOM 16 N7 A B2153 60.363 81.013 97.197 1.00 42.73 N
ATOM 17 C5 A B2153 60.438 81.909 98.253 1.00 41.83 C
ATOM 18 C6 A B2153 60.563 81.725 99.642 1.00 40.76 C
ATOM 19 N6 A B2153 60.638 80.528 100.223 1.00 38.68 N
ATOM 20 N1 A B2153 60.605 82.826 100.422 1.00 39.02 N
ATOM 21 C2 A B2153 60.524 84.023 99.836 1.00 40.06 C
ATOM 22 N3 A B2153 60.397 84.325 98.544 1.00 41.02 N
ATOM 23 C4 A B2153 60.357 83.211 97.796 1.00 41.07 C
ATOM 24 P U B2154 64.402 84.727 93.373 1.00 46.85 P
ATOM 25 OP1 U B2154 65.011 85.312 92.154 1.00 46.00 O
ATOM 26 OP2 U B2154 64.685 83.314 93.728 1.00 48.81 O
ATOM 27 O5' U B2154 64.772 85.643 94.621 1.00 46.04 O
TER

Atoms:
OP1: (58.337,78.040,102.893)
OP2: (57.621,77.447,105.273)
C3': (57.546,73.331,101.916)
C1': (57.790,74.741,100.047)
C5': (56.632,75.343,103.247)
O4': (56.759,75.300,100.829)
C8: (58.712,77.107,99.797)
O2': (59.366,72.901,100.362)
C6: (60.015,77.281,96.534)
C5: (59.459,77.058,97.807)
C4: (58.956,75.791,98.060)
P: (58.399,77.125,104.060)
C4': (56.547,74.482,102.010)
C2': (58.633,73.916,101.022)
C2: (59.507,75.080,96.051)
N1: (60.031,76.247,95.666)
N3: (58.945,74.748,97.214)
N6: (60.515,78.447,96.138)
N7: (59.300,77.878,98.914)
N9: (58.464,75.832,99.344)
O5': (58.000,75.679,103.527)
O3': (56.935,72.229,101.246)
OP1: (60.893,79.919,91.196)
OP2: (61.243,79.193,93.632)
C3': (61.898,84.194,93.989)
C1': (60.067,84.226,95.479)
C5': (60.680,82.748,92.284)
O4': (59.618,83.686,94.245)
C8: (60.237,81.779,96.140)
O2': (61.097,86.311,94.908)
C6: (60.563,81.725,99.642)
C5: (60.438,81.909,98.253)
C4: (60.357,83.211,97.796)
P: (60.672,80.147,92.644)
C4': (60.616,83.927,93.217)
C2': (61.384,84.960,95.199)
C2: (60.524,84.023,99.836)
N1: (60.605,82.826,100.422)
N3: (60.397,84.325,98.544)
N6: (60.638,80.528,100.223)
N7: (60.363,81.013,97.197)
N9: (60.216,83.122,96.429)
O5': (61.207,81.604,92.974)
O3': (62.815,84.944,93.198)
Image (generated by PyMOL):
PyMOL image
show in jmol